BAC Information

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BAC

Clone NameB6Ng01-284I23
Chromosome15 (Build37)1 (Build37)
Map Location 31,380,625 - 31,380,665186,857,185 - 186,858,266
singlet/doubletsingletsinglet
Overlap geneRopn1l
Upstream geneCtnnd2, 9630009A06Rik, Dap, EG625796, 5730557B15Rik, LOC622810
Downstream geneMarch6, Cmbl, Cct5, A930016P21Rik, LOC667231, Tas2r119, 0610007N19Rik, Sema5a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284I23.bB6Ng01-284I23.g
ACCGA083230GA083231
length3791,079
definitionB6Ng01-284I23.b B6Ng01-284I23.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(31,380,625 - 31,380,665)(186,857,185 - 186,858,266)
sequence
ttctccctggttgatgcctataatctagaaacttggtctcttcacagtgc
tccacatttcctgtgttaattcatcacatttccattatctgctttgtctc
catgtcctgatattctgtcctcagcatggtacattctatttgtaagactt
cccctagagttttctggtggggtagttgggttttcagttccatctttatt
taagcttgagttctcttcagtatttctatctctctggtgaactccatttt
caaatactggattgtttccagcagtcttacatttgtgttttcctgggcat
cactcaggtctttattctctttaacttcttttttctttatgtccattaag
gtgtgtgtgtgtgtgtgtgtgtgtgtgtt

gaattccagacccaccagggactatagaaagggggggccttagacaaatt
ccttccaaggctattatgatgttccagggaggttttcagatttctccagc
ttcacgtctcataggtcagaacttggacacatgcccacagagagctaagt
ggaggctgtggctgggaaatggcatattttgttgaacacccatgaatctc
gtcaaaactcaggattggggtctctcattaacaaagaggagtgaatagaa
aggaggaggttacaggggggctcctctgcagtgactaagaatgggtggaa
agtttaatttgttattttcaggttgtcccagtgttccatagttataatca
gcaacctgacaaggtacggtctcacatgcagcagtggcatggatgtcatg
ggaataaccaatggctttccagttgtattaaaagctctcttcccataaag
aggttcattcctattactgtcagtcttgccaagaaacaaacacgtggcta
agggcatgatagaacctaggggagaaaccgctacttttcattatttttat
aactgggatgattatctagaaaatgatatacacgagaagactgggtggca
aacaatagatgaacaattttctacttgattaaaatattactttgagcaat
caattaaatcaattaaagtcagtcaattaaaatattgggttacacaagtg
tggtgtaacttgtctataattttaacagttgagaggtgaaagcagaaaga
gtaggaatccaaccaggggtaatctcagctacatagtgagttcaaaggct
atcctgggctagatgaagccctgtcctaagacacacacacacacacacac
aattatatatcatatatatcatatgccaaaaatataataaatatgtatgt
tctagtttaatttgaggttccactctagtgtaatatttactttcccaaac
tggaagaaaatttaagtgcaactgttattaaaataatttttcagacaggt
ttctctgtgtagccctgactgcctttggatctgatgtagacagggttggg
cttggaatcagagatccaccctgctctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_31380625_31380665
seq2: B6Ng01-284I23.b_395_434 (reverse)

seq1  ACACACACACACACACACACACACACACCTTCAATGTACAT  41
      ||||||||||||||||||||||||||||||| |||| ||||
seq2  ACACACACACACACACACACACACACACCTT-AATGGACAT  40


seq1: chr1_186857185_186858266
seq2: B6Ng01-284I23.g_66_1144

seq1  GAATTCCAGACCCACCAGGGACTATAGAAAGGGGGGGCCTTAGACAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGACCCACCAGGGACTATAGAAAGGGGGGGCCTTAGACAAATT  50

seq1  CCTTCCAAGGCTATTATGATGTTCCAGGGAGGTTTTCAGATTTCTCCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCAAGGCTATTATGATGTTCCAGGGAGGTTTTCAGATTTCTCCAGC  100

seq1  TTCACGTCTCATAGGTCAGAACTTGGACACATGCCCACAGAGAGCTAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACGTCTCATAGGTCAGAACTTGGACACATGCCCACAGAGAGCTAAGT  150

seq1  GGAGGCTGTGGCTGGGAAATGGCATATTTTGTTGAACACCCATGAATCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTGTGGCTGGGAAATGGCATATTTTGTTGAACACCCATGAATCTC  200

