BAC Information

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BAC

Clone NameB6Ng01-293A04
Chromosome15 (Build37)
Map Location 28,630,682 - 28,631,548
singlet/doubletsinglet
Overlap geneLOC100040702
Upstream geneTrio, LOC667126, Dnahc5, EG382974, LOC100040675, LOC100040689
Downstream geneLOC667153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293A04.bB6Ng01-293A04.g
ACCGA089499GA089500
length8751,182
definitionB6Ng01-293A04.b B6Ng01-293A04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactccatagttaaggtctgatctacatatgtgtaccatgctctc
tcctcattcacaatgaatgtatgaatgcatgcatgcatgaatgaatcaat
gaacaaataaatgttaatatgtttaccatctcccatcacaatttattgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtaaaaacaactcagcagagact
gaaaaggttgcttagaggttaagaatacaggatgctcttgtagaacacac
aggtttagttccaagcccccatgtggtggatcacaactatctattaactt
cagttcaagggactgaatgccctcttttggactctgaatgcagcaagcac
acatgtaatatgcatgcaaggaaaacatccataaatgtaaaataaaaata
atgaaatattagaaaaacattattttatctgccttagttactattggtaa
aagagacaatttccagaaaggtccgctatactcagctttctctattcatc
actgtacaatatagtcacctaccatctttttgaaataagttaattatatt
taactgagataatatttttatacattttgtcttacaacattatatatata
tatatataaactagatcattataaagccaagtcaatttagcatttccatc
ttattatagcttttggcttccactaaagttgtccttgccctagtgatcaa
cattcaacaaaaatgaaggaaaacctagatcatccttttaatagacacaa
agaaaacaataatgaaagagttccacatggctaattcaagtggtcacatc
aagctaaataacttgctgtctctttattttgttggggttgaaaatattta
taacttactccttacaaatgctatt
gaattcaaaatttaacagaatgcctgaaagcccaagaacaaaaaaagaag
aaatacctgaagaagatgacaagaaataatcaaactcaggcctgaagtaa
gtaaaataaatataaaaatatcaatgcaaataatcaataaaacaaattat
tctttgagaaaattagtaagattgaaatatgtagccaaatgatcttcaat
acagatatagaatatcaaaattaatgaatgtagagatgaaaatagaaaaa
cagacatcaatgaaatctacaaaatcataagtatatactttaaaaatatg
tattaaaccaaattgtaaaccctaaaagagatggtaaagcatcttgatac
atacatactaccaaattaaatgagatcaagcaagaaataaaaaacatact
tagtgaaatagaatcaggtattaaaagtctactaaaccaagtaataataa
taataataataataataataataataatagaataaaacccaaggacagat
attttaatgaagggttctaccagaatttcaaagaaatattattgccaata
ttacttagactattgtgcaaaatagaaacagaaggaacattcccaatttg
ctttctaaggtcatagttaccctgatatctaacccacataaagacttaac
aaagaaaaatgagatatttcagactaattccccttatgaatatagatgta
agaattctcaatgaaatacttacaaactgaaagaacacatcaaaaatatc
ttccacgatgaccaattacacttcttcccagaggtgcaacaatgcttcaa
cacacaaaaaccagtaagtattatcaccatataacccaaactgaaagaaa
gaaaagaaaaaaaaaaaaacacatgatcatcccacgtgtagaaaaggctt
ttgataaaatccaacactacttcatgacaaaaaatactgaagaaacttag
actacaaggacatagctcagcataaaagaagatgatttgcagcaagccac
agcaccttcactaggtgaagagaaacctcaaccatgtacacaaaataaga
taaaatgatatccacttctcttcattctattcaatacagtcgtgagtcta
gccaagaaccattggaaacacttgaagaattccaagcgagttagaaattg
aagacaatgcaatcctttaatttgtgactcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_28630682_28631548
seq2: B6Ng01-293A04.b_48_922

