BAC Information

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BAC

Clone NameB6Ng01-291K09
Chromosome15 (Build37)
Map Location 7,084,301 - 7,192,442
singlet/doubletdoublet
Overlap geneLifr, Egflam
Upstream geneDab2, C9, LOC100039396, LOC100039412, Fyb, LOC100039453, EG665511, 4921505C17Rik, Osmr
Downstream geneGdnf, Wdr70, LOC665556, LOC621001, Nup155, 2410089E03Rik, LOC100039599
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291K09.bB6Ng01-291K09.g
ACCGA088481GA088482
length9251,007
definitionB6Ng01-291K09.b B6Ng01-291K09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,191,518 - 7,192,442)(7,084,301 - 7,085,299)
sequence
gaattccgcttcgactgtggttctgggacgggagttctcaggtgagggcc
aaggccttgtacaacttcctcccctccaaaccacagccaccactgtgacc
actaaatggccaaccgccatcctcttcctgttttctctttgctagtgttc
tgtgaaagcctgtgctgcttctgaactatgccagatgatctccccccctc
cccctctctccccctctctctcccttcttccctctcttccttttccccct
tccctctccctcctttcctcactctccctccctcccccttccctctccct
ccttccttctctctctccctcctcccctcacttcctccctctccttccac
cctctttcctcctctctctcctcccctcctctcttccttccttcctttca
ccaaatacttatcaaacaggtattaattcctagcttctgtttaatggaaa
atgaccttgcttcctgtgggggctacaataacccattcccacctttcaca
gagaagcatatgttgggcacatttccttcccaactttgtgttttttttta
ataacccactatatcgggttagtgtttgtagataggagaccgtccactat
agcacaggaatcctcccagtgcccacatcctacaaagagtgtaggaaact
ctgtttctccctcctccagccactcccaactgccaatagctcctttgatg
aggctcgggacctaggtttcaacctccatctcttcgtccaggactttgcc
tggctcagtcttgggctggtaactgcagctgcaacgagttcacctctgcc
atagctgtattggcatccagaagacagaatgctaaagcactcgtacctct
gctctacagtctgccgtctcggcttcttactaatccctgaccatggtagc
atgggagacggtggggtgggaaatc
gaattccagttgtcatacattgtcttgagtaatgctgcatgtgttccttc
tagacacttgcactgcccctgctgacgcaggctgaaggtggtgctcgcaa
gccttgcccactcagtgttgggaggtgaggaggaatttttggcgtatgtt
tttggtttctaatgtacttttgcacggtgggaagtttttggctctccttc
attcttttggcttctaaggctgaataagttggaattagcattcatgtcta
gaatcgagcataatcttgttatgtggtggtatcttgaagggccactaggg
ggcaatatttctttctgaaggtccgtgtgtgtctgggttaagccttcatc
cccgaagcacacacttctgtaagaagttcttagatccaaggacagttgac
acggtggtagcaggaacatctggtggaaaataacaagtgctgacagaagt
acttccctgcttctaacattagaaaacgctaacggggcagatgggttgta
attgtcctgtggacagaaccttgtgagttggctgagccctggtggtggta
ggatgaaggtgagaccgtggcccacacttacatgctgtaacctctggggc
tgtttgagggccactgtggacattagggcgtgatgacaagatgccagctg
tttgcacgcagcaggcctggaggccccagtgtacttaaatataataagaa
ataaatctttttaaaaaattgaaggattcaaacaacctagccacagcgtg
ggagcttgagagtcagagggcccttttcggatccccaagtcagcttctgg
aggcccttcttcgggccttttagagcataaaagtgagtaaaggcgtgaac
atttgaagtaacttctcccaaagaaacagtttaaagcgggaatgtaagtt
atctgacctggactttaccccatgctacttccttgaaggtaccatgaatc
agcagttttactgtggtaaaacaacaaactaaccaaacaaccaaaacagt
tttaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_7191518_7192442
seq2: B6Ng01-291K09.b_46_969 (reverse)

seq1  ATTTCCCACCCCCACCGTCTACCCCTGCTACCAAGGCTCAGGGATTAGTA  50
      |||||||| ||||||||||| ||| |||||||| || |||||||||||| 
seq2  ATTTCCCA-CCCCACCGTCT-CCCATGCTACCATGG-TCAGGGATTAGT-  46

seq1  AAGAAGCGGAGACGGGCAGACTGTAAGAGCAGAGGTAGGAGTGCTGTAGC  100
      ||||||| ||||| |||||||||| |||||||||||| ||||||| ||||
seq2  AAGAAGCCGAGAC-GGCAGACTGT-AGAGCAGAGGTACGAGTGCTTTAGC  94

