BAC Information

Click to search

BAC

Clone NameB6Ng01-294D19
Chromosome15 (Build37)
Map Location 37,835,844 - 38,023,567
singlet/doubletdoublet
Overlap geneLOC667534, Rrm2b, LOC100041478, Edd1
Upstream geneZfp706, LOC670911, LOC667492, LOC100041288, Grhl2, Ncald, LOC667498, 4930447A16Rik, LOC100041313
Downstream geneOdf1, LOC382986, LOC667563, Klf10, Azin1, Siah1-ps2, Atp6v1c1, Baalc, TOB3L, Fzd6, LOC636952, Cthrc1, Slc25a32, Wdsof1, LOC671215
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294D19.bB6Ng01-294D19.g
ACCGA090417GA090418
length887962
definitionB6Ng01-294D19.b B6Ng01-294D19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,835,844 - 37,836,732)(38,022,599 - 38,023,567)
sequence
gaattctgttctggaggagagaggctaagcccacagatctttgtgtccag
gtgtcttgtgagagcggcttcctgagtccctgcagcgaaggagccaccct
ccaagctgagacaccggtggctcaagagcgccaccgtgtggaagccagga
acacagctctaagcaacacaatcccataggtgctggtagcaggtcttccc
acgtgagccccaggaagtcccaggaagcaggttggaaaaacaggtaacca
tatctcccctttttcccccgcttttctccctccctcttttcgcctccagg
ccctagggaaggcaagagaacgcagcaacctctggtacctagctttcctc
cctccccttgctggtacatggggctggcagctctgagcgtaactcatagc
tggaaagatggtgaaactaatcctccctttaggagaactagatagaattg
actcagtaaattctccattagccacataacagtaaattcccactgagtgc
aacagctctgctggccagcaactagcaagggtgttctcacctctgcaagc
ttcccctggcttctcccctgaagcctggcaagtctctgcacactcatctc
tcaccagccccttccaggcgggcaacccttggaggtggctactcagcagt
gtagcgccatcttgcctggggctctctaaggaaattttgtggtctttgat
gtcaatctgcccagaattcgggccttatcactttaaggtgcaatagctcc
tgaaactaacttgaaaaagaagacagtattttgtgcccttcacttattgt
gtgtcgaccctcctaggaaattagatcctgatttttgtctccagcgagtg
accaggtgtttgtgaagaggagggggaggaaggagga
gaattccagatttagtgagagactgtagctcagaaagtaaggtagagggg
cctggagagatggctcaaaaggctcgaaagttaacaatccacgctgctct
cggggatctgatgccctcttctgacctctgggtgcacacacacacacaca
cacacacacacacacacacacacacacacagctaagtagttttgggatgg
cttaccaggtttgtaggatctaaccctagctgctcacgacaatctcctat
ggacagtgttaaaaacacagatcccataaaatgttttaaatataaaaaaa
aaaaaaaaaaaaaaaaaagaaaatagataaaaaaaaaaaaaaaaaaaaaa
aaacacagatcccatccatatcagtggagtcaccagcagggcggggccca
ggaatacctggtactggttcaaggtcttggtggcagctgccaagcctggt
cttgggaatctccaaactcgaaagaagctacagggcaaggacaacacgca
catttctcactgccagcttccagtgccagtataacgccaagcacagggca
cagaaatgagatgttgttacctcatcttgtaagtcattaccatgtcagag
ggcaccttcagctgccaaggcctatctggagagccctcaagagctttgga
gtcctaacctggagaggtggatctatcagggtggcatgacccagccatgc
atcagtggggcagtttaactcccaagcctcagattcttttaaggacgagg
gcatgggattaaatgacccctaggatccgatgggtcctggccattcctaa
atggccaccacttaatgtgtgccttttgccggctgacttataagcacatt
tgttgaggtatctgtaatctctcccatctacctctcacatggggtttgga
gtcctgagagatggggcagaaactctgattgagactacactcaaagcaac
aaccgaaagata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_37835844_37836732
seq2: B6Ng01-294D19.b_47_933

seq1  GAATTCTGTTCTGGAGGAGAGAGGCTAAGCCCACAGATCTTTGTGTCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTCTGGAGGAGAGAGGCTAAGCCCACAGATCTTTGTGTCCAG  50

