BAC Information

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BAC

Clone NameB6Ng01-292I17
Chromosome15 (Build37)
Map Location 15,255,396 - 15,366,355
singlet/doubletdoublet
Overlap geneLOC100040046
Upstream geneLOC674819, LOC100040024, LOC100040033
Downstream geneEG239341, LOC100040087, LOC624183
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292I17.bB6Ng01-292I17.g
ACCGA089157GA089158
length1,1361,082
definitionB6Ng01-292I17.b B6Ng01-292I17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,365,213 - 15,366,355)(15,255,396 - 15,256,465)
sequence
gaattcttattatagatacagtccaagttgtaatacccttaataattata
ttaatttaaggtgtcatatgtgttagatttgcatgtatatttgtgaattt
acagtagtaaatgactgactgatatgccttgtaaaaataaatttccacaa
atcaggctttaacttaatggaaagcttcaaagttttatacatatttaatt
catattattttaaattattaaggttttggagtagtttcaaaatatacttt
catgtaattattctctaaatgaaaatatagttaatgctgtacaatactgt
agtagcttgagaaagaaaaattgttaaattaacacaaagaatttagtatt
gaaactaaatctcccattatatcaaaaagaagattttgcttcatctgctt
tttgaaaatctcaagttatagcattctccaagaactaaaagtggccatga
aaattttctgctagtgtagaaagcctattaataggatgggcagagtattt
caatgcttcattgcttccagcccatagagaacacaaggacacctttaaaa
atggtattgaaacaaaattaccttaagcaaacattcaggtatggagtaag
aggaaacacctattatttcttatgattccttaagacaagggtatacagct
attaatacaaatgtaaatatttcatcaactgaaacatttttaaaacaatt
ttattggcttcagttaaagtaacaattgtatggatgcaaagccagcactt
ataatcaaagagggattgtattagattgtgagcttgctaccttgtaattt
aataatatacattctaccctatattccaggttatagcaactaggaagtag
tccacattttcagaaaatattttgtaatgatattcacaatagtcacttag
ccttaaaaatgtcctgcagatatttttcaatgaaatagacctagtttttc
aagcatcagtttacagtgtgtagtattcaggtttcagtgaatgacttgga
gatgcatatacaaaaatatagtgacatgacactctaatccaacatgtaat
tacacagcattatgaatggcctgtgagtttggaggtgtggatctatagaa
aacactttgaacatgactcaatagacattaccaagt

gaattctttgctgggtgatgtagaggactgagtctaattcgttgctatgt
actgagttttgtgtttgaaactatttaaaaaaataccctccactttttgt
gctttttgttgttgttgttgtttaatcagagacagcaacaaatatgaagc
cagttaaggaacttaaagtacaatttcgatcttgtatctaaagaatttga
ctctgaatctagtcagcatttgttggcttaaaataaacaaagtcatgttg
aaactggccccctttaaatgtgttggttggcaaaggaaaagcatgcataa
agactggaggacagtagaaaagaacctggtatacttgagagagtgaaaac
acaccagagtgacagcagccttcaccagaaccctgaaaacagaagagaaa
aagctcaaaagtagacatgagacagtgcgtcccagaccagggtaatgatt
ttagacacaaggcttaaagcacaggaaattgcctgcagggttttaggttt
tgaagtgactataggatggatccccagtttgagatttttttttagaagga
tgtttgagcctatataaaaaatgaattgatttgtagtaaatttatgtatg
aaatggttatctagggaaataatgcagttaaaaaaatgaaatgtctgtta
ttgtcttaatgaaggagatagccatgattaggaatagagtagagtgaagg
aatattttatatgtcacatagacctttatgaaggttggctaggtgctcca
acatagaaaaatggagcaacagtgactagtacgacaggcaatagttgtgg
tcccacttaccaagtttagtgggattctgtgccatgaattcaaatgacta
gaatattaatataatattctcaatgtcatactggcatttatgtgtaaata
tttactatattatctttttgggttatttctgtgtattgatagaagtttct
atgataaaatataatttcaattcatgagtctattttcactagtcacattt
atttcttgaacactctgaacaacataatatcatgaactttaattttccgt
ttattctattatcatctctttaattttctccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_15365213_15366355
seq2: B6Ng01-292I17.b_46_1181 (reverse)

seq1  ACTTGGTTATGTCTATTGGAGTCATTGGTCAAAGTG-TTTCTATAGAATC  49
      ||||||| ||||||||| |||||| || |||||||| ||||||||| |||
seq2  ACTTGGTAATGTCTATT-GAGTCA-TGTTCAAAGTGTTTTCTATAG-ATC  47

seq1  CACACCTCCAAACTCCACAGGCCATTCATAATGCTGTTGTAAATTACATG  99
      |||||||||||||| ||||||||||||||||||||| ||| |||||||||
seq2  CACACCTCCAAACT-CACAGGCCATTCATAATGCTG-TGT-AATTACATG  94

