BAC Information

Click to search

BAC

Clone NameB6Ng01-287L22
Chromosome15 (Build37)
Map Location 56,703,361 - 56,704,370
singlet/doubletsinglet
Overlap genenone
Upstream geneSntb1, LOC665348, LOC100039908, Hba-ps3, Has2, EG594843, LOC435442
Downstream geneLOC100040067, LOC100039984, BC026439, Zhx2, Derl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287L22.bB6Ng01-287L22.g
ACCGA085585GA085586
length1,1131,151
definitionB6Ng01-287L22.b B6Ng01-287L22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaactgaggaatactgaatgactgagaagcacctaaagaaatg
ttcaatatccttaatcatcaaggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgactaagatcaaaaactcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgctggtg
ggattgtaagctggtacaaccactctggaagtcagtgtggcagttcctca
gaaaattgtacatagttctatgggaagatccagcaataccactcctgggc
atatacccagaagatgctccaacatgtaataaggacacatgctccactat
gttcatagcagccttatatataatagccagaatctgaaaagaacccagat
gtccctcaacagaggaatggatacagaaaatgtgttacatttacacagta
gagtactatgcagctattaaaaacaatgaatttatgaaattcttagacaa
atggatggctctggaggatatcatcctgagtgagataacctaatcacaaa
agaacacacatgatatgtactcactgataagtggatattagcctagaaac
tctttctcttttcttaacccattgcctttcccatcatagactggattctg
tttttaagatgcttttgctcaatactcatttcattgtttcctcatgtagc
ttgcttgcttatcatgagattacatccatgtctgagaacatgagggtttt
tttttttcttgtttactcttccctactggagtttagacacacatgaggaa
atacattactttatactaacacacaacaatcatggctgtagaaacactgc
acacatcaaagggattcagctggtctagatcatctgtgctttgttccact
attttttgtctgttaatctagtaacagtgctttgtaagtctgtaataatg
aatgtaactattaaataatagaatactgttgaatgtctaacactgcttga
cctaaattcaaggcttgcgtttatgttccttacagaatgaaagttactta
tcgatgtgatggctggatgcatgtgcctagtaagtcagatatgccaatct
agtttggtggatt
gaattcaagacccatacttaaatatgataaaagcaatctacagcaagcta
gtagcaaacatcaaagtaaatggcgagaagctggaagcagtcccatgaaa
atcagggactagacaaggctgtccaccttctccatacctattgaacatag
tatttgaagtcctagccagagcaattagacaacaaaaggagatcaattgg
aaagatagaagtcaaaatatcactttttgcagataacatgatagtatata
taagtgaccctaaaaatttgaccagtgaactcctaaacctgataaacaga
ttcagtgtagtatctggatataaaattaactcaaaacaagtcaatggcct
ttctctacacaaatgattaacaggctgagaaagaaattagggaaataaca
cccttcacaatagtcacaaataatataaaataccttggcatgactctaac
taaggaagtgaaagatctatatgataagaacttcaagtctctgaagaaag
aaattaaagaagatctcagaagatggaaagatctcccatgttcatggatt
ggcaggatcaatatagtaaaaatggatctcttgccaaaagcaatctacaa
atttaatgcaatccccatcaaaattccaactcaattcttcaacgaattag
gaagggcaatctgcaaattcatctggaataataaaaaaactagaatagca
aaaactcttctcaatgataaaaaaccctctgggggaataaccatgcttga
cgtaaagctgtactacagagccattgtgattaaaattgcatggcactggt
atagttgcgagtagaccaatggactagaattgaagacccagaaatgaacc
cacacacctatggtcacttgatctttgacaagggatctaaaaccatccag
tggaaaaaaagacagcattttcacaaatggtgctggcaaactggtggtta
tcaaatagagatgtgatgatccattccttctctgtactaagtcaaatcta
gtggatcagactcacataaaacagagacactgaaacttatagagagaagt
ggggcaaggctgcagaattggtacaggggtatctgaatagaacagtaatg
cgtggctaagatcgagattgacaatggactaatgaacttccaaaggtttc
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_56703361_56704370
seq2: B6Ng01-287L22.b_156_1164

seq1  CCTCACACCAGTCAGAATGACTAAGATCAAAAACTCAGGTGACAGCAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACACCAGTCAGAATGACTAAGATCAAAAACTCAGGTGACAGCAGAT  50

seq1  GCTGGCAAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTGGTGGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCAAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTGGTGGGAT  100

