BAC Information

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BAC

Clone NameB6Ng01-283E15
Chromosome15 (Build37)
Map Location 99,233,724 - 99,388,704
singlet/doubletdoublet
Overlap geneTegt, C230021P08Rik, 4930556P03Rik, Faim2, LOC545137
Upstream gene1700031M16Rik, LOC100042818, Olfr282, LOC629549, Olfr281, Olfr240-ps1, GA_x5J8B7W76D0-7895713-7896429, Lalba, Olfr234, Olfr278-ps1, 2310037I24Rik, LOC100043418, Ccnt1, 4930415O20Rik, Adcy6, Cacnb3, Ddx23, Rnd1, Ccdc65, Fkbp11, Arf3, 5830427D03Rik, Wnt10b, Wnt1, Ddn, Prkag1, Mll2, Rhebl1, Dhh, Lmbr1l, Tuba1b, Tuba1a, EG668092, Tuba1c, Prph1, Troap, C1ql4, 2810451A06Rik, Spats2, Kcnh3, Mcrs1, EG545136, Prpf40b, Fmnl3
Downstream geneAqp2, Aqp5, Aqp6, Racgap1, LOC100043473, Accn2, Smarcd1, Gpd1, 2310016M24Rik, Lass5, Lima1, LOC100043481, LOC100042918, 1700030F18Rik, Gm920, D330037H05Rik, 4930478M13Rik, Dip2b, Atf1, 4930478A21Rik, EG432981, Mettl7a, ENSMUSG00000058057, LOC554292, Ubie, Yghl1-4, Slc11a2, EG432982, Letmd1, BC035295, Tcfcp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283E15.bB6Ng01-283E15.g
ACCGA082289GA082290
length645869
definitionB6Ng01-283E15.b B6Ng01-283E15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,233,724 - 99,234,368)(99,387,837 - 99,388,704)
sequence
gaattcatccgtgcttcctaccactgagttgtacactagcctggtgtgta
ctcttagataagctgcctcttatgtagtcctggctggaagtcctgcctgc
ttctgctcccaagtgttgcaattaaaggcatataccaccatgacctgccc
tgttttaagtttttgttgctgattttgccaaaaacaacctggtgctgaag
tgctatctagtatgacggttgatttacttcggggagaaagtatgtttgtt
ttaatcagctctgggaatcaacaatatatggcaactaattgtccttagaa
agaaacacatacagcaaggctatgcgttaatcatttgtcactgaccagag
cattgcagaaacctgtttcctggagcgcagttcctccttcaatccacttg
gacttaggactgctctcagcagtgagaagggagctgtgcctctaagggca
ggaccttcagggccactgatcacctcagtcctcttaatgtctgtgggcag
ggtttcctttaaaaaaattatttttgtcaacaaaactaatgttactgtaa
gaaattcgaaagtagctgagcgactttaaacccagaagatagacggtagt
gtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattctggatctgctacaaggcagacgaacctggtgacagcaggccaaa
gccaatcacaaaggcacaccgattccacttatatggaaaatcctgggcag
gcaaacccagtgagtaagtaactcctaggagacagaggaagggagaccag
gctatgactgccagcatgtatggagggttttttaagggtcatgaagaatg
ttctggaaagagagtgtagtgatggttgctctgctgtataaaaaaaaccc
aaaccctctaaattatatagcttatttgtttgttgagttgggagctctgg
tagcccaggctgtcctcaaacttgctatctagctgagcctaaccatgaac
tcttaaccttcctgtttctacttctaaaacccatgtgctgccccacacag
ccttgaacagtacagggcaatgtttacattgtgtgaattttattttgcta
aaagaaaaaaaaagattattcatgtctagcaggttcagtttggaaataat
ttcttaaaaaaaaaaaaaaaaaaagagaaagcattccttaggcttgttcc
tggaggatgcttagtgggaggaaggatgggtgagtgtagccagggttggg
taatgtgtaaacctgcagagggccttaggggctagcctgggtcacaggta
agacaggaggagcaggcaagcgttctggagtgatccagctggcattgtct
ggaggcattaccatgtgtcttagtcagggtttctattcctgcacaaacat
catgaccaaggagcaagttggggaggaaagggtttatttctgcttacact
tccatactgttgttcatccccaaatgaagtcaggactggaacttcagcac
ggccagaagcaggagctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_99233724_99234368
seq2: B6Ng01-283E15.b_49_693

seq1  GAATTCATCCGTGCTTCCTACCACTGAGTTGTACACTAGCCTGGTGTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCGTGCTTCCTACCACTGAGTTGTACACTAGCCTGGTGTGTA  50

seq1  CTCTTAGATAAGCTGCCTCTTATGTAGTCCTGGCTGGAAGTCCTGCCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAGATAAGCTGCCTCTTATGTAGTCCTGGCTGGAAGTCCTGCCTGC  100

seq1  TTCTGCTCCCAAGTGTTGCAATTAAAGGCATATACCACCATGACCTGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTCCCAAGTGTTGCAATTAAAGGCATATACCACCATGACCTGCCC  150

seq1  TGTTTTAAGTTTTTGTTGCTGATTTTGCCAAAAACAACCTGGTGCTGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAAGTTTTTGTTGCTGATTTTGCCAAAAACAACCTGGTGCTGAAG  200

seq1  TGCTATCTAGTATGACGGTTGATTTACTTCGGGGAGAAAGTATGTTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATCTAGTATGACGGTTGATTTACTTCGGGGAGAAAGTATGTTTGTT  250

seq1  TTAATCAGCTCTGGGAATCAACAATATATGGCAACTAATTGTCCTTAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCAGCTCTGGGAATCAACAATATATGGCAACTAATTGTCCTTAGAA  300

