BAC Information

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BAC

Clone NameB6Ng01-288K15
Chromosome15 (Build37)
Map Location 15,133,178 - 15,220,545
singlet/doubletdoublet
Overlap geneLOC100040033
Upstream geneLOC674819, LOC100040024
Downstream geneLOC100040046, EG239341, LOC100040087, LOC624183
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288K15.bB6Ng01-288K15.g
ACCGA086271GA086272
length1,1461,090
definitionB6Ng01-288K15.b B6Ng01-288K15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,219,404 - 15,220,545)(15,133,178 - 15,134,277)
sequence
gaattcagaacttacagcagttctttccagggacatctttaataagattt
taatggttttattcagttattgttgttttcttttgatagacatatatgct
gtatttatttttaacacttctatattattcagaaaattgaaagttttgca
attattttgtaaattttttaaccttcctttaagctgaacaacatgttgtg
gtaaaattttttcaggttttctaaactgccttgtatcattcaattcccag
ttaaaagacacaaaacctttacatgtataataggcgttaacagcactaga
gtttgcatatatcaactctctatgctattttgtgtatattccagtcaata
ataccaagttattacatgccatattttgcttgggcttctcttactccaat
tggtcatccctcatgatcatgttttcatgattcacataccacatagcatt
ttcttctctctccacccactcccccaccccttcttgttaccgcctagact
ccattgccagggaactgaagcactgcttatttctcttctgcccagctatt
ggctggaggcgtctttattcagccaatagttttaaattaaagagcagagt
tacatagtaccacttggtataagtgaggaattctttatctctgtggccaa
tcagaccttgagggccagcattcatctttataatacacaaactaaacctc
gatactttcctcttgactttaaaaatttttttatatgcagtttgtgtcac
ttctgcacaaagtaaaaaacatacataaggagctcttaaagattgtggct
gaaaataaatatgtgttaatactgtgtgttttggtaacatattactctgc
ttaagttaactactttaaagtaaaaatggcatagttatattttgacaact
atatctaaaacaataaaagcctactatttaaaaattgattttatgcaaaa
tatgctataacttgactggcacttcaaaccacaattttggcagcgattgg
gaataatatcatcattggatcttacattacacttagagatgtttatggat
tatttgaaaataaatgcttcaacaataaaattacatttggagattataaa
caaaatacccatgataaccttctcataataaactgaactgatgaaa

gaattcaaagttaaaaaaattcatcaacacaggtatttccaagggattaa
aatgttttgctaaaatcatatagactagtaaatatttaaatttcaaaata
tatcttttctatttatctgcttattaattttgacatataatgtacattta
ctaccaattctacaggccagaaggttctaaagtgtagtgacatttttaga
agatttaagatttcaacaaagttaaatcaattattcagagtaacatatta
gtgaggaagaaaataaaatatgtaaactcagtaaaacaaaataactaacc
agagtcaatgaaatgaaacttgcttagattatttgaaatttgtttttgtt
tgttttatgctagaaaagaaatgtcattggggaagataatcacattttaa
aagttctccaaactcactgtttttcccatagttctgggtaatcacagtga
gtcataaaacaaagggaagcatcataaacattaggagagatctgtgacaa
gagttgaaggtgacaaaggaggtgcaaaagattggttcatatacattgta
tacatatacatgtcaaattgtctaaacacaagtatactttgtaataaaaa
gaaaaaatctgaactttttgtcaaatatccacttatcagtgagtacatac
catgtgtgttattttgagactgggttacgtcactcaaaatacatcatgtc
cttgttcttaatagttgaagagtattccactaggtaaatgagatggagga
aactgagtgggagaaagaagttggggcaggtatggggtgagacagaaggt
acacccagagggccagaagaatgaatctaaatatgcaatggtgggagtta
tgggacagagaaaacatctagaaagtcccagaaacctgggatgtgagagg
ctaccagaattcaacggggatgacagtagctgaatgccaatagtgtggag
atggaactagagagaccacctccagtaaatagacatggtgaccagttgag
gcaggggcacccactgtcttcaaaaatttaaccagatcattcctgttaaa
ggaaattcatgtaccagattgacttgagctgagaggctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_15219404_15220545
seq2: B6Ng01-288K15.b_46_1191 (reverse)

seq1  TTTCATCAG-TCAGTTTATTATGAGAAG--TATCATGTGTA-TTTGTTTA  46
      ||||||||| ||||||||||||||||||  ||||||| ||| ||||||||
seq2  TTTCATCAGTTCAGTTTATTATGAGAAGGTTATCATGGGTATTTTGTTTA  50

seq1  TAATCT-CAAATGTAAATTTTTATTGTTG-AGCATTTATTTTCAAATAAT  94
      |||||| |||||||||  ||||||||||| ||||||||||||||||||||
seq2  TAATCTCCAAATGTAA--TTTTATTGTTGAAGCATTTATTTTCAAATAAT  98