seq1  ATTCTGTCTTCTGGATGCC-ATGCAGCTATGGCAAAGGTGAACTCGTAGC  149
      ||||||||||||||||||| || ||||||||||| |||||||||||| ||
seq2  ATTCTGTCTTCTGGATGCCAATACAGCTATGGCAGAGGTGAACTCGTTGC  144

seq1  AGCTGCAGTTACCAGCCCAAGACTGAGCCAGGCAAAGTCCTGG-CGAAGA  198
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGCTGCAGTTACCAGCCCAAGACTGAGCCAGGCAAAGTCCTGGACGAAGA  194

seq1  GATGGAGGTTGAAACCTAGGTCCCGAGCCTCATC-AAGGAGCTATTGGCA  247
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GATGGAGGTTGAAACCTAGGTCCCGAGCCTCATCAAAGGAGCTATTGGCA  244

seq1  GTTGGGAGTGGCTGGAGGAGGGAG-AACAGAG-TTCCTACACTCTTTGTA  295
      |||||||||||||||||||||||| ||||||| |||||||||||||||||
seq2  GTTGGGAGTGGCTGGAGGAGGGAGAAACAGAGTTTCCTACACTCTTTGTA  294

seq1  GGATGTGGGCACTGGGAGGATTCCTGTGCTATAGTGGACGGTCTCCTATC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGGGCACTGGGAGGATTCCTGTGCTATAGTGGACGGTCTCCTATC  344

seq1  TACAAACACTAACCCGATATAGTGGGTTATTAAAAAAAAACACAAAGTTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACACTAACCCGATATAGTGGGTTATTAAAAAAAAACACAAAGTTG  394

seq1  GGAAGGAAATGTGCCCAACATATGCTTCTCTGTGAAAGGTGGGAATGGGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAAATGTGCCCAACATATGCTTCTCTGTGAAAGGTGGGAATGGGT  444

seq1  TATTGTAGCCCCCACAGGAAGCAAGGTCATTTTCCATTAAACAGAAGCTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTAGCCCCCACAGGAAGCAAGGTCATTTTCCATTAAACAGAAGCTA  494

seq1  GGAATTAATACCTGTTTGATAAGTATTTGGTGAAAGGAAGGAAGGAAGAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTAATACCTGTTTGATAAGTATTTGGTGAAAGGAAGGAAGGAAGAG  544

seq1  AGGAGGGGAGGAGAGAGAGGAGGAAAGAGGGTGGAAGGAGAGGGAGGAAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGGAGGAGAGAGAGGAGGAAAGAGGGTGGAAGGAGAGGGAGGAAG  594

seq1  TGAGGGGAGGAGGGAGAGAGAGAAGGAAGGAGGGAGAGGGAAGGGGGAGG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGAGGAGGGAGAGAGAGAAGGAAGGAGGGAGAGGGAAGGGGGAGG  644

seq1  GAGGGAGAGGGAGGAAAGGAGGGAGAGGGAAGGGGGAAAAGGAAGAGAGG  695
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGAGTGAGGAAAGGAGGGAGAGGGAAGGGGGAAAAGGAAGAGAGG  694

seq1  GAAGAAGGGAGAGAGAGGGGGAGAGAGGGGGAGGGGGGGAGATCATCTGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGGGAGAGAGAGGGGGAGAGAGGGGGAGGGGGGGAGATCATCTGG  744

seq1  CATAGTTCAGAAGCAGCACAGGCTTTCACAGAACACTAGCAAAGAGAAAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTTCAGAAGCAGCACAGGCTTTCACAGAACACTAGCAAAGAGAAAA  794

seq1  CAGGAAGAGGATGGCGGTTGGCCATTTAGTGGTCACAGTGGTGGCTGTGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGAGGATGGCGGTTGGCCATTTAGTGGTCACAGTGGTGGCTGTGG  844

seq1  TTTGGAGGGGAGGAAGTTGTACAAGGCCTTGGCCCTCACCTGAGAACTCC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGGGGAGGAAGTTGTACAAGGCCTTGGCCCTCACCTGAGAACTCC  894

seq1  CGTCCCAGAACCACAGTCGAAGCGGAATTC  925
      ||||||||||||||||||||||||||||||
seq2  CGTCCCAGAACCACAGTCGAAGCGGAATTC  924

seq1: chr15_7084301_7085299
seq2: B6Ng01-291K09.g_66_1072

seq1  GAATTCCAGTTGTCATACATTGTCTTGAGTAATGCTGCATGTGTTCCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTTGTCATACATTGTCTTGAGTAATGCTGCATGTGTTCCTTC  50

seq1  TAGACACTTGCACTGCCCCTGCTGACGCAGGCTGAAGGTGGTGCTCGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACTTGCACTGCCCCTGCTGACGCAGGCTGAAGGTGGTGCTCGCAA  100

