MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-288M19
Chromosome	15 (Build37)	8 (Build37)
Map Location	91,249,920 - 91,250,710	45,684,613 - 45,685,753
singlet/doublet	singlet	singlet
Overlap gene	Slc2a13
Upstream gene	Cpne8, EG627342, LOC100042462, LOC100042471, EG667682, Tcea1-ps1, Spn-ps, Kif21a, EG635871, Abcd2, LOC545126
Downstream gene	Lrrk2, Muc19, Smgc, LOC100042529, Cntn1, Pdzrn4
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cpne8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66871 MGI:1914121
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG627342 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627342 MGI:3645488
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	LOC100042462 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042462
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 33 ESTs, 1 Protein pseudo : _no_value

name	LOC100042471 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042471
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	EG667682 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667682 MGI:3647726
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 704 ESTs, 7 Proteins

name	Tcea1-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56645 MGI:1861432
definition	note : transcription elongation factor A (SII) 1, pseudogene 1 pseudo : _no_value

name	Spn-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20738 MGI:104964
definition	gene_synonym : Cd43-ps note : sialophorin, pseudogene pseudo : _no_value

name	Kif21a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16564 MGI:109188
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG635871 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:635871 MGI:3647878
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins pseudo : _no_value

name	Abcd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26874 MGI:1349467
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545126 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545126
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Slc2a13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239606 MGI:2146030
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrrk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66725 MGI:1913975
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Muc19 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239611 MGI:2676278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smgc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223809 MGI:1859618
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042529 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042529
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 14 Proteins pseudo : _no_value

name	Cntn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12805 MGI:105980
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pdzrn4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239618 MGI:3056996
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 8 Proteins

name	Cpne8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76563926 GeneID:66871 MGI:1914121
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : copine VIII transcript_id : NM_025815.2

name	EG627342 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82957662 GeneID:627342 MGI:3645488
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG627342 transcript_id : XM_894970.1

name	Cpne8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76563927 GeneID:66871 MGI:1914121
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : copine VIII transcript_id : NM_001033851.1

name	EG667682 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149266790 GeneID:667682 MGI:3647726
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 704 ESTs, 7 Proteins product : predicted gene, EG667682 transcript_id : XM_991853.2

name	Kif21a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802459 GeneID:16564 MGI:109188
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kinesin family member 21A transcript_id : NM_016705.2

name	Abcd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:60218874 GeneID:26874 MGI:1349467
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family D (ALD), member 2 transcript_id : NM_011994.2

name	Slc2a13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803063 GeneID:239606 MGI:2146030
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 2 (facilitated glucose transporter), member 13 transcript_id : NM_001033633.2

name	Lrrk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56090486 GeneID:66725 MGI:1913975
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine-rich repeat kinase 2 transcript_id : NM_025730.2

name	Muc19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:48374046 GeneID:239611 MGI:2676278
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mucin 19 transcript_id : NM_207243.2

name	Smgc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376622 GeneID:223809 MGI:1859618
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : submandibular gland protein C transcript_id : NM_198927.2

name	Cntn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680953 GeneID:12805 MGI:105980
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : contactin 1 transcript_id : NM_007727.1

name	Pdzrn4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149266792 GeneID:239618 MGI:3056996
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 8 Proteins product : PDZ domain containing RING finger 4 transcript_id : XM_992218.2

name	Cpne8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21630253 CCDS:CCDS27758.1 GeneID:66871 MGI:1914121
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; copine 8 product : copine VIII isoform 1 protein_id : NP_080091.1

name	EG627342 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82957663 GeneID:627342 MGI:3645488
definition	codon_start : 1 product : similar to 39S ribosomal protein L30, mitochondrial precursor (L30mt) (MRP-L30) protein_id : XP_900063.1

name	Cpne8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76563928 CCDS:CCDS27759.1 GeneID:66871 MGI:1914121
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; copine 8 product : copine VIII isoform 2 protein_id : NP_001029023.1

name	EG667682 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149266791 GeneID:667682 MGI:3647726
definition	codon_start : 1 product : hypothetical protein protein_id : XP_996947.2

name	Kif21a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7710046 GeneID:16564 MGI:109188
definition	GO_component : GO:0005871 - kinesin complex [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0007017 - microtubule-based process [Evidence IEA] codon_start : 1 exception : mismatches in translation note : N-5 kinesin product : kinesin family member 21A protein_id : NP_057914.1

