BAC Information

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BAC

Clone NameB6Ng01-287K06
Chromosome15 (Build37)
Map Location 66,637,136 - 66,763,972
singlet/doubletdoublet
Overlap geneTg, Sla, Wisp1, Ndrg1
Upstream geneC920006C10Rik, Oc90, F930104E18Rik, LOC100040835, Kcnq3, Lrrc6, LOC100040860, Tmem71, LOC100040881, Phf20l1
Downstream geneLOC100040667, St3gal1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287K06.bB6Ng01-287K06.g
ACCGA085510GA085511
length1,138332
definitionB6Ng01-287K06.b B6Ng01-287K06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,762,826 - 66,763,972)(66,637,136 - 66,637,468)
sequence
gaattcaaggtcttcccagctacacagagagtttaaggccagcctgggat
aaatggagctttgctcaaaaccaaaaactaatggataaaaacaacaacca
ggaagaaaaggaaagaaaggaaaaggaaggaaaggaaaggaaaggaaagg
aaaggaaagaaagagggaaagaaagaaagagaaggggagagagaaaagaa
ggaagaaaggaagaaagggaaagtcagacagacagacaaaccaggaacaa
cactaattctttaaggagtgaattccactgagcaaggactaatccaattt
tgggtgtctgatctagggctgtgcttcattggggtgtggcattagtcacc
ccaatgagtaacctaagagatccccacaaataaagctcttaagcgtcaag
aatgcatttttcctacaacttcagaggctgcaaatctgaggtcaaggttt
ggacagggctgggctcacttttcaaggccctttcttgccttctggattct
gctgactacatcataggccttctgtggcttctggctgcattacaccaatc
tctccatccatatggggtggctctctcttgttttctttttaatgatattg
ggctttagattagggatcattctaatccagaaggaccttgtcttaactaa
atatctctaagtattccaaacaaggtcatattctgaagtttcaggtgagc
atgaatttggggggagcactgccaccctagataggaggaggattgtcttg
tatcccattctgtcagtcatctgctgtggtatgcgcagttttggtcatgc
taaggtttgagagctagcagcttttggaaggcagacagatggctaacatt
tccttaaggaaccatgtggtgagaccttgggggttattcttgggatgtgc
aggaactaaccttgctggcttcacatttctactgcctactgacagtacat
ttaagaggaggttacacgaagtcttcattttgcaaatgaaaatgggaagc
ttcagtgtgatgatctgtgtcacctagctaataagcacataacaaactgg
gggtcagacccagtcatgctcagactcttgccatgtaattgttatgtgct
tcccacatatgggactttactgtccctcttgtgagtga
ctcagtcatacagccaaatcataaacactgagggaaccatgtattcatac
aggagacatgaagtccagggggcctgttggatacagcacaaccatgacaa
gaaacctaggcctggaaacccactgtgtgaaggagaaaggacagaagacc
gatcagtgaaggcttaatgttacctcaggttgggggtgggggggagatat
gaaaataattcccgacttgccagcactcagaactgcagcaccataggtca
gaacaaaacataaaatggtggccatcctaataaatatgtggtcttgcaac
atagcccaagctggcttagaacatttgatcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_66762826_66763972
seq2: B6Ng01-287K06.b_48_1185 (reverse)

seq1  TCACTCACAAAGAGGACAGTAAAGTCCAATATGTGGGAAAGGCACATAAC  50
      ||||||||||   |||||||||||||| |||||||||||  |||||||||
seq2  TCACTCACAAGAGGGACAGTAAAGTCCCATATGTGGGAA--GCACATAAC  48

seq1  AATTACATGGCAAGAGTCCTGAGCCATGACCTGGGTCTGACCCCCAGTTT  100
      ||||||||||||||||| ||||| ||||| ||||||||||||||||||||
seq2  AATTACATGGCAAGAGT-CTGAG-CATGA-CTGGGTCTGACCCCCAGTTT  95

seq1  GTTATGTGCTTATTAGCTAGGTGACCACCAGATCATCACACTTGAAGCCT  150
      |||||||||||||||||||||||||   ||||||||||||| ||||| ||
seq2  GTTATGTGCTTATTAGCTAGGTGAC--ACAGATCATCACAC-TGAAG-CT  141

seq1  TCCCATTTTCATTTGCAAAATGAAGACTTCGTGTAACCTCCTCTTAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTTTCATTTGCAAAATGAAGACTTCGTGTAACCTCCTCTTAAATG  191

seq1  TACTGTCAGTAGGCAGTAG-AATGTGGAAGCCAGCAAGGTTAGTTCCTGC  249
      ||||||||||||||||||| ||||| ||||||||||||||||||||||||
seq2  TACTGTCAGTAGGCAGTAGAAATGT-GAAGCCAGCAAGGTTAGTTCCTGC  240

seq1  ACATCCCAAGAATAACCCCCAAGGTCTCACCACATGGTTCC-TAAGGAAA  298
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ACATCCCAAGAATAACCCCCAAGGTCTCACCACATGGTTCCTTAAGGAAA  290

seq1  TGTTAGCCATCTGTCTGCCTTCCAAAAGCCTGCTAGCTCTCAAACCTTAG  348
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGTTAGCCATCTGTCTGCCTTCCAAAAG-CTGCTAGCTCTCAAACCTTAG  339

seq1  CATGACCAAAACTGCGCATACCACAGCAGATGACTGACAGAATGGGATAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACCAAAACTGCGCATACCACAGCAGATGACTGACAGAATGGGATAC  389