seq1  CCAT-AACATCTCTAAGTGTAATGTAGATTCCAATGATGATATTATTCCC  143
      |||| |||||||||||||||||||||   |||||||||||||||||||||
seq2  CCATAAACATCTCTAAGTGTAATGTAAGATCCAATGATGATATTATTCCC  148

seq1  AATCGCTGCCAAAATTGTGGTTTGAAGTGCCAGTCAAGTTATAGCATATT  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGCTGCCAAAATTGTGGTTTGAAGTGCCAGTCAAGTTATAGCATATT  198

seq1  TTGCATAAAATCAATTTTTAAATAGTAGGCTTTTATTGTTTTAGATATAG  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATAAAATCAATTTTTAAATAGTAGGCTTTTATTGTTTTAGATATAG  248

seq1  TTGTCAAAATATAACCTATGCCATTTTTACTTTAAAGTAGTTAACTTAAG  293
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTGTCAAAATATAA-CTATGCCATTTTTACTTTAAAGTAGTTAACTTAAG  297

seq1  CAGAGTAATATGTTACCAAAACACACAGTATTAACACATATTTATTTTCA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTAATATGTTACCAAAACACACAGTATTAACACATATTTATTTTCA  347

seq1  GCCACAATCTTTAAGAGCTCCTTATGTATGTTTTTTACTTTGTGCAGAAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAATCTTTAAGAGCTCCTTATGTATGTTTTTTACTTTGTGCAGAAG  397

seq1  TGACACAAACTGCATATAAAAAAATTTTTAAAGTCAAGAGGAAAGTATCG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACAAACTGCATATAAAAAAATTTTTAAAGTCAAGAGGAAAGTATCG  447

seq1  AGGTTTAGTTTGTGTATTATAAAGATGAATGCTGGCCCTCAAGGTCTGAT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTAGTTTGTGTATTATAAAGATGAATGCTGGCCCTCAAGGTCTGAT  497

seq1  TGGCCACAGAGATAAAGAATTCCTCACTTATACCAAGTGGTACTATGTAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCACAGAGATAAAGAATTCCTCACTTATACCAAGTGGTACTATGTAA  547

seq1  CTCTGCTCTTTAATTTAAAACTATTGGCTGAATAAAGACGCCTCCAGCCA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTCTTTAATTTAAAACTATTGGCTGAATAAAGACGCCTCCAGCCA  597

seq1  ATAGCTGGGCAGAAGAGAAATAAGCAGTGCTTCAGTTCCCTGGCAATGGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTGGGCAGAAGAGAAATAAGCAGTGCTTCAGTTCCCTGGCAATGGA  647

seq1  GTCTAGGCGGTAACAAGAAGGGGTGGGGGAGTGGGTGGAGAGAGAAGAAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGGCGGTAACAAGAAGGGGTGGGGGAGTGGGTGGAGAGAGAAGAAA  697

seq1  ATGCTATGTGGTATGTGAATCATGAAAACATGATCATGAGGGATGACCAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATGTGGTATGTGAATCATGAAAACATGATCATGAGGGATGACCAA  747

seq1  TTGGAGTAAGAGAAGCCCAAGCAAAATATGGCATGTAATAACTTGGTATT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTAAGAGAAGCCCAAGCAAAATATGGCATGTAATAACTTGGTATT  797

seq1  ATTGACTGGAATATACACAAAATAGCATAGAGAGTTGATATATGCAAACT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACTGGAATATACACAAAATAGCATAGAGAGTTGATATATGCAAACT  847

seq1  CTAGTGCTGTTAACGCCTATTATACATGTAAAGGTTTTGTGTCTTTTAAC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGCTGTTAACGCCTATTATACATGTAAAGGTTTTGTGTCTTTTAAC  897

seq1  TGGGAATTGAATGATACAAGGCAGTTTAGAAAACCTGAAAAAATTTTACC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATTGAATGATACAAGGCAGTTTAGAAAACCTGAAAAAATTTTACC  947

seq1  ACAACATGTTGTTCAGCTTAAAGGAAGGTTAAAAAATTTACAAAATAATT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATGTTGTTCAGCTTAAAGGAAGGTTAAAAAATTTACAAAATAATT  997

seq1  GCAAAACTTTCAATTTTCTGAATAATATAGAAGTGTTAAAAATAAATACA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACTTTCAATTTTCTGAATAATATAGAAGTGTTAAAAATAAATACA  1047

seq1  GCATATATGTCTATCAAAAGAAAACAACAATAACTGAATAAAACCATTAA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATATGTCTATCAAAAGAAAACAACAATAACTGAATAAAACCATTAA  1097

seq1  AATCTTATTAAAGATGTCCCTGGAAAGAACTGCTGTAAGTTCTGAATTC  1142
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTATTAAAGATGTCCCTGGAAAGAACTGCTGTAAGTTCTGAATTC  1146


seq1: chr15_15133178_15134277
seq2: B6Ng01-288K15.g_71_1160

seq1  GAATTCAAAGTTAAAAAAATTCATCAACACAGGTATTTCCAAGGGATTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGTTAAAAAAATTCATCAACACAGGTATTTCCAAGGGATTAA  50

