BAC Information

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BAC

Clone NameB6Ng01-284J10
Chromosome15 (Build37)
Map Location 15,520,936 - 15,638,017
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040024, LOC100040033, LOC100040046
Downstream geneEG239341, LOC100040087, LOC624183, LOC100040119
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284J10.bB6Ng01-284J10.g
ACCGA083252GA083253
length1,1111,090
definitionB6Ng01-284J10.b B6Ng01-284J10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,520,936 - 15,521,452)(15,636,940 - 15,638,017)
sequence
gaattctctgtttagatctgcctgtggcccccatgttttaatttaattat
tttgtctattgatatctagtttattatttattgggtattttgtttattta
catttcaaatagtatctcccttcccattttcctctccacaaacccctctc
ccagaagtcctcctgtcaaaaggaaacacagggacaaacagtagagatct
agtttcttcagttctttatatatttttaatatcagctttcctcatattca
aagttgatgaaaatcttgtccaatactctaggctattggtttatcaaatg
gatggtttccttggctaacagaatcttttcaggtttatttcaatgtcatg
taggttccatttattaattgctaagtttggtgcctgcactatcatgttca
gttcataaaatcatctcctatgccaatgtgttcaagggtattttcccatt
tcttttcaattgggttcagtgtgtctgtattaaagtttgatcctcttgga
cttgtgttttctgcaggataataatgatgcatcagtttgcactgtttttc
atatagacatccagttttaccagcaccatttgctgaaaaagctgcttttc
ttccagtatgtttatttctggcttctttatcaaaaatcatgtctccatat
gtgtgttgattgatgtctggatctttgcttctactcagttgatcaatact
gtatatttttatgagcacattatgtcatttttactactatagcgcttggt
acacatgaaatcaggaatgatgttatctccctggattttcattgttcagg
gttgtcttagatatcttggtgtcacttttgttttgcttttgttccgattt
catatacagttcagaattttcctttttaagtccatgaagaacagtgttgg
aattttgatggggattaggttgaatctaattagactgcatttcataagat
ggccatttttgctatgtgaatcctacatgagcatggagatcttccatcta
tgatagcttttttatttcttcagcaacactatgttttactatactatctt
ccctgctggataagttacttcaggaaatttatatcatttgagcatagctc
agtcttaaata
gaattccaggatgggtgatctctatgttaatctgtggggacaaagcacat
tatggggaattccaggatgggtgatctctatgttaatatgtggggacatt
gaagaattattaccaggggtggaaactattgctgaggaagactggtaatt
attgctgaggtctggaaactgctactgacccattgtctctgcctcaggcc
aggtggcgggtcagtctctgatggcatggcagtttctgattagctgcctg
aagcctgggttttttcctgcctggattttagcctagactcccaaccaact
accttgaagcctgccatggagtcagccttgtcttctgaaagtgatgctac
aaaaagtgttccattgtctcattcctgattttagggattaccatcatgcc
aagtcgctgaactgccttcaaagtgtgtgaaaaccacatgcttctcatgg
ggctcagtctgtcactcttctgtcaacagggctgtctggtttgtcttaga
ggtgtgaaatcaaagtatttttctgtttttttgagccaaaacactggaac
tatatacctcttttatacttctctgcacatcctttcctttgttctatgct
atccagctgttatatctctcatattcttgattctcaaacctcacttttat
ttcaaactgcacaataatcttttttaatacacttgctcctcacattccca
gagtcacccaaaggaaatcagtaatccgacatctcactttggatgtcttc
attattttcacaagaaaacttgtaaaatgaatatattttaaccctgcagc
atgaattcagacagttttgatacatagtactccagaggtagaagccaaga
gattttttgattctatacaaaggaaaatatctacttaccatgttgagagc
atcgtgtcaaattcagtaacaaaattaaatgaaccggaaatggaatgtgt
caggaaatattttagggccaaataatttaaaggcaaaacatttcaaacat
ttactccagtctttgattttcagaaggctaggatcatcaagtatgagcaa
tttaccaagcctactagtagatatggagtaacctttgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_15520936_15521452
seq2: B6Ng01-284J10.b_657_1157

