BAC Information

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BAC

Clone NameB6Ng01-283G07
Chromosome15 (Build37)
Map Location 19,743,106 - 19,744,214
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh10, EG666857, EG666875, LOC621884, LOC100040265
Downstream geneAcot10, LOC100040302
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283G07.bB6Ng01-283G07.g
ACCGA082366GA082367
length1,1011,165
definitionB6Ng01-283G07.b B6Ng01-283G07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctacaagtgttctccttttccaaacccaaatctacaagcttta
ttaggactcaatgagtactatgttgacttattagaactaagtactttcca
ggatgtccatgggggcacttttaattgttatatgtaactgaatactgatt
ttcttcattcccggtgacacacttattttgtgcctttagtaaccatggcc
atatgtgtctctaattaattacaggttatcttctcaactggtacctgaca
cagctgttccacacaagccccaaagaaactacttaagcagttttgtcttc
attaacttctgtaaccatgaggacatttacatttttggagagcatgggtt
taattacacattacaaagtatattcttttctaatcatcatgagcattaat
atttaattggtgaaattgaaaccttacacatagatgctgtaatttgcttc
actttcaattacaagagttgggagatttcatggctgtttctcttccagtt
gttctagtacttggaattcttagacacattcatcagaggacataatgatg
ctcagttgactgtcacacagttttcttttcgttctacagacactgtgtac
aactctgtttccgtgtgcttctgatatgccttgataaggagagcggagag
gtcgggggaaggttagataagtaaaaattactttcaacaagaaggctttc
agggaagaagttgaacacatatgctaagcagaccaaaacatgaggataca
gtagatgcagttaacgacttgtgcatctacctataaatacatctaccaca
cattccttcatgaactttaacttttaaactttgtcttccacattgtattt
aatatgttaatttctactttgtttgctgataatttgaaagagagatttcc
atcaccaggcatataggaattaaaggagtacttttactgaaatatagcat
gtgcatatcctcttacaaatatgcatataaaatatatgcccacacatatg
tacaatatacatgcactaaatcatagtgtacatgtatatacatatatatg
gtataatagtaattttatgtgccatatgtgtaaatttacacatacattaa
a

gaattctcacctaaggaatactgaatggctgagaagcacctgaaaaaatg
gttcagcatccttaatcatcagggaaatgcacatcaaaacaaccctgaaa
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggtgaggatgtggagaaagaggaagactcttccattgttggt
gggattgcaagcttgcacaaccactctggaaatcagtctggcagttcctc
agaaaactggatatagtataaccggaggatcctgcaatacctctcctgag
catataaccagaagaagttccaaccggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaatagagcaatggatacagaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatgtatggacctggagtgcatcatcctgagtgaggtaacccaatcacaa
aagaattcacacaatatgtactcactgataagtggatattagcccagaaa
cttaggatacccaagatataagatacaatttgctaaacacatgacactca
agaagaacgaagaccaaagtgtggacactttgccccttcttagaattggg
aacaaaacacccatggaaggagttacagagacaaagtttggagctgtgtc
aaaaggatggaccatctagagcctgccatatccagggtttcaacccatat
tcagcttccaaacgctgacaccattgcatacactagcaagtgttggctga
aaggacccagatatatctgtctcttgtgagactaggtcggggccctagca
aacacataagtggatgctcacagtcagctattggatggatcacagggccc
caatggaggagctagagaaagtagccaagagctaatggatctgcaactct
atagtagaacaacattatgactaccagtacccggagctcttgacttctta
tctgcatatgttatcaaagtgcctagtagcaatcactgaagagaagccaa
ttgacttgcactttatatgccagtacgggaacgtcagcaaaaattggaac
tgggtgtggtcatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_19743106_19744214
seq2: B6Ng01-283G07.b_44_1144 (reverse)

seq1  TTTATATGTATGTGTAATATTACACATAT-GCACATAAAATTTTACATAT  49
      |||| ||||||||||||  |||||||||| ||||||||||  |||| |||
seq2  TTTA-ATGTATGTGTAAATTTACACATATGGCACATAAAA--TTAC-TAT  46

seq1  ATATA-CATATATATGTATATACATGTACACTATGATTTTAAGTTGCATG  98
       |||| |||||||||||||||||||||||||||||||||  || ||||||
seq2  -TATACCATATATATGTATATACATGTACACTATGATTT--AG-TGCATG  92

seq1  TATAATTGTACATATGTGTGGGCATAATATTTTATATGCATATTTGTAAG  148
      ||| ||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TAT-ATTGTACATATGTGTGGGCAT-ATATTTTATATGCATATTTGTAAG  140

