BAC Information

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BAC

Clone NameB6Ng01-294A06
Chromosome15 (Build37)
Map Location 62,243,339 - 62,364,512
singlet/doubletdoublet
Overlap genenone
Upstream geneMyc, Pvt1, LOC100040584, H2afy3
Downstream geneLOC100040430, Tsg101-ps, EG239502
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294A06.bB6Ng01-294A06.g
ACCGA090255GA090256
length1,038819
definitionB6Ng01-294A06.b B6Ng01-294A06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,363,473 - 62,364,512)(62,243,339 - 62,244,145)
sequence
gaattcaatatattacttgaataacactgtgaactgagtacaagcagctg
ccatgaatcagtgaagaacatgagcggaagaaaaggaaaagtcaaatgat
ttccccatgagcaaatgtgtagcaagccatagcaggttctattgtctcca
cactagaactgtctcctgctctgggtttagaatataaagtaaggttcttg
ggtattcaataaaacaagaaagaacaaattactagatactggagaggaag
aaaaaaaaaattctgggcagtgacataaacaggcatgagacgcaaactga
cactgtttgagtttgtttcaaagaaaccaaactgctaacaaaaactatag
actggggctggaggcaggatttgttgccttcggtactatgaagtgattct
taaaaagttggccactcactgctctaggaagcagaagtcttggatcccaa
agtctttctgggtaatctaacccttgaaagacctaagatctattatatac
agcaatagataaggtgatgttgttttatgaaaagacaaggcaaaaacaaa
acagaaagactctcggacaagctgatctgcttaggtgaagctcagatgga
ctgaacagcctggaggaagcagagaccagctaagaagcccagaaggaaca
tgaaatcaatcagacagccaagaagaaacaaatacaaggagcctgaagaa
agcagacacctacctgtaaagggctcagaccaactcaaaaaggacaactg
caacctgctgaactgcttgcaggttgcacattatgctctgggtttccagc
actggagaactatcacccatgctgagataggatttaatgatgcaactgta
tttgagtcatttcttttcctgtaggtaaccctccacacatattcctataa
taaacttcaatacaactcattggtcctctaagttagacttcggtggtatc
cattgttggtctttccttgcttccctatctaaggtgagtaatgttcgttt
gtctctcaggaacagtgccaccacacactgccagctgt

gaattctcatttgagcagaaaaacaaattcaagttgcttccagcacaatt
ttattcataacaattctaattcactgttatatgcacagtgctcaccccaa
tcaggtctaagttgcattttgcctcaagagtttgcttattataatatcaa
aagcatctgctttaatctcagggctcagtatttatttttctaaaataaaa
gacaagactgattatatagcagatctattcaactctttttgtattttttt
tttaatattgtggcagtctctaactatgcagctcagactgaccttttatt
ttgaatatttccatcttagtctcatgagtgtttgaatgacaggcaggtac
caccaggctctgattatttctaccctaaggaaaaaaaaatgagctttggc
attgtaaatttcccaaggaaaatctattttatgccaatgtcttaaggact
ctaaggagaaaaaaccaaaaaacaaaaaacctgtgtccttaggtataaag
aggtgtaattttcctttaaacttgtgttattggaagtatagatgtagaaa
ggctaggtagaggcaccaaataggtgttttttaagaccacaaagtgacat
aaatcaatatgtatcaatattcttcttaagctgtaatatatataaaacaa
agaggtgagatgtcactagattttactagattataaatatacatatgtat
atttatacagatttatacagatataaatatacatatgtatatttataaat
ctagttatatatatatatatatgtgtatatatatatatatatatatatat
atatatatatatatatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_62363473_62364512
seq2: B6Ng01-294A06.b_47_1084 (reverse)

seq1  ACAGCTGGCAGTGTTGTGTGGCACTGTTCCTGAGGAGACAAACGAACATT  50
      ||||||||||||||   |||||||||||||||| ||||||||||||||||
seq2  ACAGCTGGCAGTGTGTGGTGGCACTGTTCCTGA-GAGACAAACGAACATT  49

