BAC Information

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BAC

Clone NameB6Ng01-288F21
Chromosome15 (Build37)
Map Location 31,169,014 - 31,170,009
singlet/doubletsinglet
Overlap geneDap
Upstream geneCtnnd2, 9630009A06Rik
Downstream geneEG625796, 5730557B15Rik, Ropn1l, LOC622810, March6, Cmbl, Cct5, A930016P21Rik, LOC667231, Tas2r119
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288F21.bB6Ng01-288F21.g
ACCGA086046GA086047
length1,2141,011
definitionB6Ng01-288F21.b B6Ng01-288F21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggtcaccctctgtggggagccgccctcacattcgccgttgca
agatggcgctgacatcctgtgttctaagtggtaaacaaataatctgcgca
tgtgccaagggtagttttccaccccatgtgctctgccttccccgtgacga
caactcggccgatgggctgcagccaatcaaggagtaatacgtcctaggcg
gagaataattctccttaaaaagggacggggtttcgccatccttccctttt
gcactcttgctctggctcttgcgctcttgcgctctggctcctaaagatgt
aagcaatagagctcttgctctcttgcactcttgctcctgaagatgtaagc
aataaagctctctcttgcttttgcccttttgctctcttgctctggctctt
gcactctagcgctcttgcgctctggctcctaaagatgtaagcaatagagc
tcttgctctcttgcttcttgctcctaaagatgtaagcaatagagctcttg
cgctcttgcgctctggctcctaaagatgtaagcaatggggggcttgcatt
cttactcctgaagatgtaagcaataaagttttgccgcagaagattctggt
ttgctgcgtctttcctggccggtcgagaacgcgtgtaagaaccctctatt
ttacacgcaagtcaaggactctctcaaatcctgttagtaaggccagctgc
agggagatgaggaggcagctgcagcacatatctgggcgcacctcgagtct
gagagagtggggacagaggtgctgctgtggaaagtggagcagaggcagag
ggacctggagggactgcagctgtcctgtcagtgacagccacagcctttct
tcacctttctcgactacaagtcagagcaaagatgcttgccttgggggcag
tggtgctggcccgccctgggcctgatgtgggggtcaccagtcagccgagg
tgtattccagaagtttcctttagcttcagtgtgggcacagtgctgggttc
tagaagaccccaccctcccactctgctgcttccgttctaaactttcagtg
ttgcttattttgacaatttcatggggaacaatagtcatcacttaaaaaat
agtgggccaggtgacccgggatctccctcttttgggctgcctggatacct
agtcccgttatccccatcgcttcttaaccccctttgggtgtgagagaaac
cattgagatggggt
gaattccagtggcttgacaagacaggacacaggagagagacagagacaaa
gagaaacagacagagagaaagagacaggaggggagggagagagagagaca
gagagagaaagacacagagagagagagagagagagacagagagagaaaga
cacagagagagagagagagagacagagagagaaagacacacagagagaga
gagagagagagagagagagagagagagagaatggcatgataatgtccgat
acacactagctgccctgcatctcctaggaactctcaccagacgcagcccc
tgaccttggattagaccatgagcccaggtaaaggcgcttttcttaaaaat
tagatgactacactgtagtgacagaaaatggactacgatagaaggcccct
tggggatgaattctttcatctcttatctgcctgaaaatgtattttctgtg
ctttaactttgaaaagatggtgcgtttgttagcctccctgtcaccgtgac
cgagcacatgacataaacaacgtaaaaggagaggtctgtgcagtgcttgc
gggacgatgtgctcgctcagccccatgcttgggcagcacgctgtgttaga
ggagcctgctgatggaggatgggcaggaagtggagggagctgtgaaccat
ggctgtggtaccgtccctgtgctggctttgtagcctttccttctgactca
tggctgccatgatacgggtccctgtcctgccacgccctcccctcgctgat
gaactgagcttttcaaaactgcaacaaaatccatctttctttcagttttt
ttttctggaaagtgtttgtcagtaggagggcagtagcccccgtgagttca
gctcttcctccagggtgacctggggtgagactggtacattcttcattcta
agtctgtagaatagaatcggggacgacgtgtcctcagttgcataacaccg
agggaacaggtgagaagtcatcatttttccgtggtgactactgagaaggg
ctggctgagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_31169014_31170009
seq2: B6Ng01-288F21.g_68_1078

seq1  GAATTCCAGTGGCTTGACAAGACAGGACACAGGAGAGAGACAGAGACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTGGCTTGACAAGACAGGACACAGGAGAGAGACAGAGACAAA  50

seq1  GAGAAACAGACAGAGAGAAAGAGACAGGAGGGGAGGGAGAGAGAGAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACAGACAGAGAGAAAGAGACAGGAGGGGAGGGAGAGAGAGAGACA  100

seq1  GAGAGAGAAAGACACAGAGAGAGAGAGAGAGAGAGACAGAGAGAGAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAAAGACACAGAGAGAGAGAGAGAGAGAGACAGAGAGAGAAAGA  150

seq1  CACAGAGAGAGAGAGAGAGAGACAGAGAGAGAAAGACACACAGAGAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGAGAGAGAGAGAGAGACAGAGAGAGAAAGACACACAGAGAGAGA  200