seq1  TTGGATTTAGAGTGTTCATTGTCACTATATTTTTGTATATGCATCTCCAA  149
      ||||| |||||||| ||| |||||||||||||||||||||||||||||||
seq2  TTGGA-TTAGAGTG-TCA-TGTCACTATATTTTTGTATATGCATCTCCAA  141

seq1  GTCATTCACTGAACCCTGAATACTACACACTGTAAACTGATGCTTGAAAA  199
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTCATTCACTGAAACCTGAATACTACACACTGTAAACTGATGCTTGAAAA  191

seq1  ACTAGGTCTATTTCATTG-AAAATATCTGCAGGACATTTTTAAGGCTAAG  248
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACTAGGTCTATTTCATTGAAAAATATCTGCAGGACATTTTTAAGGCTAAG  241

seq1  TGACTATTGTGAATATCATTACAAAATATTTTCTGAAAATGTGGACTACT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTATTGTGAATATCATTACAAAATATTTTCTGAAAATGTGGACTACT  291

seq1  TCCTAGTTGCTATAACCTGGAATATAGGGTAGAATGTATATTATTAAATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGTTGCTATAACCTGGAATATAGGGTAGAATGTATATTATTAAATT  341

seq1  ACAAGGTAGCAAGCTCACAATCTAATACAATCCCTCTTTGATTATAAGTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGTAGCAAGCTCACAATCTAATACAATCCCTCTTTGATTATAAGTG  391

seq1  CTGGCTTTGCATCCATACAATTGTTACTTTAACTGAAGCCAATAAAATTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTTGCATCCATACAATTGTTACTTTAACTGAAGCCAATAAAATTG  441

seq1  TTTTAAAAATGTTTCAGTTGATGAAATATTTACATTTGTATTAATAGCTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAATGTTTCAGTTGATGAAATATTTACATTTGTATTAATAGCTG  491

seq1  TATACCCTTGTCTTAAGGAATCATAAGAAATAATAGGTGTTTCCTCTTAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCCTTGTCTTAAGGAATCATAAGAAATAATAGGTGTTTCCTCTTAC  541

seq1  TCCATACCTGAATGTTTGCTTAAGGTAATTTTGTTTCAATACCATTTTTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATACCTGAATGTTTGCTTAAGGTAATTTTGTTTCAATACCATTTTTA  591

seq1  AAGGTGTCCTTGTGTTCTCTATGGGCTGGAAGCAATGAAGCATTGAAATA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGTCCTTGTGTTCTCTATGGGCTGGAAGCAATGAAGCATTGAAATA  641

seq1  CTCTGCCCATCCTATTAATAGGCTTTCTACACTAGCAGAAAATTTTCATG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCCATCCTATTAATAGGCTTTCTACACTAGCAGAAAATTTTCATG  691

seq1  GCCACTTTTAGTTCTTGGAGAATGCTATAACTTGAGATTTTCAAAAAGCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTTTTAGTTCTTGGAGAATGCTATAACTTGAGATTTTCAAAAAGCA  741

seq1  GATGAAGCAAAATCTTCTTTTTGATATAATGGGAGATTTAGTTTCAATAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGCAAAATCTTCTTTTTGATATAATGGGAGATTTAGTTTCAATAC  791

seq1  TAAATTCTTTGTGTTAATTTAACAATTTTTCTTTCTCAAGCTACTACAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCTTTGTGTTAATTTAACAATTTTTCTTTCTCAAGCTACTACAGT  841

seq1  ATTGTACAGCATTAACTATATTTTCATTTAGAGAATAATTACATGAAAGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACAGCATTAACTATATTTTCATTTAGAGAATAATTACATGAAAGT  891

seq1  ATATTTTGAAACTACTCCAAAACCTTAATAATTTAAAATAATATGAATTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTGAAACTACTCCAAAACCTTAATAATTTAAAATAATATGAATTA  941

seq1  AATATGTATAAAACTTTGAAGCTTTCCATTAAGTTAAAGCCTGATTTGTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTATAAAACTTTGAAGCTTTCCATTAAGTTAAAGCCTGATTTGTG  991

seq1  GAAATTTATTTTTACAAGGCATATCAGTCAGTCATTTACTACTGTAAATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTATTTTTACAAGGCATATCAGTCAGTCATTTACTACTGTAAATT  1041

seq1  CACAAATATACATGCAAATCTAACACATATGACACCTTAAATTAATATAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATATACATGCAAATCTAACACATATGACACCTTAAATTAATATAA  1091

seq1  TTATTAAGGGTATTACAACTTGGACTGTATCTATAATAAGAATTC  1143
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAGGGTATTACAACTTGGACTGTATCTATAATAAGAATTC  1136


seq1: chr15_15255396_15256465
seq2: B6Ng01-292I17.g_64_1145

seq1  GAATTCTTTGCTGGGTGATGTAGAGGACTGAGTCTAATTCGTTGCTATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCTGGGTGATGTAGAGGACTGAGTCTAATTCGTTGCTATGT  50