seq1  ACTCACCTTAGATAGGGAAGCAAGGAAAGACCAAACAATGGATACCACCG  100
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACTCACCTTAGATAGGGAAGCAAGGAAAGACC-AACAATGGATACCACCG  98

seq1  AAGTCTAACTTAGAGGACCAATGAGTTGTATTGAAGTTTATTATAGGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTAACTTAGAGGACCAATGAGTTGTATTGAAGTTTATTATAGGAAT  148

seq1  ATGTGTGGAGGGTTACCTACAGGAAAAGAAATGACTCAAATACAGTTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGGAGGGTTACCTACAGGAAAAGAAATGACTCAAATACAGTTGCA  198

seq1  TCATTAAATCCTATCTCAGCATGGGTGATAGTTCTCCAGTGCTGGAAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAAATCCTATCTCAGCATGGGTGATAGTTCTCCAGTGCTGGAAACC  248

seq1  CAGAGCATAATGTGCAACCTGCAAGCAGTTCAGCAGGTTGCAGTTGTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCATAATGTGCAACCTGCAAGCAGTTCAGCAGGTTGCAGTTGTCCT  298

seq1  TTTTGAGTTGGTCTGAGCCCTTTACAGGTAGGTGTCTGCTTTCTTCAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGTTGGTCTGAGCCCTTTACAGGTAGGTGTCTGCTTTCTTCAGGC  348

seq1  TCCTTGTATTTGTTTCTTCTTGGCTGTCTGATTGATTTCATGTTCCTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTATTTGTTTCTTCTTGGCTGTCTGATTGATTTCATGTTCCTTCT  398

seq1  GGGCTTCTTAGCTGGTCTCTGCTTCCTCCAGGCTGTTCAGTCCATCTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTCTTAGCTGGTCTCTGCTTCCTCCAGGCTGTTCAGTCCATCTGAG  448

seq1  CTTCACCTAAGCAGATCAGCTTGTCCGAGAGTCTTTCTGTTTTGTTTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACCTAAGCAGATCAGCTTGTCCGAGAGTCTTTCTGTTTTGTTTTTG  498

seq1  CCTTGTCTTTTCATAAAACAACATCACCTTATCTATTGCTGTATATAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTCTTTTCATAAAACAACATCACCTTATCTATTGCTGTATATAATA  548

seq1  GATCTTAGGTCTTTCAAGGGTTAGATTACCCAGAAAGACTTTGGGATCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTAGGTCTTTCAAGGGTTAGATTACCCAGAAAGACTTTGGGATCCA  598

seq1  AGACTTCTGCTTCCTAGAGCAGTGAGTGGCCAACTTTTTAAGAATCACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCTGCTTCCTAGAGCAGTGAGTGGCCAACTTTTTAAGAATCACTT  648

seq1  CATAGTACCGAAGGCAACAAATCCTGCCTCCAGCCCCAGTCTATAGTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTACCGAAGGCAACAAATCCTGCCTCCAGCCCCAGTCTATAGTTTT  698

seq1  TGTTAGCAGTTTGGTTTCTTTGAAACAAACTCAAACAGTGTCAGTTTGCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGCAGTTTGGTTTCTTTGAAACAAACTCAAACAGTGTCAGTTTGCG  748

seq1  TCTCATGCCTGTTTATGTCACTGCCCAGAATTTTTTTTTTCTTCCTCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGCCTGTTTATGTCACTGCCCAGAATTTTTTTTTTCTTCCTCTCC  798

seq1  AGTATCTAGTAATTTGTTCTTTCTTGTTTTATTGAATACCCAAGAACCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTAGTAATTTGTTCTTTCTTGTTTTATTGAATACCCAAGAACCTT  848

seq1  ACTTTATATTCTAAACCCAGAGCAGGAGACAGTTCTAGTGTGGAGACAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATATTCTAAACCCAGAGCAGGAGACAGTTCTAGTGTGGAGACAAT  898

seq1  AGAACCTGCTATGGCTTGCTACACATTTGCTCATGGGGAAATCATTTGAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTGCTATGGCTTGCTACACATTTGCTCATGGGGAAATCATTTGAC  948