seq1  GAATTCACTCCATAGTTAAGGTCTGATCTACATATGTGTACCATGCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCCATAGTTAAGGTCTGATCTACATATGTGTACCATGCTCTC  50

seq1  TCCTCATTCACAATGAATGTATGAATGCATGCATGCATGAATGAATCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATTCACAATGAATGTATGAATGCATGCATGCATGAATGAATCAAT  100

seq1  GAACAAATAAATGTTAATATGTTTACCATCTCCCATCACAATTTATTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAATAAATGTTAATATGTTTACCATCTCCCATCACAATTTATTGTG  150

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAAACAACTCAGCAGAGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAAACAACTCAGCAGAGACT  200

seq1  GAAAAGGTTGCTTAGAGGTTAAGAATACAGGATGCTCTTGTAGAACACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGTTGCTTAGAGGTTAAGAATACAGGATGCTCTTGTAGAACACAC  250

seq1  AGGTTTAGTTCCAAGCCCCCATGTGGTGGATCACAACTATCTATTAACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTAGTTCCAAGCCCCCATGTGGTGGATCACAACTATCTATTAACTT  300

seq1  CAGTTCAAGGGACTGAATGCCCTCTTTTGGACTCTGAATGCAGCAAGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCAAGGGACTGAATGCCCTCTTTTGGACTCTGAATGCAGCAAGCAC  350

seq1  ACATGTAATATGCATGCAAGGAAAACATCCATAAATGTAAAATAAAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTAATATGCATGCAAGGAAAACATCCATAAATGTAAAATAAAAATA  400

seq1  ATGAAATATTAGAAAAACATTATTTTATCTGCCTTAGTTACTATTGGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATATTAGAAAAACATTATTTTATCTGCCTTAGTTACTATTGGTAA  450

seq1  AAGAGACAATTTCCAGAAAGGTCCGCTATACTCAGCTTTCTCTATTCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACAATTTCCAGAAAGGTCCGCTATACTCAGCTTTCTCTATTCATC  500

seq1  ACTGTACAATATAGTCACCTACCATCTTTTTGAAATAAGTTAATTATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTACAATATAGTCACCTACCATCTTTTTGAAATAAGTTAATTATATT  550

seq1  TAACTGAGATAATATTTTTATACATTTTGTCTTACAACATTATATATATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGAGATAATATTTTTATACATTTTGTCTTACAACATTATATATATA  600

seq1  TATATATAAACTAGATCATTATAAAGCCAAGTCAA-TTAGCATTTCCATC  649
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TATATATAAACTAGATCATTATAAAGCCAAGTCAATTTAGCATTTCCATC  650

seq1  TTATTATAGC-TTTGGCTTCCACTAAAGTTGTCCTTGCCCTAGTGATCAA  698
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTATTATAGCTTTTGGCTTCCACTAAAGTTGTCCTTGCCCTAGTGATCAA  700

seq1  CA-TCAACAAAAATGAAGGAAAACCTAGATCATCCTTTTAATAGACACAA  747
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAACAAAAATGAAGGAAAACCTAGATCATCCTTTTAATAGACACAA  750

seq1  AG-AAACAATAATGAAAGAGTTCCACATGGCTAATTCAAGTGGTCACATC  796
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACAATAATGAAAGAGTTCCACATGGCTAATTCAAGTGGTCACATC  800

seq1  AAGCTAAATAACTTGCTGTCTCATTATTTTGTT-GGGTTGAAAATATTTA  845
      |||||||||||||||||||||| |||||||||| ||||||||||||||||
seq2  AAGCTAAATAACTTGCTGTCTCTTTATTTTGTTGGGGTTGAAAATATTTA  850

seq1  T-ACTTACT-CTTAC-AATGCTATT  867
      | ||||||| ||||| |||||||||
seq2  TAACTTACTCCTTACAAATGCTATT  875