name	Abcd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60218875 CCDS:CCDS27760.1 GeneID:26874 MGI:1349467
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] codon_start : 1 note : adrenoleukodystrophy-like; adrenoleukodystrophy related product : ATP-binding cassette, sub-family D, member 2 protein_id : NP_036124.2

name	Slc2a13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76880476 CCDS:CCDS27761.1 GeneID:239606 MGI:2146030
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005351 - sugar porter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 2 (facilitated glucose transporter), member 13 protein_id : NP_001028805.1

name	Lrrk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56090487 GeneID:66725 MGI:1913975
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005488 - binding [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : leucine-rich repeat kinase 2 protein_id : NP_080006.2

name	Muc19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:48374047 GeneID:239611 MGI:2676278
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : unclassified translation discrepancy note : sublingual apomucin product : mucin 19 protein_id : NP_997126.2

name	Smgc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39204645 CCDS:CCDS27762.1 GeneID:223809 MGI:1859618
definition	codon_start : 1 product : neonatal submandibular gland protein C protein_id : NP_945121.1

name	Cntn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680954 CCDS:CCDS27763.1 GeneID:12805 MGI:105980
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA] GO_function : GO:0048503 - GPI anchor binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007219 - Notch signaling pathway [Evidence IEA] codon_start : 1 product : contactin 1 protein_id : NP_031753.1

name	Pdzrn4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149266793 GeneID:239618 MGI:3056996
definition	codon_start : 1 product : similar to PDZ domain-containing RING finger protein 4 (Ligand of Numb-protein X 4) (SEMACAP3-like protein) protein_id : XP_997312.2

name	LOC100042471 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042471
definition	number : 1 pseudo : _no_value

name	LOC545126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:545126
definition	number : 1 pseudo : _no_value

name	LOC545126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:545126
definition	number : 2 pseudo : _no_value

name	LOC545126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:545126
definition	number : 3 pseudo : _no_value

name	LOC545126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:545126
definition	number : 4 pseudo : _no_value

name	LOC545126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:545126
definition	number : 5 pseudo : _no_value

name	LOC545126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:545126
definition	number : 6 pseudo : _no_value

name	LOC545126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:545126
definition	number : 7 pseudo : _no_value

name	LOC545126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:545126
definition	number : 8 pseudo : _no_value

name	LOC545126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:545126
definition	number : 9 pseudo : _no_value

name	LOC545126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:545126
definition	number : 10 pseudo : _no_value

name	LOC545126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:545126
definition	number : 11 pseudo : _no_value

name	LOC545126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:545126
definition	number : 12 pseudo : _no_value

name	LOC545126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:545126
definition	number : 13 pseudo : _no_value

name	Spn-ps (CDS detail)
type	misc_feature
link	vega ensembl
xref
definition	gene_synonym : Cd43-ps note : region homologous with mouse leukosialin ORF pseudo : _no_value

name	LOC100042462 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266733 GeneID:100042462
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 33 ESTs, 1 Protein product : similar to poly(A) binding protein, cytoplasmic 4 pseudo : _no_value transcript_id : XR_033619.1

name	EG635871 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94398866 GeneID:635871 MGI:3647878
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins product : predicted gene, EG635871 pseudo : _no_value transcript_id : XR_002061.1

name	LOC100042529 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266735 GeneID:100042529
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 14 Proteins product : similar to leucine-rich glioma-inactivated 1 protein pseudo : _no_value transcript_id : XR_033669.1