seq1  TTTTCCTTTTCTTCCGCTCATGTTCTTCACTGATTCATGGCAGCTGCTTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTTTCTTCCGCTCATGTTCTTCACTGATTCATGGCAGCTGCTTG  998

seq1  TACTCAGTTCACAGTGTTATTCAAGTAATATATTGAATTC  1040
      ||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGTTCACAGTGTTATTCAAGTAATATATTGAATTC  1038


seq1: chr15_62243339_62244145
seq2: B6Ng01-294A06.g_66_873

seq1  GAATTCTCATTTGAGCAGAAAAACAAATTCAAGTTGCTTCCAGCACAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTTGAGCAGAAAAACAAATTCAAGTTGCTTCCAGCACAATT  50

seq1  TTATTCATAACAATTCTAATTCACTGTTATATGCACAGTGCTCACCCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCATAACAATTCTAATTCACTGTTATATGCACAGTGCTCACCCCAA  100

seq1  TCAGGTCTAAGTTGCATTTTGCCTCAAGAGTTTGCTTATTATAATATCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCTAAGTTGCATTTTGCCTCAAGAGTTTGCTTATTATAATATCAA  150

seq1  AAGCATCTGCTTTAATCTCAGGGCTCAGTATTTATTTTTCTAAAATAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATCTGCTTTAATCTCAGGGCTCAGTATTTATTTTTCTAAAATAAAA  200

seq1  GACAAGACTGATTATATAGCAGATCTATTCAACTCTTTTTGTATTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGACTGATTATATAGCAGATCTATTCAACTCTTTTTGTATTTTTTT  250

seq1  TTTAATATTGTGGCAGTCTCTAACTATGCAGCTCAGACTGACCTTTTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATATTGTGGCAGTCTCTAACTATGCAGCTCAGACTGACCTTTTATT  300

seq1  TTGAATATTTCCATCTTAGTCTCATGAGTGTTTGAATGACAGGCAGGTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATATTTCCATCTTAGTCTCATGAGTGTTTGAATGACAGGCAGGTAC  350

seq1  CACCAGGCTCTGATTATTTCTACCCTAAGGAAAAAAAAATGAGCTTTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGCTCTGATTATTTCTACCCTAAGGAAAAAAAAATGAGCTTTGGC  400

seq1  ATTGTAAATTTCCCAAGGAAAATCTATTTTATGCCAATGTCTTAAGGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAATTTCCCAAGGAAAATCTATTTTATGCCAATGTCTTAAGGACT  450

seq1  CTAAGGAGAAAAAACCAAAAAACAAAAAACCTGTGTCCTTAGGTATAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGAGAAAAAACCAAAAAACAAAAAACCTGTGTCCTTAGGTATAAAG  500

seq1  AGGTGTAATTTTCCTTTAAACTTGTGTTATTGGAAGTATAGATGTAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTAATTTTCCTTTAAACTTGTGTTATTGGAAGTATAGATGTAGAAA  550

seq1  GGCTAGGTAGAGGCACCAAATAGGTGTTTTTTAAGACCACAAAGTGACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGGTAGAGGCACCAAATAGGTGTTTTTTAAGACCACAAAGTGACAT  600

seq1  AAATCAATATGTATCAATATTCTTCTTAAGCTGTAATATATATAAAACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAATATGTATCAATATTCTTCTTAAGCTGTAATATATATAAAACAA  650

seq1  AGAGGTGAGATGTCACTAGATTTTACTAGATTATAAATATACATATGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGAGATGTCACTAGATTTTACTAGATTATAAATATACATATGTAT  700

seq1  ATTTATACAGATTTATACAGATATAAATATACATATGTATATTTAT-AAT  749
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATTTATACAGATTTATACAGATATAAATATACATATGTATATTTATAAAT  750

seq1  CTAGTTATATATATATATATATGTGTATATATATATATATATATATATAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTATATATATATATATATGTGTATATATATATATATATATATATAT  800

seq1  ATATATAT  807
      ||||||||
seq2  ATATATAT  808


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