seq1  GTGTCTTGTGAGAGCGGCTTCCTGAGTCCCTGCAGCGAAGGAGCCACCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTGTGAGAGCGGCTTCCTGAGTCCCTGCAGCGAAGGAGCCACCCT  100

seq1  CCAAGCTGAGACACCGGTGGCTCAAGAGCGCCACCGTGTGGAAGCCAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCTGAGACACCGGTGGCTCAAGAGCGCCACCGTGTGGAAGCCAGGA  150

seq1  ACACAGCTCTAAGCAACACAATCCCATAGGTGCTGGTAGCAGGTCTTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCTCTAAGCAACACAATCCCATAGGTGCTGGTAGCAGGTCTTCCC  200

seq1  ACGTGAGCCCCAGGAAGTCCCAGGAAGCAGGTTGGAAAAACAGGTAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGAGCCCCAGGAAGTCCCAGGAAGCAGGTTGGAAAAACAGGTAACCA  250

seq1  TATCTCCCCTTTTTCCCCCGCTTTTCTCCCTCCCTCTTTTCGCCTCCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCCCCTTTTTCCCCCGCTTTTCTCCCTCCCTCTTTTCGCCTCCAGG  300

seq1  CCCTAGGGAAGGCAAGAGAACGCAGCAACCTCTGGTACCTAGCTTTCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGGGAAGGCAAGAGAACGCAGCAACCTCTGGTACCTAGCTTTCCTC  350

seq1  CCTCCCCTTGCTGGTACATGGGGCTGGCAGCTCTGAGCGTAACTCATAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCTTGCTGGTACATGGGGCTGGCAGCTCTGAGCGTAACTCATAGC  400

seq1  TGGAAAGATGGTGAAACTAATCCTCCCTTTAGGAGAACTAGATAGAATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGATGGTGAAACTAATCCTCCCTTTAGGAGAACTAGATAGAATTG  450

seq1  ACTCAGTAAATTCTCCATTAGCCACATAACAGTAAATTCCCACTGAGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTAAATTCTCCATTAGCCACATAACAGTAAATTCCCACTGAGTGC  500

seq1  AACAGCTCTGCTGGCCAGCAACTAGCAAGGGTGTTCTCACCTCTGCAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTCTGCTGGCCAGCAACTAGCAAGGGTGTTCTCACCTCTGCAAGC  550

seq1  TTCCCCTGGCTTCTCCCCTGAAGCCTGGCAAGTCTCTGCACACTCATCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTGGCTTCTCCCCTGAAGCCTGGCAAGTCTCTGCACACTCATCTC  600

seq1  TCACCAGCCCCTTCCAGGCGGGCAACCCTTGGAGGTGGCTACTCAGCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAGCCCCTTCCAGGCGGGCAACCCTTGGAGGTGGCTACTCAGCAGT  650

seq1  GTAGCGCCATCTTGCCTGGGGCTCTCTAAGGAAATTTTGTGGTCTTTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCGCCATCTTGCCTGGGGCTCTCTAAGGAAATTTTGTGGTCTTTGAT  700

seq1  GTCAATCTGCCCAGAATTCGGGCCTTATCACTTTAAGGTGCAATAGCTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATCTGCCCAGAATTCGGGCCTTATCACTTTAAGGTGCAATAGCTCC  750

seq1  TGAAACTAACTTGAAAAAGAAGACAGTATTTTGTGCCCTTCACTTATTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTAACTTGAAAAAGAAGACAGTATTTTGTGCCCTTCACTTATTGT  800

seq1  GTGTCGACCCTCCTAGGAAATTAGATCCTGATTTTTGTCTCCAGCGAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCGACCCTCCTAGGAAATTAGATCCTGATTTTTGTCTCCAGCGAGTG  850

seq1  ACCAGGTGTTTGTGAAGAGGAGGGGGAGGAGGAGGAGGA  889
      ||||||||||||||||||||||||||||||  |||||||
seq2  ACCAGGTGTTTGTGAAGAGGAGGGGGAGGA--AGGAGGA  887

seq1: chr15_38022599_38023567
seq2: B6Ng01-294D19.g_68_1029 (reverse)

seq1  TATCTTTTCTGTTTGTTTTGGCTTTGAGTGTAAGTCTTCAATCAGAGTTT  50
      |||||||   | |||||   ||||||||||| |||| |||||||||||||
seq2  TATCTTT--CGGTTGTT---GCTTTGAGTGT-AGTC-TCAATCAGAGTTT  43