seq1  GTCAAAACTCAGGATTGGGGTCTCTCATTAACAAAGAGGAGTGAATAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAACTCAGGATTGGGGTCTCTCATTAACAAAGAGGAGTGAATAGAA  250

seq1  AGGAGGAGGTTACAGGGGGGCTCCTCTGCAGTGACTAAGAATGGGTGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAGGTTACAGGGGGGCTCCTCTGCAGTGACTAAGAATGGGTGGAA  300

seq1  AGTTTAATTTGTTATTTTCAGGTTGTCCCAGTGTTCCATAGTTATAATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAATTTGTTATTTTCAGGTTGTCCCAGTGTTCCATAGTTATAATCA  350

seq1  GCAACCTGACAAGGTACGGTCTCACATGCAGCAGTGGCATGGATGTCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCTGACAAGGTACGGTCTCACATGCAGCAGTGGCATGGATGTCATG  400

seq1  GGAATAACCAATGGCTTTCCAGTTGTATTAAAAGCTCTCTTCCCATAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAACCAATGGCTTTCCAGTTGTATTAAAAGCTCTCTTCCCATAAAG  450

seq1  AGGTTCATTCCTATTACTGTCAGTCTTGCCAAGAAACAAACACGTGGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCATTCCTATTACTGTCAGTCTTGCCAAGAAACAAACACGTGGCTA  500

seq1  AGGGCATGATAGAACCTAGGGGAGAAACCGCTACTTTTCATTATTTTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATGATAGAACCTAGGGGAGAAACCGCTACTTTTCATTATTTTTAT  550

seq1  AACTGGGATGATTATCTAGAAAATGATATACACGAGAAGACTGGGTGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGGATGATTATCTAGAAAATGATATACACGAGAAGACTGGGTGGCA  600

seq1  AACAATAGATGAACAATTTTCTACTTGATTAAAATATTACTTTGAGCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATAGATGAACAATTTTCTACTTGATTAAAATATTACTTTGAGCAAT  650

seq1  CAATTAAATCAATTAAAGTCAGTCAATTAAAATATTGGGTTACACAAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAAATCAATTAAAGTCAGTCAATTAAAATATTGGGTTACACAAGTG  700

seq1  TGGTGTAACTTGTCTATAATTTTAACAGTTGAGAGGTGAAAGCAGAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTAACTTGTCTATAATTTTAACAGTTGAGAGGTGAAAGCAGAAAGA  750

seq1  GTAGGAATCCAACCAGGGGTAATCTCAGCTACATAGTGAGTTC-AAGGCT  799
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GTAGGAATCCAACCAGGGGTAATCTCAGCTACATAGTGAGTTCAAAGGCT  800

seq1  ATCCTGGGCTAGATGAAGCCCTGTCCTAAGACACACACACACACACACAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGGGCTAGATGAAGCCCTGTCCTAAGACACACACACACACACACAC  850

seq1  AATTATATATCATATATATCATATGCCAAAAATATAATAAATATGTATGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATATATCATATATATCATATGCCAAAAATATAATAAATATGTATGT  900

seq1  TCTAGTTTTAATTTGAGGTTCCACTCTAGTGTAATATTTAC-TTCCCAAA  948
      ||||| ||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCTAG-TTTAATTTGAGGTTCCACTCTAGTGTAATATTTACTTTCCCAAA  949

seq1  CTGGAAGAAAATTTAAGTGCAACTGTTATTAAATAATTTTTTCAAGACAG  998
      |||||||||||||||||||||||||||||||||  | |||||| ||||| 
seq2  CTGGAAGAAAATTTAAGTGCAACTGTTATTAAAATAATTTTTC-AGACA-  997

seq1  GGTTTCTCTGTGTAGCCCTGACTGCC-TTGGATCTTGATTTGTAGACCAG  1047
      |||||||||||||||||||||||||| ||||||| |||  |||||||  |
seq2  GGTTTCTCTGTGTAGCCCTGACTGCCTTTGGATC-TGA--TGTAGACAGG  1044

seq1  GTTGGCCTTGAATTCAGAGATCCACCCGCCTCTGC  1082
      ||||| |||| | ||||||||||||||  ||||||
seq2  GTTGGGCTTGGAATCAGAGATCCACCCTGCTCTGC  1079


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