seq1  TGTAAGCTGGTACAACCACTCTGGAAGTCAGTGTGGCAGTTCCTCAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGCTGGTACAACCACTCTGGAAGTCAGTGTGGCAGTTCCTCAGAAA  150

seq1  ATTGTACATAGTTCTATGGGAAGATCCAGCAATACCACTCCTGGGCATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACATAGTTCTATGGGAAGATCCAGCAATACCACTCCTGGGCATAT  200

seq1  ACCCAGAAGATGCTCCAACATGTAATAAGGACACATGCTCCACTATGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGAAGATGCTCCAACATGTAATAAGGACACATGCTCCACTATGTTC  250

seq1  ATAGCAGCCTTATATATAATAGCCAGAATCTGAAAAGAACCCAGATGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAGCCTTATATATAATAGCCAGAATCTGAAAAGAACCCAGATGTCC  300

seq1  CTCAACAGAGGAATGGATACAGAAAATGTGTTACATTTACACAGTAGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACAGAGGAATGGATACAGAAAATGTGTTACATTTACACAGTAGAGT  350

seq1  ACTATGCAGCTATTAAAAACAATGAATTTATGAAATTCTTAGACAAATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGCAGCTATTAAAAACAATGAATTTATGAAATTCTTAGACAAATGG  400

seq1  ATGGCTCTGGAGGATATCATCCTGAGTGAGATAACCTAATCACAAAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCTGGAGGATATCATCCTGAGTGAGATAACCTAATCACAAAAGAA  450

seq1  CACACATGATATGTACTCACTGATAAGTGGATATTAGCCTAGAAACTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATGATATGTACTCACTGATAAGTGGATATTAGCCTAGAAACTCTT  500

seq1  TCTCTTTTCTTAACCCATTGCCTTTCCCATCATAGACTGGATTCTGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTTCTTAACCCATTGCCTTTCCCATCATAGACTGGATTCTGTTTT  550

seq1  TAAGATGCTTTTGCTCAATACTCATTTCATTGTTTCCTCATGTAGCTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATGCTTTTGCTCAATACTCATTTCATTGTTTCCTCATGTAGCTTGC  600

seq1  TTGCTTATCATGAGATTACATCCATGTCTGAGAACATGAGGG-TTTTTTT  649
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTGCTTATCATGAGATTACATCCATGTCTGAGAACATGAGGGTTTTTTTT  650

seq1  TTTCTTGTTTACTCTTCCCTACTGGAGTTTAGACACACATGAGGAAATAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGTTTACTCTTCCCTACTGGAGTTTAGACACACATGAGGAAATAC  700

seq1  ATTACTTTATACTAACACACAACAATCATGGCTGTAGAAACACTGCACAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTTATACTAACACACAACAATCATGGCTGTAGAAACACTGCACAC  750

seq1  ATCAAAGGGATTCAGCTGGTCTAGATCATCTGTGCTTTGTTCCACTATTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATCAAAGGGATTCAGCTGGTCTAGATCATCTGTGCTTTGTTCCACTA-TT  799

seq1  TTTTGTCTGTTAATCTAGTAACAGTGCTTTGTAAGTCTGT-ATAATGAAT  848
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTTTGTCTGTTAATCTAGTAACAGTGCTTTGTAAGTCTGTAATAATGAAT  849

seq1  GTAACTATTAAAT-ATAG-ATACTGTTGAATGTCTAACACTGCTTGACCC  896
      ||||||||||||| |||| |||||||||||||||||||||||||||||| 
seq2  GTAACTATTAAATAATAGAATACTGTTGAATGTCTAACACTGCTTGACC-  898

seq1  TAAAATTCAAGGCTTGCGTTTATGTTCCTTACAGAATTGAAAGTTTACTA  946
        |||||||||||||||||||||||||||||||||| ||||||||   ||
seq2  -TAAATTCAAGGCTTGCGTTTATGTTCCTTACAGAA-TGAAAGTTACTTA  946

seq1  TCGAATGTGATTGCTGGATGCATGTG-CTAGTAAGTTCAGATATGCAAAT  995
      ||| ||||||| |||||||||||||| |||||||| |||||||||| |||
seq2  TCG-ATGTGATGGCTGGATGCATGTGCCTAGTAAG-TCAGATATGCCAAT  994

seq1  CTAGTTTGGTGGATT  1010
      |||||||||||||||
seq2  CTAGTTTGGTGGATT  1009