seq1  CTGCCCCATCTCTCAGGACTCCAAACCCCATGGTGAGAGGTAGATGGGAG  100
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTGCCCCATCTCTCAGGACTCCAAACCCCAT-GTGAGAGGTAGATGGGAG  92

seq1  AGATTACAGATACCTCAACAAAATGTGCTTATAAGTCAGCCGGCAAAAGG  150
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGATTACAGATACCTCAAC-AAATGTGCTTATAAGTCAGCCGGCAAAAGG  141

seq1  CACACATTAAGTGGTGGCCATTTAGGAATGGCCAGGACCCATCGGATCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATTAAGTGGTGGCCATTTAGGAATGGCCAGGACCCATCGGATCCT  191

seq1  AGGGGTCATTTAATCCCATGCCCTCGTCCTTAAAAGAATCTGAGGCTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTCATTTAATCCCATGCCCTCGTCCTTAAAAGAATCTGAGGCTTGG  241

seq1  GAGTTAAACTG-CCCACTGATGCATGGCTGGGTCATGCCACCCTGATAGA  299
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAAACTGCCCCACTGATGCATGGCTGGGTCATGCCACCCTGATAGA  291

seq1  TCCACCTCTCCAGGTTAGGACTCCAAAGCTCTTGAGGGCTCTCCAGATAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCTCCAGGTTAGGACTCCAAAGCTCTTGAGGGCTCTCCAGATAG  341

seq1  GCCTTGGCAGCTGAAGGTGCCCTCTGACATGGTAATGACTTACAAGATGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGGCAGCTGAAGGTGCCCTCTGACATGGTAATGACTTACAAGATGA  391

seq1  GGTAACAACATCTCATTTCTGTGCCCTGTGCTTGGCGTTATACTGGCACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACAACATCTCATTTCTGTGCCCTGTGCTTGGCGTTATACTGGCACT  441

seq1  GGAAGCTGGCAGTGAGAAATGTGCGTGTTGTCCTTGCCCTGTAGCTTCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCTGGCAGTGAGAAATGTGCGTGTTGTCCTTGCCCTGTAGCTTCTT  491

seq1  TCGAGTCTGGAGATTCCCAAGACCAGGCTTGGCAGCTGCCACCAAGACCT  549
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGTTTGGAGATTCCCAAGACCAGGCTTGGCAGCTGCCACCAAGACCT  541

seq1  TGAACCAGTACCAGGTATTCCTGGGCCCCGCCCTGCTGGTGACTCCACTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCAGTACCAGGTATTCCTGGGCCCCGCCCTGCTGGTGACTCCACTG  591

seq1  ATATGGATGGGATCTGTGTTTTTTTTTTTTTTTTTTTTTTTTTATCTATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGATGGGATCTGTGTTTTTTTTTTTTTTTTTTTTTTTTTATCTATT  641

seq1  TTC-TTTTTTTTTTTTTTTTTTTTTTTTATATTTAAAACATTTTATGGGA  698
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTTTTTTTTTTTTTTTTTTTATATTTAAAACATTTTATGGGA  691

seq1  TCTGTGTTTTTAACACTGTCCATAGGAGATTGTCGTGAGCAGCTAGGGTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTTTTTAACACTGTCCATAGGAGATTGTCGTGAGCAGCTAGGGTT  741

seq1  AGATCCTACAAACCTGGTAAGCCATCCCAAAACTACTTAGCTGTGTGTGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTACAAACCTGGTAAGCCATCCCAAAACTACTTAGCTGTGTGTGT  791

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACCCAGAGGTCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACCCAGAGGTCA  841

seq1  GAAGAGGGCATCAGATCCCCGAGAGCAGCGTGGATTGTTAACTTTCGAGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGGCATCAGATCCCCGAGAGCAGCGTGGATTGTTAACTTTCGAGC  891

seq1  CTTTTGAGCCATCTCTCCAGGCCCCTCTACCTTACTTTCTGAGCTACAGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGAGCCATCTCTCCAGGCCCCTCTACCTTACTTTCTGAGCTACAGT  941

seq1  CTCTCACTAAATCTGGAATTC  969
      |||||||||||||||||||||
seq2  CTCTCACTAAATCTGGAATTC  962