BAC Information

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BAC

Clone NameB6Ng01-290H15
Chromosome15 (Build37)
Map Location 26,149,778 - 26,257,510
singlet/doubletdoublet
Overlap geneAK162044
Upstream gene4930445E18Rik, Basp1, EG432939, LOC100040583, Myo10, LOC100040602, Ppia-ps15_175.1, 1810015C04Rik, Zfp622
Downstream geneFbxl7, LOC622531, LOC625311
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290H15.bB6Ng01-290H15.g
ACCGA087610GA087611
length1,1761,150
definitionB6Ng01-290H15.b B6Ng01-290H15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,256,337 - 26,257,510)(26,149,778 - 26,150,919)
sequence
gaattcactctgtttgagttcacacgccttctaatcttaaactactgtaa
aattatttcaaaaatgcctaagagtttaatgtttaacctgaccaatacat
gatatatgtacttgttaaacatattctgttaatatattatattatatata
catgtgtgtgtgtgcctagccaaatagaaaatttcattcacaccgattag
ctaagcaatgatacatgatacatctttttgtcattgagttttaaaaacat
tttaactaaatgtctactttaaaatgaaaaccttaaatgagtttaatgtt
ggtcatgttcatgtccaagtacagagataaccttaacccagagaactttg
agcaggactccaagaacataaccttggttcctgtgagacactagagggca
gagttgcacagggaagtttttctgccaccaaactggaaaggaccttgact
gtttcttgctctatatttatttgaaaaggtttctaaacttttgagcctaa
acttttccatgatgaaaccaaacaataaacctagagaagatctgatggag
aatactgttctataaatggctgttcctccttcttgcgatgaacatcacag
tccctaagacgtgactgctgcttttcttctgaatgaaagactctcagctg
ccaaggcacacttgtggactttaaaagctggaggtgttgagttactagtg
acttgccccaccaaattttgggaagcaagtattccattcatgttaatcaa
gtgccataagatcaaagataatctctccaggccattaaaagttttctgaa
gaaagaattctcaccctccagaatcttttatagccacattccctataaat
ggcagagatgcaaaaataatatgggctgtccagaatccattgcactgata
aatgaagcccatttatttccaaatggattctggaaaggccaagtatcaat
ttgcacagctccaggagcaacagaaagtcattcccccaccctctaagtca
ttgcatgtcttttcactgtggccagtcatttcagaatacctcaatatatc
tcaattattattatgctgacatcagagcatcaggcatcattctccaaaca
agccttagttcagcgaacatagatgagatgactgaactgctctgccatcc
aatcattctcaggaacctgtgttttt

gaattcttttaataaaatttgaaattcacagttaatggctatatatattt
aaatgacacacatttattgcctcacataatttattgcatacattaagcat
aaaatttcctgtgggcaataataaatgtgatttataagtcacaatttgta
ggaagtctgtttcttattctcctgaggacagttccaaaaaccattaaaat
attagaaaaaaattggagatttattcattcaagcaataatatttgtttta
gtttactttaaaatatgttttaaatgaattttatatttaccttactaaaa
ttataaaaattgtcaaaaatgatgaagttttgaggctttggcgtctttgt
cttaatcatcttaggttacaataatttttaaatttctcatgtgtttccaa
atgagtacataaactttctgtcaaaagccaatggagatatgttatataaa
aacttaaaatttaaaaataagaaagtaaaaatgtaggtaattcttgttgg
aaaattcaaaacaactctcccaacatttatgggtttgtattgaatataat
tttaaattttagacataagcattttgaatgactgagatattatagtttta
tatgaagtatagtaatgtgcgttttagttaataattttaagctttccatg
ttaatgttgtaagccattaggtaccgatgctccttgatgtaggacatatt
tatttcctgaaaaatccatcattagtttcaacattgtggcttggatgaac
agcagtgggctgacagggcatgtggcttgctgtgccatgcaggtccccga
gagaaaattgtgtactgcattactagtccagtgatggactgaaatgtaaa
aacccatgtgaggtttctgagagaatagtgcctccaccccatgaggtgga
caagtcagaagttcaaccacagtaaatcagccatgggttacatatacacc
atattataactgcaccgatcttttcccaagcatttgggacagatggtttg
acccgagactaattgacactagactgtgcatcacattcttcttaagtcgg
ttgaaggcctgcattctagaacaattagggcagctactcttacagacctc
cttgcagtcagttggaataacacttttataagaaaacactctctcatttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_26256337_26257510
seq2: B6Ng01-290H15.b_44_1219 (reverse)