seq1  AAGACAATCCTCCTCCTATCTAGGGTGGCAGTGCTCCCCCCAAATTCATG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAATCCTCCTCCTATCTAGGGTGGCAGTGCTCCCCCCAAATTCATG  439

seq1  CTCACCTGAAACTTCAGAATATGACCTTGTTTGGAATACTTAGAGATATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTGAAACTTCAGAATATGACCTTGTTTGGAATACTTAGAGATATT  489

seq1  TAGTTAAGACAAGGTCCTTCTGGATTAGAATGATCCCTAATCTAAAGCCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAAGACAAGGTCCTTCTGGATTAGAATGATCCCTAATCTAAAGCCC  539

seq1  AATATCATTAAAAAGAAAACAAGAGAGAGCCACCCCATATGGATGGAGAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCATTAAAAAGAAAACAAGAGAGAGCCACCCCATATGGATGGAGAG  589

seq1  ATTGGTGTAATGCAGCCAGAAGCCACAGAAGGCCTATGATGTAGTCAGCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTGTAATGCAGCCAGAAGCCACAGAAGGCCTATGATGTAGTCAGCA  639

seq1  GAATCCAGAAGGCAAGAAAGGGCCTTGAAAAGTGAGCCCAGCCCTGTCCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCAGAAGGCAAGAAAGGGCCTTGAAAAGTGAGCCCAGCCCTGTCCA  689

seq1  AACCTTGACCTCAGATTTGCAGCCTCTGAAGTTGTAGGAAAAATGCATTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTGACCTCAGATTTGCAGCCTCTGAAGTTGTAGGAAAAATGCATTC  739

seq1  TTGACGCTTAAGAGCTTTATTTGTGGGGATCTCTTAGGTTACTCATTGGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACGCTTAAGAGCTTTATTTGTGGGGATCTCTTAGGTTACTCATTGGG  789

seq1  GTGACTAATGCCACACCCCAATGAAGCACAGCCCTAGATCAGACACCCAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTAATGCCACACCCCAATGAAGCACAGCCCTAGATCAGACACCCAA  839

seq1  AATTGGATTAGTCCTTGCTCAGTGGAATTCACTCCTTAAAGAATTAGTGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGATTAGTCCTTGCTCAGTGGAATTCACTCCTTAAAGAATTAGTGT  889

seq1  TGTTCCTGGTTTGTCTGTCTGTCTGACTTTCCCTTTCTTCCTTTCTTCCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTGGTTTGTCTGTCTGTCTGACTTTCCCTTTCTTCCTTTCTTCCT  939

seq1  TCTTTTCTCTCTCCCCTTCTCTTTCTTTCTTTCCCTCTTTCTTTCCTTTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTCTCTCCCCTTCTCTTTCTTTCTTTCCCTCTTTCTTTCCTTTC  989

seq1  CTTTCCTTTCCTTTCCTTTCCTTCCTTTTCCTTTCTTTCCTTTTCTTCCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTTCCTTTCCTTTCCTTCCTTTTCCTTTCTTTCCTTTTCTTCCT  1039

seq1  GGTTGTTGTTTTTATCCATTAGTTTTTGGTTTTGAGCAAAGCTCCATTTA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTTGTTTTTATCCATTAGTTTTTGGTTTTGAGCAAAGCTCCATTTA  1089

seq1  TCCCAGGCTGGCCTTAAACTCTCTGTGTAGCTGGGAAGACCTTGAATTC  1147
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGCTGGCCTTAAACTCTCTGTGTAGCTGGGAAGACCTTGAATTC  1138

seq1: chr15_66637136_66637468
seq2: B6Ng01-287K06.g_75_406

seq1  CTCAGTCATACAGCCAAATCATAAACACTGAGGGAACCATGTATTCATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTCATACAGCCAAATCATAAACACTGAGGGAACCATGTATTCATAC  50

seq1  AGGAGACATGAAGTCCAGGGGGCCTGTTGGATACAGCACAACCATGACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGACATGAAGTCCAGGGGGCCTGTTGGATACAGCACAACCATGACAA  100

seq1  GAAACCTAGGCCTGGAAACCCACTGTGTGAAGGAGAAAGGACAGAAGACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCTAGGCCTGGAAACCCACTGTGTGAAGGAGAAAGGACAGAAGACC  150

seq1  GATCAGTGAAGGCTTAATGTTACCTCAGGTTGGGGGTGGGGGGGAGATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGTGAAGGCTTAATGTTACCTCAGGTTGGGGGTGGGGGGGAGATAT  200

seq1  GAAAATAATTCCAGACTTGCCAGCACTCAGAACTGCAGCACCATAGGTCA  250
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAAAATAATTCCCGACTTGCCAGCACTCAGAACTGCAGCACCATAGGTCA  250

seq1  GAACAAAACAGAAAATGGTGGCCATCCTAATAGTATATGTGGTCTTGCAA  300
      |||||||||| |||||||||||||||||||||  ||||||||||||||||
seq2  GAACAAAACATAAAATGGTGGCCATCCTAATA-AATATGTGGTCTTGCAA  299

seq1  CATAGCCCAAGCTGGCTTAGAACATTTGATCCT  333
      |||||||||||||||||||||||||||||||||
seq2  CATAGCCCAAGCTGGCTTAGAACATTTGATCCT  332