BAC Information

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BAC

Clone NameB6Ng01-286A10
Chromosome15 (Build37)
Map Location 52,198,715 - 52,199,890
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039662, Eif3s3, LOC100039679, D530033C11Rik, Rad21, Aard, LOC100039720, LOC665219, Slc30a8
Downstream geneLOC100039748, Thrap6, LOC100039745, Ext1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286A10.bB6Ng01-286A10.g
ACCGA084326GA084327
length1,1811,015
definitionB6Ng01-286A10.b B6Ng01-286A10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagattaagtcttgagctacataacatatggttaggtctgactt
cagtttcctgcattgtttccctgtaatataaacttctgtgtagctttaat
cacaatataattcaaaatctatttatgcttctttaaaagtcggacctgta
atgatggtacttaaaaatgctgaagaaatattaaaataagtatatgaatg
catgaataaataaatgaatgaatgcaaacctattttgcttttattgggaa
cttgtacataataataagtgtaccttttatttatcaatatggagctgata
ttacatgcctttggaggttatcaggaggtgttattagcatgtgttattat
aggtcctgatatttgttttgaaagctcatttttaaactagatttcatagt
cctcaaagacaaaagctaatggtttaaacataccaattttaacaaaaagt
ctgtacaaatatgtttaaaatatcaaaaagatggctattctgcattgtac
acagctgcctggcctggtgaactacaaatcttggctagtgtaagtgcaca
cacagtacaaatgaatccatgtaggagttgacacataggccactgttatg
tgtaattattagagtgttgataatgcccagggttatgactacattccctg
acctgtctgtgctacactacagataagccgttttgccctctaagggatgt
catctgtcactttgcttttgctcccgtgccctgccactgtcaaagtgttt
tcggctcagaatcagtctgactctagttataacacatgtcactgtgtcct
tggatcgaggcgcctttccagacgcctcattcagcttcaagttggctata
tgttcctcctgttatcttcatgtaaagccacctataatactggtccatgg
gttttatcaatgtcttttattccatattctactcagcatgaacaacatag
agcgggaactaatggcacagactggagtagaagagagcagattcatttaa
gcctctgccaaaaatttgtgcaattgatactctgaaaaagttttctttag
cttttaagagagtagctaaacaggctaagttcaaacctttatggaggcca
gtgtatacataatactttatgttaggactatttcccatcctactatataa
atgttagagtacctggccattattagaatgg

gaattcttttcctttctctatttctattattcttagatttggtcttttca
gatttcctagatgtttggtttcaggagattttcatatttaacactttttt
caccaaggtatttatttattctaatatgtcttcaatgcctaaaattctct
tttgcatctttttttattctgctgataatgcttgactctgaggtttttaa
ttaaagttcctagattttttttttcagatttctctcagtttgttttactt
ctttttattattgattttatttccactctttggtcttcaatggttgtact
catttctttccattgtttatttgtgttttcatagatttctttgagggggt
tagtcagtttttttttctttaaggacctcttttatatccatatattttaa
tgtttttttcttgtgttttatctatattgaaatactcaggtcctgataag
gtaggcttgctgggctctagtggcaacacattgttctggctgttgttgac
tgtgttttcatgctggtgtctaggcatcaagaatggagagagaggtgata
atctacaattagtctagatacttatttgacctgtgggttcttagggttct
tagtttgttgttgtgactgagataatgcaatgaattgggaagaaggacat
ttggagggaaagatctgtctagtccactgggaatggggacaaatgaggaa
gggagactttttcccacaatttgattagtttctttcataggttagaaaag
tatatattggatggatcagagggctcccaatggaggatctagagaaagta
cccaaggagctaaagggatctgcaaccctataggtggaacaacattatga
actaaccagtaccccggagctcttgactccagctgcatatgtatcaaaag
atggcctagtcggccatcactgaaaagagaggccattagacttgtaaact
gtatatgccccagtacaggggaacgccaggaccaaaaaattgtgaatggg
tgggtagggaagtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_52198715_52199890
seq2: B6Ng01-286A10.b_47_1227

seq1  GAATTCTAGATTAAGTCTTGAGCTACATAACATATGGTTAGGTCTGACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGATTAAGTCTTGAGCTACATAACATATGGTTAGGTCTGACTT  50

seq1  CAGTTTCCTGCATTGTTTCCCTGTAATATAAACTTCTGTGTAGCTTTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCCTGCATTGTTTCCCTGTAATATAAACTTCTGTGTAGCTTTAAT  100

seq1  CACAATATAATTCAAAATCTATTTATGCTTCTTTAAAAGTCGGACCTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATATAATTCAAAATCTATTTATGCTTCTTTAAAAGTCGGACCTGTA  150

seq1  ATGATGGTACTTAAAAATGCTGAAGAAATATTAAAATAAGTATATGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGTACTTAAAAATGCTGAAGAAATATTAAAATAAGTATATGAATG  200

