BAC Information

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BAC

Clone NameB6Ng01-287P01
Chromosome15 (Build37)
Map Location 72,603,914 - 72,737,759
singlet/doubletdoublet
Overlap gene1810044A24Rik, Peg13
Upstream geneLOC100040847, Col22a1, Kcnk9, LOC665621
Downstream geneLOC100041120, Chrac1, Eif2c2, Ptk2, LOC666053, LOC100040929, Dennd3, Slc45a4, Gpr20, LOC100040946, pPtp4a3, Gm628, LOC100041273, EG625276, LOC100040966
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287P01.bB6Ng01-287P01.g
ACCGA085732GA085733
length403785
definitionB6Ng01-287P01.b B6Ng01-287P01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,603,914 - 72,604,322)(72,736,976 - 72,737,759)
sequence
ctaattatatccacctaagacagatttactctgaagactaagaataacta
aataatgtaagttacaaagagtaagactagatgtcagctgaaaacactaa
gccgaaggtaagctaggattagtcagcaaggcatcccaagagatcaggac
caacacaaaatgagatgcagaggagggcaggggttcatctctataacagg
ggctgtattaccgccaagacacccaacttctctctcactcagtccttacc
tctaccactggtggagtggcatagccagtctgaggtcactctaggataca
tgagacgctgcagcttaaggacaaaaaggcattggggaggagtgcaggag
ggcaagcagacaggaaggaaggggggcagaaaggcagggaggagggagag
agg
gaattccaaagacagaaagagatatacccctgtgttaagactgcaagcaa
gctgccttcagcttccgggtgctttgggatgagtcacaccactctttaaa
aaaataagactgagaactccaaaaatccatatttattctcacaagagaac
agcagaccagggcagggatgctgaacagctcttccgatctcagaggacag
cgttaggggagcgggcaggtcatgggagagaacacagccgactgcagagc
agcggcccactgataaaagtaatcccaggccacagtggcaacccctgctt
tagctgtcagcaaactgtgaagcggtacaccgtcagatgtgattcacaca
tagccctggactctggatgaacaaccgtgttgatgcctctgcccttagca
gcctgctcccagggtgttcatcagaaaggtggcaagaagcgtacccaccc
gtgggaagcagagcgggatctcatcagagcttagcaagccactggtgtct
ctgctgaaccccaggctgcgagcatagggccattcagtgacagtacacag
ggaaaaggaggaagagcaagcttacctgtggccacatctaccactctgca
ctagtggcctccccagagaactctgcatgtctcactccagggcagctaca
aactaccttccttctatggttttgttgtagcatcaagaaaaatcatcact
tttttgattgacatcttattccataagaaatgatttaatagcagcttgat
atgtaatcatatatatgtgtgtgtgttttgtgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_72603914_72604322
seq2: B6Ng01-287P01.b_45_453

seq1  GAATTCCTAATTATATCCACCTAAGACAGATTTACTCTGAAGACTAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAATTATATCCACCTAAGACAGATTTACTCTGAAGACTAAGAA  50

seq1  TAACTAAATAATGTAAGTTACAAAGAGTAAGACTAGATGTCAGCTGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAAATAATGTAAGTTACAAAGAGTAAGACTAGATGTCAGCTGAAAA  100

seq1  CACTAAGCCGAAGGTAAGCTAGGATTAGTCAGCAAGGCATCCCAAGAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAGCCGAAGGTAAGCTAGGATTAGTCAGCAAGGCATCCCAAGAGAT  150

seq1  CAGGACCAACACAAAATGAGATGCAGAGGAGGGCAGGGGTTCATCTCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCAACACAAAATGAGATGCAGAGGAGGGCAGGGGTTCATCTCTAT  200

seq1  AACAGGGGCTGTATTACCGCCAAGACACCCAACTTCTCTCTCACTCAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGGGCTGTATTACCGCCAAGACACCCAACTTCTCTCTCACTCAGTC  250

seq1  CTTACCTCTACCACTGGTGGAGTGGCATAGCCAGTCTGAGGTCACTCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTCTACCACTGGTGGAGTGGCATAGCCAGTCTGAGGTCACTCTAG  300

seq1  GATACATGAGACGCTGCAGCTTAAGGACAAAAAGGCATTGGGGAGGAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACATGAGACGCTGCAGCTTAAGGACAAAAAGGCATTGGGGAGGAGTG  350