seq1  AATGTTTTGCTAAAATCATATAGACTAGTAAATATTTAAATTTCAAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTGCTAAAATCATATAGACTAGTAAATATTTAAATTTCAAAATA  100

seq1  TATCTTTTCTATTTATCTGCTTATTAATTTTGACATATAATGTACATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTTCTATTTATCTGCTTATTAATTTTGACATATAATGTACATTTA  150

seq1  CTACCAATTCTACAGGCCAGAAGGTTCTAAAGTGTAGTGACATTTTTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAATTCTACAGGCCAGAAGGTTCTAAAGTGTAGTGACATTTTTAGA  200

seq1  AGATTTAAGATTTCAACAAAGTTAAATCAATTATTCAGAGTAACATATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAAGATTTCAACAAAGTTAAATCAATTATTCAGAGTAACATATTA  250

seq1  GTGAGGAAGAAAATAAAATATGTAAACTCAGTAAAACAAAATAACTAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGAAGAAAATAAAATATGTAAACTCAGTAAAACAAAATAACTAACC  300

seq1  AGAGTCAATGAAATGAAACTTGCTTAGATTATTTGAAATTTGTTTTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCAATGAAATGAAACTTGCTTAGATTATTTGAAATTTGTTTTTGTT  350

seq1  TGTTTTATGCTAGAAAAGAAATGTCATTGGGGAAGATAATCACATTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATGCTAGAAAAGAAATGTCATTGGGGAAGATAATCACATTTTAA  400

seq1  AAGTTCTCCAAACTCACTGTTTTTCCCATAGTTCTGGGTAATCACAGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTCCAAACTCACTGTTTTTCCCATAGTTCTGGGTAATCACAGTGA  450

seq1  GTCATAAAACAAAGGGAAGCATCATAAACATTAGGAGAGATCTGTGACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATAAAACAAAGGGAAGCATCATAAACATTAGGAGAGATCTGTGACAA  500

seq1  GAGTTGAAGGTGACAAAGGAGGTGCAAAAGATTGGTTCATATACATTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGAAGGTGACAAAGGAGGTGCAAAAGATTGGTTCATATACATTGTA  550

seq1  TACATATACATGTCAAATTGTCTAAACACAAGTATACTTTGTAATAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATACATGTCAAATTGTCTAAACACAAGTATACTTTGTAATAAAAA  600

seq1  GAAAAAATCTGAACTTTTTGTCAAATATCCACTTATCAGTGAGTACATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAATCTGAACTTTTTGTCAAATATCCACTTATCAGTGAGTACATAC  650

seq1  CATGTGTGTTATTTTGAGACTGGGTTACGTCACTCAAAATACATCATGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTGTTATTTTGAGACTGGGTTACGTCACTCAAAATACATCATGTC  700

seq1  CTTGTTCTTAATAGTTGAAGAGTATTCCACTAGGTAAATGAGATGGAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCTTAATAGTTGAAGAGTATTCCACTAGGTAAATGAGATGGAGGA  750

seq1  AACTGAGTGGGAGAAAGAAGTTGGGGCAGGTATGGGGTGAGACAGAAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGTGGGAGAAAGAAGTTGGGGCAGGTATGGGGTGAGACAGAAGGT  800

seq1  ACACCCAGAGGGCCAGAAGAATGAATCTAAATATGCAATGGTGGGAGTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCAGAGGGCCAGAAGAATGAATCTAAATATGCAATGGTGGGAGTTA  850

seq1  TGGGACAGAGAAAACATCTAGAAAGTCCCAGAAACCTGGGATGTGAGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACAGAGAAAACATCTAGAAAGTCCCAGAAACCTGGGATGTGAGAGG  900

seq1  CTACCAGAATTCAACGGGGATGACAGTAGCTGAAATGCCAATAGTGTGGA  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTACCAGAATTCAACGGGGATGACAGTAGCTG-AATGCCAATAGTGTGGA  949

seq1  GATGGAACTAGAAGAGACCACCTCCAGTAAATAGACATGGTGACCAGTTG  1000
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GATGGAACTAG-AGAGACCACCTCCAGTAAATAGACATGGTGACCAGTTG  998

seq1  AGGCAGGGGCCACCCACTGTTCTTCAAAAATTTTAACCCAGAATCATTCC  1050
      ||||||||| ||||||||| |||||||||||||  | |||| ||||||||
seq2  AGGCAGGGG-CACCCACTG-TCTTCAAAAATTT--AACCAG-ATCATTCC  1043

seq1  TGTTTAAAGGAAATTCATGTACAAAAATGAACTTGAGCCTGAGAGGCTAT  1100
      || ||||||||||||||||||| | | || ||||||| ||||||||||||
seq2  TG-TTAAAGGAAATTCATGTACCAGATTG-ACTTGAG-CTGAGAGGCTAT  1090


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