clone name	MSMg01-112A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317M16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-298F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124D16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-087F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528M09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-439H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537A07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-519C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261O10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-288M19.b	B6Ng01-288M19.g
ACC	GA086370	GA086371
length	1,018	1,150
definition	B6Ng01-288M19.b	B6Ng01-288M19.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(91,249,920 - 91,250,710)	(45,684,613 - 45,685,753)
sequence	gaattcacgcagttgaatccttctcaacagtctgtgttgccggaacactt cattaccaccgttccccagctgaagagttctgaatccacactggatcctt ctcaacagtctgttttacgggaacacttcattaccatgacccgcagttct ggttccggaatgagggatcttccttgcgccggtgatggcaaccgtcccag gttttctcgtcccaggtcttctcgtcccgggtcttctcatcccgggtttt ctcgtcccgggtttcagcaccaactcttacacgcgttctcgcgaccggcc aggaagaacgcaacaaaccggaatcttctgcggcaaaagctttattgctt acatcttcaggagccagagagcaagagagcaagagcgcaagagagcaaga gagcaagagccagagcaagaaaaagaacaagaacaagaaagcaagaaaaa gaacaagagcaagaaagcaagagaaagagaaagaatggcaaaaccccatc ccttttaaggagaattatcctccgcctaggacgtattactccctgattgg ctgcagcccattggcccagttgtcatcacgagaaaggcagaacacatggc gggaaaattgcccctgcacgtgtgcagattatgtttaccacttagaacac agctgtcagcaccatcttataatggcaaatgtgagggcggctcccaacac aagcactaccgtcctggttgactctcagaaagcacttcttcagctttcta gggtgtctgaccttttgcttttcttgcataatgttgtcatgtacaaatat gtttggccacactcacagatattctggaatacctgctcccaataggttga aagttgtacatgcatgatagagggaccctcaacctgattctcaggtttaa gcaaccctaaagacagcataatactatatttggaactgttttgtctagcc tagttccaaaagtttcacaagaacttaaatggggtactgtagcatcctga gaattatgtctgcacaat	gaattccaaacatcacaccatcacagaaatgatctgtagctgacaaaatc actcccctgctagagcaccaggcaaatcatagtcagctgctgtggcacag ccccatatcccacacctggattaaaaccaaaacatatccttatattattt ctgtgttttttaaagcaaccaaacctccaaaattgtcactaggtatacat gctagaatggtgaacagtgaatgacatgtgctttaacaattctgtgtaaa gtgtgaaaacgaagatggggaatagacaaaagatgatcatgttgtggcat gggctgtagctgcctgtggtatgaggagaccaatgatggatgctggtacg ggttataaatgtagatggtcctcctggcccaccccttcccacactatcct gtctgtgtcatctgctttgatgcccaactcaggttcatgtgaggggcatt gggagggcctgctggaggatatgatttagctttgctgtcttggtccggtt gtttttaaaagaccctgtttaaatagtgtactattgtcacatttcaatac ctttgctagaaattcatacataaaatatcatatatgttcccctggtttaa tttcattctgcgtatgaaaaataaactgttttattactttacaatggaca aaaaagattgcacctgaggttttggtttactgcatccataaaaacatatt gttgtgacaaattaaatctggtaaggagaaagagaaaaattctccattta agtgatcgtggggcttaaagccacattggtgggtcagctcaaccatcttt ctgcccaaatcgggccatatgtgaactgctcccagacaagtgaaaactga ttctattgtaaagatttccatgaaagagtgcacaggaggctttgtttttc cctttaagacatgcacggcgtctgtgaatccatttttgtatcgtaacatg atagaaaataatggggaacaagattgtctgcttttaccagacctgaagga aatttatgctgaaatataaaaagacaagtgccggagacaactcacaggag aacctggcatgtaacttgtggaaccggcatcctcttgttttattaaaggt cagcaggccggccctataacttcagcctttgcatttaatttgggaggatt
quality values	Open. Hide. 47 20 24 24 62 38 15 47 56 47 37 56 56 62 62 35 23 26 62 62 54 62 62 62 44 42 59 59 43 62 62 62 59 59 62 43 30 25 21 23 25 25 32 36 29 48 56 59 62 62 59 59 62 62 62 62 59 59 62 62 62 62 62 54 54 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 54 48 54 50 56 59 46 34 59 51 62 62 59 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 59 62 62 54 54 62 62 62 59 62 59 62 62 59 54 62 59 54 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 59 62 59 62 62 62 62 62 59 62 59 59 62 62 62 62 59 62 62 59 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 56 56 62 51 62 62 62 62 62 62 62 44 62 62 62 56 51 56 62 50 56 44 56 56 51 51 54 39 62 56 56 50 56 56 62 56 62 56 56 56 56 56 62 56 62 62 56 56 47 43 56 56 56 56 62 56 56 56 56 51 62 56 62 56 56 56 62 56 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 38 47 62 54 52 62 62 62 54 62 62 