seq1  TTTATTTCTGGCTTCTTTATCAAAAATCATGTCTCCATATGTGTGTTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCTGGCTTCTTTATCAAAAATCATGTCTCCATATGTGTGTTGAT  50

seq1  TGATGTCTGGATCTTTGCTTCTACTCAGTTGATCAATACTGTATATTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCTGGATCTTTGCTTCTACTCAGTTGATCAATACTGTATATTTTT  100

seq1  ATGAGCACATTATGTCATTTTTACTACTATAGCGCTTGGTACACATGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCACATTATGTCATTTTTACTACTATAGCGCTTGGTACACATGAAA  150

seq1  TCAGGAATGATGTTATCTCCCTGGATTTTCATTGTTCAGGGTTGTCTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAATGATGTTATCTCCCTGGATTTTCATTGTTCAGGGTTGTCTTAG  200

seq1  ATATCTTGGTGTCACTTTTGTTTTTGCTTTTGTTCCGATTTCATATACAG  250
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATATCTTGGTGTCACTTTTG-TTTTGCTTTTGTTCCGATTTCATATACAG  249

seq1  TTCAGAATTTTCCTTTTTAAGTCCATGAAGAACAGTGTTGGAATTTTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAATTTTCCTTTTTAAGTCCATGAAGAACAGTGTTGGAATTTTGAT  299

seq1  GGGGATTAGGTTGAATCTAATTAGACTGCATTTCATAAGATGGCCATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATTAGGTTGAATCTAATTAGACTGCATTTCATAAGATGGCCATTTT  349

seq1  TGCTATGTGAATCCTACATGAGCATGGAGATCTTTCCATCTTATGATAGC  400
      |||||||||||||||||||||||||||||||| ||||||| |||||||||
seq2  TGCTATGTGAATCCTACATGAGCATGGAGATC-TTCCATC-TATGATAGC  397

seq1  TTTTTTATTTTCTTTCAGCAAACACTTAATGTTTTTACTATACTAATCTT  450
      ||||||||||   |||||| ||||||  ||| |||||||||||||   | 
seq2  TTTTTTATTT--CTTCAGC-AACACT--ATG-TTTTACTATACTA---TC  438

seq1  TTCCTTGCTGGATTAAAGTTACTTCAAGATATTTTATATCATTTGAGGCA  500
      |||| ||||||||  ||||||||||| || | |||||||||||||| |||
seq2  TTCCCTGCTGGAT--AAGTTACTTCAGGA-AATTTATATCATTTGA-GCA  484

seq1  TAGCTCAGTCTTAAATA  517
      |||||||||||||||||
seq2  TAGCTCAGTCTTAAATA  501

seq1: chr15_15636940_15638017
seq2: B6Ng01-284J10.g_67_1156 (reverse)

seq1  TTTCAA--GTTACTCCATATCTACCTAGTA-GCTTG--TAATTGCTCATA  45
      ||||||  ||||||||||||||| |||||| |||||   |||||||||||
seq2  TTTCAAAGGTTACTCCATATCTA-CTAGTAGGCTTGGTAAATTGCTCATA  49

seq1  CTTTGATGAT-CTAGC--TCTG-AAATCAAAGACT-GAGTAAAATGTTTG  90
      | |||||||| |||||  |||| |||||||||||| |||| |||||||||
seq2  C-TTGATGATCCTAGCCTTCTGAAAATCAAAGACTGGAGT-AAATGTTTG  97

seq1  -AATG-TTTGCCTTTAAATTATTT-GCCCTAAAATATTTCCTGACACATT  137
       |||| |||||||||||||||||| |||||||||||||||||||||||||
seq2  AAATGTTTTGCCTTTAAATTATTTGGCCCTAAAATATTTCCTGACACATT  147

seq1  CCATTTCCGGTTCATTTAATTTTG-TACTGAATTTGACACGATGCTCTCA  186
      |||||||||||||||||||||||| |||||||||||||||||||||||| 
seq2  CCATTTCCGGTTCATTTAATTTTGTTACTGAATTTGACACGATGCTCTC-  196

