BAC Information

Click to search

BAC

Clone NameB6Ng01-292O13
Chromosome15 (Build37)
Map Location 23,230,565 - 23,231,754
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545091, Cdh18
Downstream geneLOC624863, LOC666989
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292O13.bB6Ng01-292O13.g
ACCGA089424GA089425
length1,1821,139
definitionB6Ng01-292O13.b B6Ng01-292O13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtatcccacataaagaacagaagtccaaatgagagattactat
acttgcagagcagaataacaaaactacaaataatgagaaattataatgag
taacaatcatgaattgcaaataatttgtctagatactctgatagactaaa
tataacttaacgaaataaagcaacatatagagcaatgtctaagttatcat
ttatataaatcaaatgtatgaaaaatgaaaggtgaaaaataggtgtgatt
attttgctatatattcaagttaaatcatgcctttggtacagatgtagtgc
tatcaagtaggtcttcaataaattctttaatcagacatttatagccaatc
atcccagtttttaaaaatatgttgctgaagtatttatccaaagagagagg
ggtaaaaattcagagccagggcagtcagctagagaaacaaatgataaata
tttatgggctttctgatctcaagcttttgtgcttttgtttcattaattat
aagtctaattaaaaattttatcaaacagttgaaagagaaaattattaaga
aaatgagtacaagtaactgtaatggtaaaggatatatatatatatatata
tatatatatatatatatatatacacacatacatatacatacacacacaca
tatatatgcatacacacacatatatatatatatacatatatattcaaaat
atatcacttattaacaaattagtgggtttaatttattactgtagggtttt
ttatttgtttgtctttttgttaaaatttgaattttctacttctacattct
tttatcagtgcttcctttttttttatcttctgatgccctcattcaagacc
ttgaaatttggagaagaacccatttgacaagatagattactttgcaactt
taacattgttagataattttgatatgatcacataccaaatataatttcaa
aatgagtatccatttaaacattaaggatgaaactcacgacagacacttgc
ctagcaatgtgagacatcaatgtcagataccatcaccaagcttgtgggac
acaaataagagattgcctgatgcagagcaagaggagtcagtatattagtt
aaaaggagaaaaatgcaagcttccagaaaatatatatatgaagacaatag
cctttccaaaggttgaaagggggaggggataa
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacatacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctagag
cttttagatgtgttgtcaagctgctagtatgtgctctctcccgttttttt
cttgaaggcactcatagctatgagtttccctcttagaatgcttcattgtg
tccaaagttggtacgtgttgcctcattttcataactctaaaaagtcttta
attctttcttatctttcttgaccagtatccatgaagaggtgtgtccagtc
atgagttgccttcgtaatatttggctatgcgagaatcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_23230565_23231754
seq2: B6Ng01-292O13.b_47_1228 (reverse)

seq1  TTATCCCCCCCCCTTTTCAACCTTTGTGAAAAGACTATTTTTTCTTCAT-  49
      |||||||| |||| ||||||||||  || |||| |||  || ||||||| 
seq2  TTATCCCCTCCCCCTTTCAACCTT--TGGAAAGGCTA--TTGTCTTCATA  46

seq1  TATATATTCT-TGGAAGCTTTCTTTTTTCTCCCTTTTAATTATATCCTTG  98
      |||||||| | ||||||||| | ||||||||| ||| | | |||| ||  
seq2  TATATATTTTCTGGAAGCTTGCATTTTTCTCCTTTTAACTAATATACTGA  96

seq1  CTTTCTTCTTTGCTTCCTTCCATCACGCAATTCTCTTTATTTGTTTGTCC  148
      |  || || |||||    | ||||| |||| |||| |||||||  |||||
seq2  C--TCCTC-TTGCT---CTGCATCAGGCAA-TCTC-TTATTTG--TGTCC  136

seq1  AACAAGCTTTGGTGATGGTATCTGACA-TGATGTCTCACA-TGCTAGGCA  196
       |||||| ||||||||||||||||||| |||||||||||| |||||||||
seq2  CACAAGC-TTGGTGATGGTATCTGACATTGATGTCTCACATTGCTAGGCA  185

seq1  AGTGGTCTGTCCTTGAGTTTCATCC-TAATGTTTAAATTGATACTCATTT  245
      ||| |||||| | |||||||||||| |||||||||||| |||||||||||
seq2  AGT-GTCTGT-CGTGAGTTTCATCCTTAATGTTTAAATGGATACTCATTT  233