62 62 62 62 54 58 58 58 58 58 31 34 58 42 58 58 54 58 42 45 58 54 58 58 58 58 58 58 54 58 58 54 54 32 58 45 54 58 54 49 46 58 52 58 58 58 58 58 58 58 58 41 58 58 58 54 58 58 58 42 52 54 58 54 38 54 58 58 58 48 58 58 52 42 54 58 58 54 54 52 58 58 52 54 52 58 42 58 58 46 38 45 40 54 52 58 47 51 50 58 50 51 58 58 58 54 58 58 58 58 58 40 41 58 58 42 49 58 58 51 58 54 42 53 50 54 54 53 58 50 50 52 53 41 47 50 37 51 43 58 43 50 49 53 46 58 58 58 50 50 58 49 50 52 53 50 29 51 52 50 52 54 52 37 53 37 47 51 37 51 53 52 51 38 42 41 50 43 51 49 50 50 54 43 41 58 41 50 43 40 58 40 38 33 41 27 58 40 58 52 39 31 49 42 53 31 50 49 52 42 45 52 50 40 58 52 42 52 54 40 49 28 33 53 45 41 28 54 49 42 42 39 21 49 54 42 39 43 43 34 36 32 41 45 45 42 26 32 53 45 54 54 53 32 31 32 54 54 31 52 33 53 43 47 39 22 53 42 54 54 49 35 37 45 54 54 53 53 39 41 47 37 32 45 40 53 40 51 29 53 52 37 45 31 34 51 29 32 53 29 52 32 42 40 42 45 34 53 34 40 40 21 52 35 45 28 42 53 42 39 45 28 34 53 36 45 29 23 45 39 31 19 25 33 28 31 34 45 43 45 35 39 38 51 31 24 44 31 21 18 31 23 31 31 38 51 46 33 24 33 31 21 26 33 26 31 31 31 29 31 38 33 25 38 32 37 21 46 32 31 28 46 38 38 31 25 32 37 31 30 31 31 30 33 36 31 30 23 25 33 31 46 28 30 35 23 30 25 30 33 48 31 31 16 46 6 9 14 21 31 25 31 27 30 23 20 30 27 31 21 16 25 23 30 48 37 31 31 19 31 31 34 38 38 48 44 31 31 21 36 31 31 24 35 31 20 31 18 19 27 16 21 12 24 28 7 5 5 36 17 27 18 34 15 18 15 29 19 33 13 25 11 37 28 32 22 48 48 19 21 29 30 28 18 6 16 27 34 28 22 25 23 25 30 29 12 21 37 10 24 10 25 29 18 19 14 26 27 9 7 5 10 32	Open. Hide. 46 20 44 47 62 62 47 32 62 62 59 44 62 25 17 39 18 29 24 16 28 21 56 59 49 54 54 62 62 59 62 59 59 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 59 56 59 56 30 54 59 59 59 59 62 62 59 62 62 62 62 62 62 62 59 62 62 59 62 62 59 62 62 54 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 59 62 62 62 62 62 62 62 62 62 62 62 59 62 54 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 54 42 62 49 42 62 54 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 50 62 58 58 48 52 58 58 58 54 58 41 58 58 58 58 58 58 58 49 58 58 58 58 58 58 58 54 58 54 54 58 58 58 58 58 58 54 58 58 58 58 58 58 52 58 58 54 58 58 58 58 58 58 58 54 54 47 58 58 42 54 54 54 52 58 58 58 54 58 58 58 58 51 52 51 47 54 51 58 51 58 51 58 58 58 43 58 58 58 58 54 45 42 51 58 49 41 51 50 58 58 51 50 46 58 58 51 58 53 58 41 52 52 58 58 58 58 58 54 50 49 58 54 54 58 58 53 58 58 54 53 39 51 40 53 58 58 41 50 50 32 58 50 58 43 44 46 39 58 58 58 58 58 52 50 24 43 54 51 32 41 58 53 58 33 13 38 29 58 58 50 51 39 42 58 51 40 39 53 58 49 32 53 42 47 32 51 32 58 54 49 40 49 31 52 42 39 53 54 37 49 51 52 49 35 32 31 54 49 37 30 50 49 54 51 49 52 54 46 19 27 25 30 54 49 32 49 38 44 41 54 37 53 54 54 54 30 41 52 53 41 54 37 34 32 54 46 35 40 33 38 38 39 33 42 35 33 52 54 54 41 33 49 37 31 54 45 37 35 52 26 34 25 47 30 51 41 21 32 53 52 32 31 32 28 45 47 35 29 20 32 45 31 45 53 52 51 41 32 31 40 32 53 27 25 46 24 31 32 30 46 45 31 38 25 31 29 31 40 40 20 21 32 23 31 45 36 36 38 51 32 25 20 38 32 31 33 31 42 32 31 51 46 30 30 38 37 30 29 33 29 31 23 16 21 32 14 15 47 42 26 16 8 46 29 27 33 25 31 31 41 46 38 20 29 13 28 24 15 23 31 21 15 22 30 8 14 23 31 46 7 15 7 48 48 48 26 31 46 31 20 37 18 31 29 18 19 15 24 32 36 23 35 24 24 21 29 31 21 29 19 31 27 31 46 38 19 33 30 33 26 31 44 27 13 26 22 27 19 11 15 18 37 35 29 21 31 31 20 17 32 16 35 44 44 8 17 13 30 19 18 44 44 11 29 9 29 7 26 26 32 18 18 31 29 34 32 34 32 25 43 43 21 21 20 22 27 14 19 8 30 31 32 21 24 27 27 17 39 6 34 37 31 10 12 32 32 20 15 23 33 14 21 14 16 9 43 48 37 12 9 17 6 11 11 22 18 28 9 9 21 4 4 6 21 9 9 18 5 16 20 18 24 7 8 7 18 10 14 14 5 17 16 14 9 22 22 11 20 15 7 11 7 10 7 6 7 4 5 25 27 5 8 15 11 25 6 16 25 11 16 19 11 8 6 7 26 27 5 6 14 7 5 28 15 8 6 6 6 11 6 5 3 5 8 17 3 2 3 4 23 5 10 4 4 11 10 14 21 11 9 9 11 8 4 17 17 19 10 11 8 18 29 13 2 6 20 28 25 5 7 3 4 6 7 9 5 2