seq1  AACATGGT-AGTAGATATTTTCCTTTGTATAGATTC-AAAAATCTCTTGG  234
      |||||||| |||||||||||||||||||||||| || |||||||||||||
seq2  AACATGGTAAGTAGATATTTTCCTTTGTATAGAATCAAAAAATCTCTTGG  246

seq1  CTTCTACCTCTGGAGTACTATGTATCAAAACTGTCTGAATTCATGCTGCA  284
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTACCTCTGGAGTACTATGTATCAAAACTGTCTGAATTCATGCTGCA  296

seq1  GGGTTAAAATATATTCATTTTACAAGTTTTCTTGTGAAAATAATGAAGAC  334
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAAAATATATTCATTTTACAAGTTTTCTTGTGAAAATAATGAAGAC  346

seq1  ATCCAAAGTGAGATGTCGGATTACTGATTTCCTTTGGGTGACTCTGGGAA  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAAGTGAGATGTCGGATTACTGATTTCCTTTGGGTGACTCTGGGAA  396

seq1  TGTGAGGAGCAAGTGTATTAAAAAAGATTATTGTGCAGTTTGAAATAAAA  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGAGCAAGTGTATTAAAAAAGATTATTGTGCAGTTTGAAATAAAA  446

seq1  GTGAGGTTTGAGAATCAAGAATATGAGAGATATAACAGCTGGATAGCATA  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGTTTGAGAATCAAGAATATGAGAGATATAACAGCTGGATAGCATA  496

seq1  GAACAAAGGAAAGGATGTGCAGAGAAGTATAAAAGAGGTATATAGTTCCA  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAAGGAAAGGATGTGCAGAGAAGTATAAAAGAGGTATATAGTTCCA  546

seq1  GTGTTTTGGCTCAAAAAAACAGAAAAATACTTTGATTTCACACCTCTAAG  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTGGCTCAAAAAAACAGAAAAATACTTTGATTTCACACCTCTAAG  596

seq1  ACAAACCAGACAGCCCTGTTGACAGAAGAGTGACAGACTGAGCCCCATGA  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACCAGACAGCCCTGTTGACAGAAGAGTGACAGACTGAGCCCCATGA  646

seq1  GAAGCATGTGGTTTTCACACACTTTGAAGGCAGTTCAGCGACTTGGCATG  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATGTGGTTTTCACACACTTTGAAGGCAGTTCAGCGACTTGGCATG  696

seq1  ATGGTAATCCCTAAAATCAGGAATGAGACAATGGAACACTTTTTGTAGCA  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAATCCCTAAAATCAGGAATGAGACAATGGAACACTTTTTGTAGCA  746

seq1  TCACTTTCAGAAGACAAGGCTGACTCCATGGCAGGCTTCAAGGTAGTTGG  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTCAGAAGACAAGGCTGACTCCATGGCAGGCTTCAAGGTAGTTGG  796

seq1  TTGGGAGTCTAGGCTAAAATCCAGGCAGGAAAAAACCCAGGCTTCAGGCA  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGTCTAGGCTAAAATCCAGGCAGGAAAAAACCCAGGCTTCAGGCA  846

seq1  GCTAATCAGAAACTGCCATGCCATCAGAGACTGACCCGCCACCTGGCCTG  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATCAGAAACTGCCATGCCATCAGAGACTGACCCGCCACCTGGCCTG  896

seq1  AGGCAGAGACAATGGGTCAGTAGCAGTTTCCAGACCTCAGCAATAATTAC  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAGACAATGGGTCAGTAGCAGTTTCCAGACCTCAGCAATAATTAC  946

seq1  CAGTCTTCCTCAGCAATAGTTTCCACCCCTGGTAATAATTCTTCAATGTC  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTCCTCAGCAATAGTTTCCACCCCTGGTAATAATTCTTCAATGTC  996

seq1  CCCACATATTAACATAGAGATCACCCATCCTGGAATTCCCCATAATGTGC  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACATATTAACATAGAGATCACCCATCCTGGAATTCCCCATAATGTGC  1046

seq1  TTTGTCCCCACAGATTAACATAGAGATCACCCATCCTGGAATTC  1078
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCCCACAGATTAACATAGAGATCACCCATCCTGGAATTC  1090