seq1  AGAAACACATACAGCAAGGCTATGCGTTAATCATTTGTCACTGACCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACACATACAGCAAGGCTATGCGTTAATCATTTGTCACTGACCAGAG  350

seq1  CATTGCAGAAACCTGTTTCCTGGAGCGCAGTTCCTCCTTCAATCCACTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCAGAAACCTGTTTCCTGGAGCGCAGTTCCTCCTTCAATCCACTTG  400

seq1  GACTTAGGACTGCTCTCAGCAGTGAGAAGGGAGCTGTGCCTCTAAGGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAGGACTGCTCTCAGCAGTGAGAAGGGAGCTGTGCCTCTAAGGGCA  450

seq1  GGACCTTCAGGGCCACTGATCACCTCAGTCCTCTTAATGTCTGTGGGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTTCAGGGCCACTGATCACCTCAGTCCTCTTAATGTCTGTGGGCAG  500

seq1  GGTTTCCTTTAAAAAAATTATTTTTGTCAACAAAACTAATGTTACTGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCCTTTAAAAAAATTATTTTTGTCAACAAAACTAATGTTACTGTAA  550

seq1  GAAATTCGAAAGTAGCTGAGCGACTTTAAACCCAGAAGATAGACGGTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCGAAAGTAGCTGAGCGACTTTAAACCCAGAAGATAGACGGTAGT  600

seq1  GTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  645
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  645

seq1: chr15_99387837_99388704
seq2: B6Ng01-283E15.g_65_933 (reverse)

seq1  TCAGCTCCTGCTTCCTGCCCTGCTTGAGTTCCAGTCCTGACTTCATTTGG  50
      ||||||||||||||  ||| ||||  ||||||||||||||||||||||||
seq2  TCAGCTCCTGCTTCTGGCCGTGCTGAAGTTCCAGTCCTGACTTCATTTGG  50

seq1  TGATGAACAGCAGTATGGAAGTGTAAGCAG-AATAAACCCTTTCCTCCCC  99
       |||||||| |||||||||||||||||||| |||||||||||||||||||
seq2  GGATGAACAACAGTATGGAAGTGTAAGCAGAAATAAACCCTTTCCTCCCC  100

seq1  AACTTGCTCCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGCTCCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAA  150

seq1  GACACATGGTAATGCCTCCAGACAATGCCAGCTGGATCACTCCAGAACGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATGGTAATGCCTCCAGACAATGCCAGCTGGATCACTCCAGAACGC  200

seq1  TTGCCTGCTCCTCCTGTCTTACCTGTGACCCAGGCTAGCCCCTAAGGCCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGCTCCTCCTGTCTTACCTGTGACCCAGGCTAGCCCCTAAGGCCC  250

seq1  TCTGCAGGTTTACACATTACCCAACCCTGGCTACACTCACCCATCCTTCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGGTTTACACATTACCCAACCCTGGCTACACTCACCCATCCTTCC  300

seq1  TCCCACTAAGCATCCTCCAGGAACAAGCCTAAGGAATGCTTTCTCTTTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTAAGCATCCTCCAGGAACAAGCCTAAGGAATGCTTTCTCTTTTT  350

seq1  TTTTTTTTTTTTTTAAGAAATTATTTCCAAACTGAACCTGCTAGACATGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTAAGAAATTATTTCCAAACTGAACCTGCTAGACATGA  400

seq1  ATAATCTTTTTTTTTCTTTTAGCAAAATAAAATTCACACAATGTAAACAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTTTTTTTTTCTTTTAGCAAAATAAAATTCACACAATGTAAACAT  450

seq1  TGCCCTGTACTGTTCAAGGCTGTGTGGGGCAGCACATGGGTTTTAGAAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGTACTGTTCAAGGCTGTGTGGGGCAGCACATGGGTTTTAGAAGT  500

seq1  AGAAACAGGAAGGTTAAGAGTTCATGGTTAGGCTCAGCTAGATAGCAAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAGGAAGGTTAAGAGTTCATGGTTAGGCTCAGCTAGATAGCAAGT  550

seq1  TTGAGGACAGCCTGGGCTACCAGAGCTCCCAACTCAACAAACAAATAAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGACAGCCTGGGCTACCAGAGCTCCCAACTCAACAAACAAATAAGC  600

seq1  TATATAATTTAGAGGGTTTGGGTTTTTTTTATACAGCAGAGCAACCATCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAATTTAGAGGGTTTGGGTTTTTTTTATACAGCAGAGCAACCATCA  650

seq1  CTACACTCTCTTTCCAGAACATTCTTCATGACCCTTAAAAAACCCTCCAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACTCTCTTTCCAGAACATTCTTCATGACCCTTAAAAAACCCTCCAT  700

seq1  ACATGCTGGCAGTCATAGCCTGGTCTCCCTTCCTCTGTCTCCTAGGAGTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTGGCAGTCATAGCCTGGTCTCCCTTCCTCTGTCTCCTAGGAGTT  750

seq1  ACTTACTCACTGGGTTTGCCTGCCCAGGATTTTCCATATAAGTGGAATCG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACTCACTGGGTTTGCCTGCCCAGGATTTTCCATATAAGTGGAATCG  800

seq1  GTGTGCCTTTGTGATTGGCTTTGGCCTGCTGTCACCAGGTTCGTCTGCCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCTTTGTGATTGGCTTTGGCCTGCTGTCACCAGGTTCGTCTGCCT  850

seq1  TGTAGCAGATCCAGAATTC  868
      |||||||||||||||||||
seq2  TGTAGCAGATCCAGAATTC  869