seq1  CAGGAGGGCAAGCAGACAGGAAGGAAGGGGGGCAGAAAGGCAGGGAGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGGCAAGCAGACAGGAAGGAAGGGGGGCAGAAAGGCAGGGAGGAG  400

seq1  GGAGAGAGG  409
      |||||||||
seq2  GGAGAGAGG  409

seq1: chr15_72736976_72737759
seq2: B6Ng01-287P01.g_66_850 (reverse)

seq1  ACCCAC-AAACACACACACATATATATGATTACATATCAAGCTGCTATTA  49
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACAAAACACACACACATATATATGATTACATATCAAGCTGCTATTA  50

seq1  AATCATTTCTTATGGAATAAGATGTCAATCAAAAAAGTGATGATTTTTCT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTTCTTATGGAATAAGATGTCAATCAAAAAAGTGATGATTTTTCT  100

seq1  TGATGCTACAACAAAACCATAGAAGGAAGGTAGTTTGTAGCTGCCCTGGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTACAACAAAACCATAGAAGGAAGGTAGTTTGTAGCTGCCCTGGA  150

seq1  GTGAGACATGCAGAGTTCTCTGGGGAGGCCACTAGTGCAGAGTGGTAGAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGACATGCAGAGTTCTCTGGGGAGGCCACTAGTGCAGAGTGGTAGAT  200

seq1  GTGGCCACAGGTAAGCTTGCTCTTCCTCCTTTTCCCTGTGTACTGTCACT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCACAGGTAAGCTTGCTCTTCCTCCTTTTCCCTGTGTACTGTCACT  250

seq1  GAATGGCCCTATGCTCGCAGCCTGGGGTTCAGCAGAGACACCAGTGGCTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCCCTATGCTCGCAGCCTGGGGTTCAGCAGAGACACCAGTGGCTT  300

seq1  GCTAAGCTCTGATGAGATCCCGCTCTGCTTCCCACGGGTGGGTACGCTTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGCTCTGATGAGATCCCGCTCTGCTTCCCACGGGTGGGTACGCTTC  350

seq1  TTGCCACCTTTCTGATGAACACCCTGGGAGCAGGCTGCTAAGGGCAGAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCACCTTTCTGATGAACACCCTGGGAGCAGGCTGCTAAGGGCAGAGG  400

seq1  CATCAACACGGTTGTTCATCCAGAGTCCAGGGCTATGTGTGAATCACATC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAACACGGTTGTTCATCCAGAGTCCAGGGCTATGTGTGAATCACATC  450

seq1  TGACGGTGTACCGCTTCACAGTTTGCTGACAGCTAAAGCAGGGGTTGCCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGGTGTACCGCTTCACAGTTTGCTGACAGCTAAAGCAGGGGTTGCCA  500

seq1  CTGTGGCCTGGGATTACTTTTATCAGTGGGCCGCTGCTCTGCAGTCGGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCCTGGGATTACTTTTATCAGTGGGCCGCTGCTCTGCAGTCGGCT  550

seq1  GTGTTCTCTCCCATGACCTGCCCGCTCCCCTAACGCTGTCCTCTGAGATC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTCTCCCATGACCTGCCCGCTCCCCTAACGCTGTCCTCTGAGATC  600

seq1  GGAAGAGCTGTTCAGCATCCCTGCCCTGGTCTGCTGTTCTCTTGTGAGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGCTGTTCAGCATCCCTGCCCTGGTCTGCTGTTCTCTTGTGAGAA  650

seq1  TAAATATGGATTTTTGGAGTTCTCAGTCTTATTTTTTTAAAGAGTGGTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATGGATTTTTGGAGTTCTCAGTCTTATTTTTTTAAAGAGTGGTGT  700

seq1  GACTCATCCCAAAGCACCCGGAAGCTGAAGGCAGCTTGCTTGCAGTCTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCATCCCAAAGCACCCGGAAGCTGAAGGCAGCTTGCTTGCAGTCTTA  750

seq1  ACACAGGGGTATATCTCTTTCTGTCTTTGGAATTC  784
      |||||||||||||||||||||||||||||||||||
seq2  ACACAGGGGTATATCTCTTTCTGTCTTTGGAATTC  785