Alignment Information

BAC End 1

BAC End 2

seq1: chr15_91249920_91250710
seq2: B6Ng01-288M19.b_47_740 (reverse)

seq1  GGAGCCGCCCTCACATTTGCCATTATAAGATGGCGCTGACAGCTGTGTTC  50
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GGAGCCGCCCTCACATTTGCCATTATAAGATGGTGCTGACAGCTGTGTTC  50

seq1  TAAGTGGTAAACATAATCTGCACACGTGCAGGGGCAGTTTTCCCGCCATG  100
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TAAGTGGTAAACATAATCTGCACACGTGCAGGGGCAATTTTCCCGCCATG  100

seq1  TGTTCTGCCTTTCCCGTGATGACAACTGAGCCGATGGGCTGCAGCCAATC  150
      ||||||||||||| |||||||||||||| ||| |||||||||||||||||
seq2  TGTTCTGCCTTTCTCGTGATGACAACTGGGCCAATGGGCTGCAGCCAATC  150

seq1  AGGGAGTAATACGTCCCAGGCGGAGGATAATTCTCCTTAAAAGGGACGGG  200
      |||||||||||||||| ||||||||||||||||||||||||||||| |||
seq2  AGGGAGTAATACGTCCTAGGCGGAGGATAATTCTCCTTAAAAGGGATGGG  200

seq1  GTTTTGCCA------CTCTCTCTCTTGCTTTCT--------TTCTCTCTC  236
      |||||||||      |||| |||||||||||||        |||| | ||
seq2  GTTTTGCCATTCTTTCTCTTTCTCTTGCTTTCTTGCTCTTGTTCTTTTTC  250

seq1  TTGCTTTCTTGTTCTTGTTCTTTT------------TCTTGCTTTCTTG-  273
      ||||||||||||||||||||||||            ||||||| ||||| 
seq2  TTGCTTTCTTGTTCTTGTTCTTTTTCTTGCTCTGGCTCTTGCTCTCTTGC  300

seq1  -CTCTTGCTCTCTTGCTCTCTTGCTCTCTGGCTCCTGAAGATGTAAGCAA  322
       ||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGCGCTCTTGCTCTCTTGCTCTCTGGCTCCTGAAGATGTAAGCAA  350