seq1  GCCTTGCCCACTCAGTGTTGGGAGGTGAGGAGGAATTTTTGGCGTATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGCCCACTCAGTGTTGGGAGGTGAGGAGGAATTTTTGGCGTATGTT  150

seq1  TTTGGTTTCTAATGTACTTTTGCACGGTGGGAAGTTTTTGGCTCTCCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTCTAATGTACTTTTGCACGGTGGGAAGTTTTTGGCTCTCCTTC  200

seq1  ATTCTTTTGGCTTCTAAGGCTGAATAAGTTGGAATTAGCATTCATGTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTTGGCTTCTAAGGCTGAATAAGTTGGAATTAGCATTCATGTCTA  250

seq1  GAATCGAGCATAATCTTGTTATGTGGTGGTATCTTGAAGGGCCACTAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCGAGCATAATCTTGTTATGTGGTGGTATCTTGAAGGGCCACTAGGG  300

seq1  GGCAATATTTCTTTCTGAAGGTCCGTGTGTGTCTGGGTTAAGCCTTCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATATTTCTTTCTGAAGGTCCGTGTGTGTCTGGGTTAAGCCTTCATC  350

seq1  CCCGAAGCACACACTTCTGTAAGAAGTTCTTAGATCCAAGGACAGTTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAAGCACACACTTCTGTAAGAAGTTCTTAGATCCAAGGACAGTTGAC  400

seq1  ACGGTGGTAGCAGGAACATCTGGTGGAAAATAACAAGTGCTGACAGAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTGGTAGCAGGAACATCTGGTGGAAAATAACAAGTGCTGACAGAAGT  450

seq1  ACTTCCCTGCTTCTAACATTAGAAAACGCTAACGGGGCAGATGGGTTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCTGCTTCTAACATTAGAAAACGCTAACGGGGCAGATGGGTTGTA  500

seq1  ATTGTCCTGTGGACAGAACCTTGTGAGTTGGCTGAGCCCTGGTGGTGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCCTGTGGACAGAACCTTGTGAGTTGGCTGAGCCCTGGTGGTGGTA  550

seq1  GGATGAAGGTGAGACCGTGGCCCACACTTACATGCTGTAACCTCTGGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAAGGTGAGACCGTGGCCCACACTTACATGCTGTAACCTCTGGGGC  600

seq1  TGTTTGAGGGCCACTGTGGACATTAGGGCGTGATGACAAGATGCCAGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGAGGGCCACTGTGGACATTAGGGCGTGATGACAAGATGCCAGCTG  650

seq1  TTTGCACGCAGCAGGCCTGGAGGCCCCAGTGTACTTAAATATAATAAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCACGCAGCAGGCCTGGAGGCCCCAGTGTACTTAAATATAATAAGAA  700

seq1  ATAAATCTTTTTAAAAAATTG-AGGATTCAAACAACCTAGCCACAGCGT-  748
      ||||||||||||||||||||| ||||||||||||||||||||||||||| 
seq2  ATAAATCTTTTTAAAAAATTGAAGGATTCAAACAACCTAGCCACAGCGTG  750

seq1  GGAGCTTGAGAGTCAGAGGGCCC-TTTCGGATCCCCAAGTCAGCTTCTGG  797
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GGAGCTTGAGAGTCAGAGGGCCCTTTTCGGATCCCCAAGTCAGCTTCTGG  800

seq1  AGGCCCTTCTTCGGGCC-TTTAGAGCATAAAAGTGAGT-AAGGCGTGAAC  845
      ||||||||||||||||| |||||||||||||||||||| |||||||||||
seq2  AGGCCCTTCTTCGGGCCTTTTAGAGCATAAAAGTGAGTAAAGGCGTGAAC  850

seq1  ATTTG-AGAAACTTCT-CCAAAGAAACAG-TTAAAGCGGGAATGTAAGTT  892
      ||||| || ||||||| |||||||||||| ||||||||||||||||||||
seq2  ATTTGAAGTAACTTCTCCCAAAGAAACAGTTTAAAGCGGGAATGTAAGTT  900

seq1  ATCTGACTGGAACTTTACCCCATGCTTACTCCTTGAAGGTACCATG-ATC  941
      |||||||  | |||||||||||||||   ||||||||||||||||| |||
seq2  ATCTGACCTGGACTTTACCCCATGCTACTTCCTTGAAGGTACCATGAATC  950

seq1  AGCAGTTTTACTGTGGTAAAAACAACAAACAAACAAACAAACAAAAACAG  991
      ||||||||||||||||| |||||||||||| ||| ||  ||| |||||||
seq2  AGCAGTTTTACTGTGGT-AAAACAACAAACTAACCAAACAACCAAAACAG  999

seq1  TTTTAGGG  999
      ||||||||
seq2  TTTTAGGG  1007