seq1  ACTGAGTTTTGTGTTTGAAACTATTTAAAAAAATACCCTCCACTTTTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGTTTTGTGTTTGAAACTATTTAAAAAAATACCCTCCACTTTTTGT  100

seq1  GCTTTTTGTTGTTGTTGTTGTTTAATCAGAGACAGCAACAAATATGAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTGTTGTTGTTGTTGTTTAATCAGAGACAGCAACAAATATGAAGC  150

seq1  CAGTTAAGGAACTTAAAGTACAATTTCGATCTTGTATCTAAAGAATTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAAGGAACTTAAAGTACAATTTCGATCTTGTATCTAAAGAATTTGA  200

seq1  CTCTGAATCTAGTCAGCATTTGTTGGCTTAAAATAAACAAAGTCATGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAATCTAGTCAGCATTTGTTGGCTTAAAATAAACAAAGTCATGTTG  250

seq1  AAACTGGCCCCCTTTAAATGTGTTGGTTGGCAAAGGAAAAGCATGCATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGCCCCCTTTAAATGTGTTGGTTGGCAAAGGAAAAGCATGCATAA  300

seq1  AGACTGGAGGACAGTAGAAAAGAACCTGGTATACTTGAGAGAGTGAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGAGGACAGTAGAAAAGAACCTGGTATACTTGAGAGAGTGAAAAC  350

seq1  ACACCAGAGTGACAGCAGCCTTCACCAGAACCCTGAAAACAGAAGAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAGAGTGACAGCAGCCTTCACCAGAACCCTGAAAACAGAAGAGAAA  400

seq1  AAGCTCAAAAGTAGACATGAGACAGTGCGTCCCAGACCAGGGTAATGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCAAAAGTAGACATGAGACAGTGCGTCCCAGACCAGGGTAATGATT  450

seq1  TTAGACACAAGGCTTAAAGCACAGGAAATTGCCTGCAGGGTTTTAGGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACACAAGGCTTAAAGCACAGGAAATTGCCTGCAGGGTTTTAGGTTT  500

seq1  TGAAGTGACTATAGGATGGATCCCCAGTTTGAGATTTTTTTTTAGAAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGACTATAGGATGGATCCCCAGTTTGAGATTTTTTTTTAGAAGGA  550

seq1  TGTTTGAGCCTATATAAAAAATGAATTGATTTGTAGTAAATTTATGTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGAGCCTATATAAAAAATGAATTGATTTGTAGTAAATTTATGTATG  600

seq1  AAATGGTTATCTAGGGAAATAATGCAGTTAAAAAAATGAAATGTCTGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTTATCTAGGGAAATAATGCAGTTAAAAAAATGAAATGTCTGTTA  650

seq1  TTGTCTTAATGAAGGAGATAGCCATGATTAGGAATAGAGTAGAGTGAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTAATGAAGGAGATAGCCATGATTAGGAATAGAGTAGAGTGAAGG  700

seq1  AATATTTTATATGTCACATAGACCTTTATGAAGGTTGGCTAGGTGCTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTATATGTCACATAGACCTTTATGAAGGTTGGCTAGGTGCTCCA  750

seq1  ACATAGAAAAATGGAGCAACAGTGACTAGTACGACAGGCAATAGTTGTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAAAAATGGAGCAACAGTGACTAGTACGACAGGCAATAGTTGTGG  800

seq1  TCCCACTTACCAAGTTTAGTGGGATTCTGTGCCATGAATTCAAATGACTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTTACCAAGTTTAGTGGGATTCTGTGCCATGAATTCAAATGACTA  850

seq1  GAATATTAATATAATATTCTCAATGTCATACTGGCATTTATGTGTAAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTAATATAATATTCTCAATGTCATACTGGCATTTATGTGTAAATA  900

seq1  TTTACTATATTATCTTTTT-GGTTAATTCTGTGTATTGATAGAAG-TTCT  948
      ||||||||||||||||||| ||||| ||||||||||||||||||| ||||
seq2  TTTACTATATTATCTTTTTGGGTTATTTCTGTGTATTGATAGAAGTTTCT  950

seq1  ATGATAAAATAATAATTCAA-TCATGAGTCTATTTTCACTAGTCACATTT  997
      |||||||||||  | ||||| |||||||||||||||||||||||||||||
seq2  ATGATAAAATATAATTTCAATTCATGAGTCTATTTTCACTAGTCACATTT  1000

seq1  ATTTCTTGACAACTCTGAAC-ACAT-ATATCATGAATTTTA--TTTCCTT  1043
      |||||||||  ||||||||| |||| |||||||||| ||||  ||||| |
seq2  ATTTCTTGAACACTCTGAACAACATAATATCATGAACTTTAATTTTCCGT  1050

seq1  TTA-TCTA-TATCATCTCTT---ATTTCTCCC  1070
      ||| |||| |||||||||||    ||||||||
seq2  TTATTCTATTATCATCTCTTTAATTTTCTCCC  1082


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