seq1  TAAAGC-TTTGCCGCAGAAGATTACGGTTTGTTGCGTCTTTCCTGGCCGG  371
      |||||| |||||||||||||||| |||||||||||||  |||||||||||
seq2  TAAAGCTTTTGCCGCAGAAGATTCCGGTTTGTTGCGTTCTTCCTGGCCGG  400

seq1  TTGCGAGAACGCGTGTAAGAGTTGGTGCCGAAACCCGGGAAGAGTTGGTG  421
      | |||||||||||||||||||||||||| ||||||               
seq2  TCGCGAGAACGCGTGTAAGAGTTGGTGCTGAAACC---------------  435

seq1  CTGAGACCCGGGACGGGACGAGAAGACCTGGGACGAGAAGACCCGGGACG  471
                   ||||||||||| ||| |||| ||||||||||||||||
seq2  -------------CGGGACGAGAAAACCCGGGATGAGAAGACCCGGGACG  472

seq1  AGAAGACCTGGGACGAGAAATCCTGGGACGAGAAAACCTGGGACGGTTAC  521
      ||||||               ||||||||||||||||||||||||||| |
seq2  AGAAGA---------------CCTGGGACGAGAAAACCTGGGACGGTTGC  507

seq1  CATCACCGGCGCAAGGAAGATCCCTCATTCCGGAACCAGAACTGCGGGTC  571
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCGGCGCAAGGAAGATCCCTCATTCCGGAACCAGAACTGCGGGTC  557

seq1  ATGGTAATGAAG-GTTCCCGTAAAACAGACTGTTGAGAAGGATTCAACTG  620
      |||||||||||| |||||||||||||||||||||||||||||| ||   |
seq2  ATGGTAATGAAGTGTTCCCGTAAAACAGACTGTTGAGAAGGATCCA---G  604

seq1  TGTGAATTCAGAACTCTTCAGCTGGGGAACGGTGGTAATGAAGTGTTCCC  670
      |||| |||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGTGGATTCAGAACTCTTCAGCTGGGGAACGGTGGTAATGAAGTGTTCCG  654

seq1  GTAAAACAGACTGTTGAGAAGGATTCAACTGCGTGAATTCAGAACTCTTC  720
      | || |||||||||||||||||||||||||||||||||||          
seq2  GCAACACAGACTGTTGAGAAGGATTCAACTGCGTGAATTC----------  694

seq1  AGCTGGGGAACGGTGGTAATAAAGTGTTCCCACAACACAGACTGTTGAGA  770
                                                        
seq2  --------------------------------------------------  694

seq1  AGGATTCAACTGCGTGAATTC  791
                           
seq2  ---------------------  694

seq1: chr8_45684613_45685753
seq2: B6Ng01-288M19.g_71_1220

seq1  GAATTCCAAACATCACACCATCACAGAAATGATCTGTAGCTGACAAAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAACATCACACCATCACAGAAATGATCTGTAGCTGACAAAATC  50

seq1  ACTCCCCTGCTAGAGCACCAGGCAAATCATAGTCAGCTGCTGTGGCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCTGCTAGAGCACCAGGCAAATCATAGTCAGCTGCTGTGGCACAG  100

seq1  CCCCATATCCCACACCTGGATTAAAACCAAAACATATCCTTATATTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATATCCCACACCTGGATTAAAACCAAAACATATCCTTATATTATTT  150

seq1  CTGTGTTTTTTAAAGCAACCAAACCTCCAAAATTGTCACTAGGTATACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTTTTTAAAGCAACCAAACCTCCAAAATTGTCACTAGGTATACAT  200

seq1  GCTAGAATGGTGAACAGTGAATGACATGTGCTTTAACAATTCTGTGTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAATGGTGAACAGTGAATGACATGTGCTTTAACAATTCTGTGTAAA  250

seq1  GTGTGAAAACGAAGATGGGGAATAGACAAAAGATGATCATGTTGTGGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAAAACGAAGATGGGGAATAGACAAAAGATGATCATGTTGTGGCAT  300

seq1  GGGCTGTAGCTGCCTGTGGTATGAGGAGACCAATGATGGATGCTGGTACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGTAGCTGCCTGTGGTATGAGGAGACCAATGATGGATGCTGGTACG  350