seq1  AAAAACACA-GTTCCTGAGATGAATGGGTTTGCAGAGCAGTTCAGTCATC  49
      ||||||||| ||||||||||   || || | |||||||||||||||||||
seq2  AAAAACACAGGTTCCTGAGAATGATTGGATGGCAGAGCAGTTCAGTCATC  50

seq1  TCATCTAATGTCGCCTGGAAACT-AGGC-TGTTTGGAGAATGAATGCTTG  97
      |||||| ||||   |||  |||| |||| ||||||||||||| |||| ||
seq2  TCATCT-ATGTTCGCTG--AACTAAGGCTTGTTTGGAGAATG-ATGCCTG  96

seq1  ATGCTCTGATGTTCAGCATAAT-ATAATTGAGATATATTGAGGTA-TCTT  145
      ||||||||||| |||||||||| |||||||||||||||||||||| ||| 
seq2  ATGCTCTGATG-TCAGCATAATAATAATTGAGATATATTGAGGTATTCTG  145

seq1  GAATGACTTGGCCACAGTG-AAAGACATGCAATGACTTAGAGGGT-GGGG  193
       |||||| ||||||||||| ||||||||||||||||||||||||| ||||
seq2  AAATGAC-TGGCCACAGTGAAAAGACATGCAATGACTTAGAGGGTGGGGG  194

seq1  AATGACTTTCTGTTGCTCCTGGAGCTGTGCAAATTGATACTTGGCC-TTC  242
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AATGACTTTCTGTTGCTCCTGGAGCTGTGCAAATTGATACTTGGCCTTTC  244

seq1  CAGAATCCATTTGGAAATAAATGGGCTTCATTTATCAGTGCAATGGATTC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCCATTTGGAAATAAATGGGCTTCATTTATCAGTGCAATGGATTC  294

seq1  TGGACAGCCCATATTATTTTTGCATCTCTGCCATTTATAGGGAATGTGGC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGCCCATATTATTTTTGCATCTCTGCCATTTATAGGGAATGTGGC  344

seq1  TATAAAAGATTCTGGAGGGTGAGAATTCTTTCTTCAGAAAACTTTTAATG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAGATTCTGGAGGGTGAGAATTCTTTCTTCAGAAAACTTTTAATG  394

seq1  GCCTGGAGAGATTATCTTTGATCTTATGGCACTTGATTAACATGAATGGA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGAGAGATTATCTTTGATCTTATGGCACTTGATTAACATGAATGGA  444

seq1  ATACTTGCTTCCCAAAATTTGGTGGGGCAAGTCACTAGTAACTCAACACC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTGCTTCCCAAAATTTGGTGGGGCAAGTCACTAGTAACTCAACACC  494

seq1  TCCAGCTTTTAAAGTCCACAAGTGTGCCTTGGCAGCTGAGAGTCTTTCAT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTTTTAAAGTCCACAAGTGTGCCTTGGCAGCTGAGAGTCTTTCAT  544

seq1  TCAGAAGAAAAGCAGCAGTCACGTCTTAGGGACTGTGATGTTCATCGCAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGAAAAGCAGCAGTCACGTCTTAGGGACTGTGATGTTCATCGCAA  594

seq1  GAAGGAGGAACAGCCATTTATAGAACAGTATTCTCCATCAGATCTTCTCT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGGAACAGCCATTTATAGAACAGTATTCTCCATCAGATCTTCTCT  644