seq1  CATGAATAAATAAATGAATGAATGCAAACCTATTTTGCTTTTATTGGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATAAATAAATGAATGAATGCAAACCTATTTTGCTTTTATTGGGAA  250

seq1  CTTGTACATAATAATAAGTGTACCTTTTATTTATCAATATGGAGCTGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTACATAATAATAAGTGTACCTTTTATTTATCAATATGGAGCTGATA  300

seq1  TTACATGCCTTTGGAGGTTATCAGGAGGTGTTATTAGCATGTGTTATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGCCTTTGGAGGTTATCAGGAGGTGTTATTAGCATGTGTTATTAT  350

seq1  AGGTCCTGATATTTGTTTTGAAAGCTCATTTTTAAACTAGATTTCATAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCTGATATTTGTTTTGAAAGCTCATTTTTAAACTAGATTTCATAGT  400

seq1  CCTCAAAGACAAAAGCTAATGGTTTAAACATACCAATTTTAACAAAAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAAGACAAAAGCTAATGGTTTAAACATACCAATTTTAACAAAAAGT  450

seq1  CTGTACAAATATGTTTAAAATATCAAAAAGATGGCTATTCTGCATTGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACAAATATGTTTAAAATATCAAAAAGATGGCTATTCTGCATTGTAC  500

seq1  ACAGCTGCCTGGCCTGGTGAACTACAAATCTTGGCTAGTGTAAGTGCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGCCTGGCCTGGTGAACTACAAATCTTGGCTAGTGTAAGTGCACA  550

seq1  CACAGTACAAATGAATCCATGTAGGAGTTGACACATAGGCCACTGTTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTACAAATGAATCCATGTAGGAGTTGACACATAGGCCACTGTTATG  600

seq1  TGTAATTATTAGAGTGTTGATAATGCCCAGGGTTATGACTACATTCCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTATTAGAGTGTTGATAATGCCCAGGGTTATGACTACATTCCCTG  650

seq1  ACCTGTCTGTGCTACACTACAGATAAGCCGTTTTGCCCTCTAAGGGATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTCTGTGCTACACTACAGATAAGCCGTTTTGCCCTCTAAGGGATGT  700

seq1  CATCTGTCACTTTGCTTTTGCTCCCGTGCCCTGCCACTGTCAAAGTGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTCACTTTGCTTTTGCTCCCGTGCCCTGCCACTGTCAAAGTGTTT  750

seq1  TCGGCTCAGAATCAGTCTGACTCTAGTTATAACACATGTCACTGTGTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCTCAGAATCAGTCTGACTCTAGTTATAACACATGTCACTGTGTCCT  800

seq1  TGGATCGAGGCGCCTTTCCAGACGCCTCATTCAGCTTCAAGTTGGCTATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCGAGGCGCCTTTCCAGACGCCTCATTCAGCTTCAAGTTGGCTATA  850

seq1  TGTTCCTCCTGTTATCTTCATGTAAAGCCACCTATAATACTGGTCCATGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTCCTGTTATCTTCATGTAAAGCCACCTATAATACTGGTCCATGG  900

seq1  GTTTTATCAATGTCTTTTATTCCATATTCTACTCAGCATGAACAACATAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATCAATGTCTTTTATTCCATATTCTACTCAGCATGAACAACATAG  950

seq1  AGCGGGAACTAATGGCACAGACTGGAGTAGAAGAGAGCAGGATTCAATTA  1000
      ||||||||||||||||||||||||||||||||||||||| |||||| |||
seq2  AGCGGGAACTAATGGCACAGACTGGAGTAGAAGAGAGCA-GATTCATTTA  999

seq1  AGCCTCTGCCAAAAATTTGTGCAATTGATAACTCTGAAAA--GTTTCTTT  1048
      ||||||||||||||||||||||||||||| ||||||||||   |||||||
seq2  AGCCTCTGCCAAAAATTTGTGCAATTGAT-ACTCTGAAAAAGTTTTCTTT  1048

seq1  AGCTTTTAAGAGAGTAGCTAAACAGGCTAAG-TCAAAACTTTAGTGAGG-  1096
      ||||||||||||||||||||||||||||||| ||||| |||||  |||| 
seq2  AGCTTTTAAGAGAGTAGCTAAACAGGCTAAGTTCAAACCTTTATGGAGGC  1098

seq1  CAGTGTATACATAATACTTAATGTAGTGACTATT--CCAT-CTACTATTA  1143
      ||||||||||||||||||| ||||   |||||||  |||| |||||||  
seq2  CAGTGTATACATAATACTTTATGTTAGGACTATTTCCCATCCTACTAT--  1146

seq1  ATAAATGTTAGAGTAC--TGCTATTATTAGTATGG  1176
      ||||||||||||||||   || |||||||| ||||
seq2  ATAAATGTTAGAGTACCTGGCCATTATTAGAATGG  1181


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