seq1  TGAAATTATATTTGGTATGTGATCATATCAAAATTATCTAACAATGTT-A  294
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGAAATTATATTTGGTATGTGATCATATCAAAATTATCTAACAATGTTAA  283

seq1  AGTTGCAAAGTAATCTATCTTGTC-AATGGGTTCTTCTCCAAATTTCAAG  343
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGTTGCAAAGTAATCTATCTTGTCAAATGGGTTCTTCTCCAAATTTCAAG  333

seq1  GTCTTGAATGA-GGCATCAGAAGAT-AAAAAAAAGGAAGCACTGATAAAA  391
      ||||||||||| ||||||||||||| ||||||||||||||||||||||||
seq2  GTCTTGAATGAGGGCATCAGAAGATAAAAAAAAAGGAAGCACTGATAAAA  383

seq1  GAATGTAGAAGTAGAAAATTCAAATTTTAACAAAAAGACAAACAAATTAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAATGTAGAAGTAGAAAATTCAAATTTTAACAAAAAGACAAACAAATAAA  433

seq1  AAACCCTACAGTAATAAATTAAACCCACTAATTTGTTAATAAGTGATATA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTACAGTAATAAATTAAACCCACTAATTTGTTAATAAGTGATATA  483

seq1  TTTTGAATATATATGTATATATATATATATGTGTGTGTATGCATATATAT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAATATATATGTATATATATATATATGTGTGTGTATGCATATATAT  533

seq1  GTGTGTGTGTATGTATATGTATGTGTGTATATATATATATATATATATAT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTATGTATATGTATGTGTGTATATATATATATATATATATAT  583

seq1  ATATATATATATATATATCCTTTACCATTACAGTTACTTGTACTCATTTT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATCCTTTACCATTACAGTTACTTGTACTCATTTT  633

seq1  CTTAATAATTTTCTCTTTCAACTGTTTGATAAAATTTTTAATTAGACTTA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATAATTTTCTCTTTCAACTGTTTGATAAAATTTTTAATTAGACTTA  683

seq1  TAATTAATGAAACAAAAGCACAAAAGCTTGAGATCAGAAAGCCCATAAAT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAATGAAACAAAAGCACAAAAGCTTGAGATCAGAAAGCCCATAAAT  733

seq1  ATTTATCATTTGTTTCTCTAGCTGACTGCCCTGGCTCTGAATTTTTACCC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCATTTGTTTCTCTAGCTGACTGCCCTGGCTCTGAATTTTTACCC  783

seq1  CTCTCTCTTTGGATAAATACTTCAGCAACATATTTTTAAAAACTGGGATG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTTTGGATAAATACTTCAGCAACATATTTTTAAAAACTGGGATG  833

seq1  ATTGGCTATAAATGTCTGATTAAAGAATTTATTGAAGACCTACTTGATAG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTATAAATGTCTGATTAAAGAATTTATTGAAGACCTACTTGATAG  883

seq1  CACTACATCTGTACCAAAGGCATGATTTAACTTGAATATATAGCAAAATA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACATCTGTACCAAAGGCATGATTTAACTTGAATATATAGCAAAATA  933

seq1  ATCACACCTATTTTTCACCTTTCATTTTTCATACATTTGATTTATATAAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACCTATTTTTCACCTTTCATTTTTCATACATTTGATTTATATAAA  983

seq1  TGATAACTTAGACATTGCTCTATATGTTGCTTTATTTCGTTAAGTTATAT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAACTTAGACATTGCTCTATATGTTGCTTTATTTCGTTAAGTTATAT  1033

seq1  TTAGTCTATCAGAGTATCTAGACAAATTATTTGCAATTCATGATTGTTAC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTATCAGAGTATCTAGACAAATTATTTGCAATTCATGATTGTTAC  1083

seq1  TCATTATAATTTCTCATTATTTGTAGTTTTGTTATTCTGCTCTGCAAGTA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATAATTTCTCATTATTTGTAGTTTTGTTATTCTGCTCTGCAAGTA  1133

seq1  TAGTAATCTCTCATTTGGACTTCTGTTCTTTATGTGGGATACAGAATTC  1190
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATCTCTCATTTGGACTTCTGTTCTTTATGTGGGATACAGAATTC  1182