seq1  AGGTTTATTGTTTGGTTTCATCATGGAAAAGTTTAGGCTCAAAAGTTTAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTATTGTTTGGTTTCATCATGGAAAAGTTTAGGCTCAAAAGTTTAG  694

seq1  AAACCTTTTCAAATAAATATAGAGCAAGAAACAGTCAAGGTCCTTTCCAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTTTCAAATAAATATAGAGCAAGAAACAGTCAAGGTCCTTTCCAG  744

seq1  TTTGGTGGCAGAAAAACTTCCCTGTGCAACTCTGCCCTCTAGTGTCTCAC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGGCAGAAAAACTTCCCTGTGCAACTCTGCCCTCTAGTGTCTCAC  794

seq1  AGGAACCAAGGTTATGTTCTTGGAGTCCTGCTCAAAGTTCTCTGGGTTAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCAAGGTTATGTTCTTGGAGTCCTGCTCAAAGTTCTCTGGGTTAA  844

seq1  GGTTATCTCTGTACTTGGACATGAACATGACCAACATTAAACTCATTTAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATCTCTGTACTTGGACATGAACATGACCAACATTAAACTCATTTAA  894

seq1  GGTTTTCATTTTAAAGTAGACATTTAGTTAAAATGTTTTTAAAACTCAAT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTCATTTTAAAGTAGACATTTAGTTAAAATGTTTTTAAAACTCAAT  944

seq1  GACAAAAAGATGTATCATGTATCATTGCTTAGCTAATCGGTGTGAATGAA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAAAGATGTATCATGTATCATTGCTTAGCTAATCGGTGTGAATGAA  994

seq1  ATTTTCTATTTGGCTAGGCACACACACACATGTATATATAATATAATATA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTATTTGGCTAGGCACACACACACATGTATATATAATATAATATA  1044

seq1  TTAACAGAATATGTTTAACAAGTACATATATCATGTATTGGTCAGGTTAA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGAATATGTTTAACAAGTACATATATCATGTATTGGTCAGGTTAA  1094

seq1  ACATTAAACTCTTAGGCATTTTTGAAATAATTTTACAGTAGTTTAAGATT  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAAACTCTTAGGCATTTTTGAAATAATTTTACAGTAGTTTAAGATT  1144

seq1  AGAAGGCGTGTGAACTCAAACAGAGTGAATTC  1174
      ||||||||||||||||||||||||||||||||
seq2  AGAAGGCGTGTGAACTCAAACAGAGTGAATTC  1176


seq1: chr15_26149778_26150919
seq2: B6Ng01-290H15.g_65_1214

seq1  GAATTCTTTTAATAAAATTTGAAATTCACAGTTAATGGCTATATATATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTAATAAAATTTGAAATTCACAGTTAATGGCTATATATATTT  50

seq1  AAATGACACACATTTATTGCCTCACATAATTTATTGCATACATTAAGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACACACATTTATTGCCTCACATAATTTATTGCATACATTAAGCAT  100

seq1  AAAATTTCCTGTGGGCAATAATAAATGTGATTTATAAGTCACAATTTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTCCTGTGGGCAATAATAAATGTGATTTATAAGTCACAATTTGTA  150

seq1  GGAAGTCTGTTTCTTATTCTCCTGAGGACAGTTCCAAAAACCATTAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCTGTTTCTTATTCTCCTGAGGACAGTTCCAAAAACCATTAAAAT  200

seq1  ATTAGAAAAAAATTGGAGATTTATTCATTCAAGCAATAATATTTGTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAAAAAAATTGGAGATTTATTCATTCAAGCAATAATATTTGTTTTA  250

seq1  GTTTACTTTAAAATATGTTTTAAATGAATTTTATATTTACCTTACTAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTTTAAAATATGTTTTAAATGAATTTTATATTTACCTTACTAAAA  300

seq1  TTATAAAAATTGTCAAAAATGATGAAGTTTTGAGGCTTTGGCGTCTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAAATTGTCAAAAATGATGAAGTTTTGAGGCTTTGGCGTCTTTGT  350