seq1  AGGATATGCACATGCTATATTTCAGTAAAAGTACTCCTTTAATTCCTATA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATGCACATGCTATATTTCAGTAAAAGTACTCCTTTAATTCCTATA  190

seq1  TGCCTGGTGATGGAAATCTCTCTTTCAAATTATCAGCAAACAAAGTAGAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGTGATGGAAATCTCTCTTTCAAATTATCAGCAAACAAAGTAGAA  240

seq1  ATTAACATATTAAATACAATGTGGAAGACAAAGTTTAAAAGTTAAAGTTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACATATTAAATACAATGTGGAAGACAAAGTTTAAAAGTTAAAGTTC  290

seq1  ATGAAGGAATGTGTGGTAGATGTATTTATAGGTAGATGCACAAGTCGTTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGAATGTGTGGTAGATGTATTTATAGGTAGATGCACAAGTCGTTA  340

seq1  ACTGCATCTACTGTATCCTCATGTTTTGGTCTGCTTAGCATATGTGTTCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATCTACTGTATCCTCATGTTTTGGTCTGCTTAGCATATGTGTTCA  390

seq1  ACTTCTTCCCTGAAAGCCTTCTTGTTGAAAGTAATTTTTACTTATCTAAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTCCCTGAAAGCCTTCTTGTTGAAAGTAATTTTTACTTATCTAAC  440

seq1  CTTCCCCCGACCTCTCCGCTCTCCTTATCAAGGCATATCAGAAGCACACG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCCGACCTCTCCGCTCTCCTTATCAAGGCATATCAGAAGCACACG  490

seq1  GAAACAGAGTTGTACACAGTGTCTGTAGAACGAAAAGAAAACTGTGTGAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGAGTTGTACACAGTGTCTGTAGAACGAAAAGAAAACTGTGTGAC  540

seq1  AGTCAACTGAGCATCATTATGTCCTCTGATGAATGTGTCTAAGAATTCCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAACTGAGCATCATTATGTCCTCTGATGAATGTGTCTAAGAATTCCA  590

seq1  AGTACTAGAACAACTGGAAGAGAAACAGCCATGAAATCTCCCAACTCTTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTAGAACAACTGGAAGAGAAACAGCCATGAAATCTCCCAACTCTTG  640

seq1  TAATTGAAAGTGAAGCAAATTACAGCATCTATGTGTAAGGTTTCAATTTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGAAAGTGAAGCAAATTACAGCATCTATGTGTAAGGTTTCAATTTC  690

seq1  ACCAATTAAATATTAATGCTCATGATGATTAGAAAAGAATATACTTTGTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTAAATATTAATGCTCATGATGATTAGAAAAGAATATACTTTGTA  740

seq1  ATGTGTAATTAAACCCATGCTCTCCAAAAATGTAAATGTCCTCATGGTTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTAATTAAACCCATGCTCTCCAAAAATGTAAATGTCCTCATGGTTA  790

seq1  CAGAAGTTAATGAAGACAAAACTGCTTAAGTAGTTTCTTTGGGGCTTGTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTTAATGAAGACAAAACTGCTTAAGTAGTTTCTTTGGGGCTTGTG  840

seq1  TGGAACAGCTGTGTCAGGTACCAGTTGAGAAGATAACCTGTAATTAATTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACAGCTGTGTCAGGTACCAGTTGAGAAGATAACCTGTAATTAATTA  890

seq1  GAGACACATATGGCCATGGTTACTAAAGGCACAAAATAAGTGTGTCACCG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACACATATGGCCATGGTTACTAAAGGCACAAAATAAGTGTGTCACCG  940

seq1  GGAATGAAGAAAATCAGTATTCAGTTACATATAACAATTAAAAGTGCCCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGAAGAAAATCAGTATTCAGTTACATATAACAATTAAAAGTGCCCC  990

seq1  CATGGACATCCTGGAAAGTACTTAGTTCTAATAAGTCAACATAGTACTCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGACATCCTGGAAAGTACTTAGTTCTAATAAGTCAACATAGTACTCA  1040

seq1  TTGAGTCCTAATAAAGCTTGTAGATTTGGGTTTGGAAAAGGAGAACACTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTCCTAATAAAGCTTGTAGATTTGGGTTTGGAAAAGGAGAACACTT  1090

seq1  GTAGAGAATTC  1109
      |||||||||||
seq2  GTAGAGAATTC  1101


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