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGGCATGATAATGTCCGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGGCATGATAATGTCCGAT  250

seq1  ACACACTAGCTGCCCTGCATCTCCTAGGAACTCTCACCAGACGCAGCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTAGCTGCCCTGCATCTCCTAGGAACTCTCACCAGACGCAGCCCC  300

seq1  TGACCTTGGATTAGACCATGAGCCCAGGTAAAGGCGCTTTTCTTAAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTGGATTAGACCATGAGCCCAGGTAAAGGCGCTTTTCTTAAAAAT  350

seq1  TAGATGACTACACTGTAGTGACAGAAAATGGACTACGATAGAAGGCCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGACTACACTGTAGTGACAGAAAATGGACTACGATAGAAGGCCCCT  400

seq1  TGGGGATGAATTCTTTCATCTCTTATCTGCCTGAAAATGTATTTTCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGATGAATTCTTTCATCTCTTATCTGCCTGAAAATGTATTTTCTGTG  450

seq1  CTTTAACTTTGAAAAGATGGTGCGTTTGTTAGCCTCCCTGTCACCGTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAACTTTGAAAAGATGGTGCGTTTGTTAGCCTCCCTGTCACCGTGAC  500

seq1  CGAGCACATGACATAAACAACGTAAAAGGAGAGGTCTGTGCAGTGCTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCACATGACATAAACAACGTAAAAGGAGAGGTCTGTGCAGTGCTTGC  550

seq1  GGGACGATGTGCTCGCTCAGCCCCATGCTTGGGCAGCACGCTGTGTTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACGATGTGCTCGCTCAGCCCCATGCTTGGGCAGCACGCTGTGTTAGA  600

seq1  GGAGCCTGCTGATGGAGGATGGGCAGGAAGTGGAGGGAGCTGTGAACCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCTGCTGATGGAGGATGGGCAGGAAGTGGAGGGAGCTGTGAACCAT  650

seq1  GGCTGTGGTACCGTCCCTGTGCTGGCTTTGTAGCCTTTCCTTCTGACTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGGTACCGTCCCTGTGCTGGCTTTGTAGCCTTTCCTTCTGACTCA  700

seq1  TGGCTGCCATGATACGGGTCCCTGTCCTGCCACGCCCTCCCCTCGCTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCCATGATACGGGTCCCTGTCCTGCCACGCCCTCCCCTCGCTGAT  750

seq1  GAACTGAGC-TTTCAAAACTGCAACAAAATCCATCTTTCATTCAG--TTT  797
      ||||||||| ||||||||||||||||||||||||||||| |||||  |||
seq2  GAACTGAGCTTTTCAAAACTGCAACAAAATCCATCTTTCTTTCAGTTTTT  800

seq1  TTTTCTGGAAAGTGTTTGTCAGTAGGAGGGCAGTAGCCCCCGTGAG-TCA  846
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTTCTGGAAAGTGTTTGTCAGTAGGAGGGCAGTAGCCCCCGTGAGTTCA  850

seq1  GCTCTTCCT-CAGGGTGACCT-GGGTGAGACTGGTACA-TCTTCATTCTA  893
      ||||||||| ||||||||||| |||||||||||||||| |||||||||||
seq2  GCTCTTCCTCCAGGGTGACCTGGGGTGAGACTGGTACATTCTTCATTCTA  900

seq1  AGTCTGTAG-ATAGAA-CGGGGACAACGTGTCC-CAGTTGCATAACAGCG  940
      ||||||||| |||||| ||||||| |||||||| ||||||||||||| ||
seq2  AGTCTGTAGAATAGAATCGGGGACGACGTGTCCTCAGTTGCATAACACCG  950

seq1  AGGG-ACAGGTGAG-AGTCATCATTTTACC--TGTGACTACT-AGGAAGG  985
      |||| ||||||||| |||||||||||| ||   ||||||||| || | ||
seq2  AGGGAACAGGTGAGAAGTCATCATTTTTCCGTGGTGACTACTGAGAAGGG  1000

seq1  TTGGCTGAGCC  996
       ||||||||||
seq2  CTGGCTGAGCC  1011