seq1  CTTAATCATCTTAGGTTACAATAATTTTTAAATTTCTCATGTGTTTCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATCATCTTAGGTTACAATAATTTTTAAATTTCTCATGTGTTTCCAA  400

seq1  ATGAGTACATAAACTTTCTGTCAAAAGCCAATGGAGATATGTTATATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTACATAAACTTTCTGTCAAAAGCCAATGGAGATATGTTATATAAA  450

seq1  AACTTAAAATTTAAAAATAAGAAAGTAAAAATGTAGGTAATTCTTGTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAAATTTAAAAATAAGAAAGTAAAAATGTAGGTAATTCTTGTTGG  500

seq1  AAAATTCAAAACAACTCTCCCAACATTTATGGGTTTGTATTGAATATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCAAAACAACTCTCCCAACATTTATGGGTTTGTATTGAATATAAT  550

seq1  TTTAAATTTTAGACATAAGCATTTTGAATGACTGAGATATTATAGTTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTTTAGACATAAGCATTTTGAATGACTGAGATATTATAGTTTTA  600

seq1  TATGAAGTATAGTAATGTGCGTTTTAGTTAATAATTTTAAGCTTTCCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGTATAGTAATGTGCGTTTTAGTTAATAATTTTAAGCTTTCCATG  650

seq1  TTAATGTTGTAAGCCATTAGGTACCGATGCTCCTTGATGTAGGACATATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTTGTAAGCCATTAGGTACCGATGCTCCTTGATGTAGGACATATT  700

seq1  TATTTCCTGAAAAATCCATCATTAGTTTCAACATTGTGGCTTGGATGAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCTGAAAAATCCATCATTAGTTTCAACATTGTGGCTTGGATGAAC  750

seq1  AGCAGTGGGCTGACAGGGCATGTGGCTTGCTGTGCCATGCAGGTCCCCGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGGGCTGACAGGGCATGTGGCTTGCTGTGCCATGCAGGTCCCCGA  800

seq1  GAGAAAATTGTGTACTGCATTACTAGTCCAGTGATGGACTGAAATGTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAATTGTGTACTGCATTACTAGTCCAGTGATGGACTGAAATGTAAA  850

seq1  AACCCATGTGAGGTTTCTGAGAGAATAGTGCCTCCACCCCATGAGGTGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCATGTGAGGTTTCTGAGAGAATAGTGCCTCCACCCCATGAGGTGGA  900

seq1  CAAGTCAGAAGTTCAACCACAGTAAATCAGCCAT-GGTTACATATACACC  949
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CAAGTCAGAAGTTCAACCACAGTAAATCAGCCATGGGTTACATATACACC  950

seq1  ATATTATAACTGCACCGATC-TTTCCCAAGCATTT-GGACAGATGGTTTG  997
      |||||||||||||||||||| |||||||||||||| ||||||||||||||
seq2  ATATTATAACTGCACCGATCTTTTCCCAAGCATTTGGGACAGATGGTTTG  1000

seq1  ACCCGAGACTAATTGACACTAAGACTGTGCATCACA-TCTTCTTAAGTCG  1046
      |||||||||||||||||||| ||||||||||||||| |||||||||||||
seq2  ACCCGAGACTAATTGACACT-AGACTGTGCATCACATTCTTCTTAAGTCG  1049

seq1  G-TGAA-GCCTGCATTCTAGAACAA-TAGGGCAGGCCAACTCTACCAGAC  1093
      | |||| |||||||||||||||||| ||||||||  | |||||  |||||
seq2  GTTGAAGGCCTGCATTCTAGAACAATTAGGGCAG--CTACTCTTACAGAC  1097

seq1  CTCC-TGCAGTCAGTTGGAAATAACAC-TTTATAAGAA---ACACTCTCA  1138
      |||| ||||||||||||| |||||||| ||||||||||   || ||||||
seq2  CTCCTTGCAGTCAGTTGG-AATAACACTTTTATAAGAAAACACTCTCTCA  1146

seq1  TTTG  1142
      ||||
seq2  TTTG  1150


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