seq1  GGTTATAAATGTAGATGGTCCTCCTGGCCCACCCCTTCCCACACTATCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATAAATGTAGATGGTCCTCCTGGCCCACCCCTTCCCACACTATCCT  400

seq1  GTCTGTGTCATCTGCTTTGATGCCCAACTCAGGTTCATGTGAGGGGCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGTCATCTGCTTTGATGCCCAACTCAGGTTCATGTGAGGGGCATT  450

seq1  GGGAGGGCCTGCTGGAGGATATGATTTAGCTTTGCTGTCTTGGTCCGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGCCTGCTGGAGGATATGATTTAGCTTTGCTGTCTTGGTCCGGTT  500

seq1  GTTTTTAAAAGACCCTGTTTAAATAGTGTACTATTGTCACATTTCAATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAAAAGACCCTGTTTAAATAGTGTACTATTGTCACATTTCAATAC  550

seq1  CTTTGCTAGAAATTCATACATAAAATATCATATATGTTCCCCTGGTTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTAGAAATTCATACATAAAATATCATATATGTTCCCCTGGTTTAA  600

seq1  TTTCATTCTGCGTATGAAAAATAAACTGTTTTATTACTTTACAATGGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTCTGCGTATGAAAAATAAACTGTTTTATTACTTTACAATGGACA  650

seq1  AAAAAGATTGCACCTGAGGTTTTGGTTTACTGCATCCATAAAAACATATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGATTGCACCTGAGGTTTTGGTTTACTGCATCCATAAAAACATATT  700

seq1  GTTGTGACAAATTAAATCTGGTAAGGAGAAAGAGAAAAATTCTCCATTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGACAAATTAAATCTGGTAAGGAGAAAGAGAAAAATTCTCCATTTA  750

seq1  AGTGATCGTGGGGCTTAAAGCCACATTGGTGGGTCAGCTCAACCATCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATCGTGGGGCTTAAAGCCACATTGGTGGGTCAGCTCAACCATCTTT  800

seq1  CTGCCCAAATCGGGCCATATGTGAACTGCTCCCAGACAAGTGAAAACTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCAAATCGGGCCATATGTGAACTGCTCCCAGACAAGTGAAAACTGA  850

seq1  TTCTATTGTAAAGATTTCCATGAAAGAGTGCACAGGAGGC-TTGTTTT--  897
      |||||||||||||||||||||||||||||||||||||||| |||||||  
seq2  TTCTATTGTAAAGATTTCCATGAAAGAGTGCACAGGAGGCTTTGTTTTTC  900

seq1  CCCTTAAGACATGCACGGCGTCTGTGAAATCCA-TTTTGTATCGTAACAT  946
      || ||||||||||||||||||||||| |||||| ||||||||||||||||
seq2  CCTTTAAGACATGCACGGCGTCTGTG-AATCCATTTTTGTATCGTAACAT  949

seq1  GATAG-AAATAAT-GGGAACAAGATTGTCTGCTTTTACCAGACCTG-AGG  993
      ||||| ||||||| |||||||||||||||||||||||||||||||| |||
seq2  GATAGAAAATAATGGGGAACAAGATTGTCTGCTTTTACCAGACCTGAAGG  999

seq1  AATTTTATGCTGAAATAT-AAAAGACAAGTGCGGAAGACAAACTCACA-G  1041
      || ||||||||||||||| ||||||||||||| | |||| |||||||| |
seq2  AAATTTATGCTGAAATATAAAAAGACAAGTGCCGGAGAC-AACTCACAGG  1048

seq1  AGAACCTGGCATGTAAC-TGTTGAAACGGCATCCTC-TGTTTTATTAAAG  1089
      ||||||||||||||||| ||| ||| |||||||||| |||||||||||||
seq2  AGAACCTGGCATGTAACTTGTGGAACCGGCATCCTCTTGTTTTATTAAAG  1098

seq1  TCAAGCAAGCCCGGCCTATAACTTCAGCTTTTGCATTTTAATTTGGAGGA  1139
         |||| ||| | |||||||||||||| ||||||||| | || ||||||
seq2  GTCAGCAGGCCGGCCCTATAACTTCAGCCTTTGCATTTAATTTGGGAGGA  1148

seq1  TT  1141
      ||
seq2  TT  1150

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Alignment Information