BAC Information

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BAC

Clone NameB6Ng01-296F24
Chromosome15 (Build37)
Map Location 73,483,957 - 73,635,678
singlet/doubletdoublet
Overlap geneGpr20, LOC100040946, pPtp4a3, Gm628
Upstream gene1810044A24Rik, LOC665621, Peg13, LOC100041120, Chrac1, Eif2c2, Ptk2, LOC666053, LOC100040929, Dennd3, Slc45a4
Downstream geneLOC100041273, EG625276, LOC100040966, EG666113, LOC100041307, LOC100040984, Bai1, 1700016M24Rik, Arc, Jrk, 4933427E11Rik, Psca, 4930572J05Rik, Slurp1, Lypd2, 2300005B03Rik, Lynx1, Ly6d, D730001G18Rik, Ly6k
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296F24.bB6Ng01-296F24.g
ACCGA092002GA092003
length475848
definitionB6Ng01-296F24.b B6Ng01-296F24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,635,198 - 73,635,678)(73,483,957 - 73,484,804)
sequence
caggacatccagggctctgttatacagagaaaccctgtctcaaagaaaaa
aatctcaacctcatgttaaattcctaattttctttttctgacttggcctc
ccatattggtggttcttcatatccaacgttctctgtttgacacactgagt
gcttcatttccagcatttctgtgcaactgttgttctgttggtcgttctca
gatattcagttttcttatggaactcctcggtgttgctggctctcctgccc
aggttctgtggtgtctttctactttttctttcaattttattttatgtata
tgagtacagtgtagcaatttttaggacttctgctctctctggttggcccc
actcgttcagtccctggtccctttgctccagcccaaagatttatttatta
ttatacataagtacactgtagctgtcttcagaagcaccagaagagggagt
cagatcccattacgggtggttttga
gaattccttccactgcctctgcatgccagacgagtccttccctaagccgt
cttctccatctgtgaagtgagaagaaaatgtccccatagctccagctctg
cagtgaggacaccaggaaaggatgatgaaggacggtcccattgaggccca
gggaagttcaggacagcatcagcatcagacggtccctcagataaagcaga
cttgatagtgagtgtctgtgggtccatgaaagtttgaggctagcttgggc
tacatcgtgaaaaatgtgataaaaaaaaacaattgacagcaacaaaaaga
tgttcattgtgctgtttaattataatcctaggggaggtggaagcaggaga
attaaggactcaggtgtcagccagatagtcaggaggcaaaggcaggcaga
tgtctagttctagaacagccggggctacacagagaatatctgtctcaaaa
aaaaaaacaaccgatcaaccaaccaaccaaccaaccaaacaaccaaccaa
acaaccaaacaaccaaccaaccaacagcttaggccctgtgtgatcaaagc
caccttacaagccaggcatggtgagccagcggcacaggtccatcatccca
gcactcagaggcaggagcaggatcatgagttcaagggtaggataccatct
ccaaccacaaacaagctgccttaagcacatagcaatccagtgctgttggt
gcccctctgtagaagaggaaacaggaaccgaatatcagcctggggtcaga
cagtgggtaagtggccgagcaaggatctgaacccaggaaggctgtctagc
ttttgcaagcagcttccaggcctatagggaaaggggtgggggtgggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_73635198_73635678
seq2: B6Ng01-296F24.b_50_530 (reverse)

seq1  TCAAAACCACCCGTAATGGGATCTGACTCCCTCTTCTGGTGCTTCTGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACCACCCGTAATGGGATCTGACTCCCTCTTCTGGTGCTTCTGAAG  50

seq1  ACAGCTACAGTGTACTTATGTATAATAATAAATAAATCTTTGGGCTGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTACAGTGTACTTATGTATAATAATAAATAAATCTTTGGGCTGGAG  100

seq1  CAAAGGGACCAGGGACTGAACGAGTGGGGCCAACCAGAGAGAGCAGAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGACCAGGGACTGAACGAGTGGGGCCAACCAGAGAGAGCAGAAGT  150

seq1  CCTAAAAATTGCTACACTGTACTCATATACATAAAATAAAATTGAAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAAATTGCTACACTGTACTCATATACATAAAATAAAATTGAAAGAA  200

seq1  AAAGTAGAAAGACACCACAGAACCTGGGCAGGAGAGCCAGCAACACCGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGAAAGACACCACAGAACCTGGGCAGGAGAGCCAGCAACACCGAG  250

seq1  GAGTTCCATAAGAAAACTGAATATCTGAGAACGACCAACAGAACAACAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCATAAGAAAACTGAATATCTGAGAACGACCAACAGAACAACAGT  300

seq1  TGCACAGAAATGCTGGAAATGAAGCACTCAGTGTGTCAAACAGAGAACGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGAAATGCTGGAAATGAAGCACTCAGTGTGTCAAACAGAGAACGT  350

seq1  TGGATATGAAGAACCACCAATATGGGAGGCCAAGTCAGAAAAAGAAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATGAAGAACCACCAATATGGGAGGCCAAGTCAGAAAAAGAAAATT  400

seq1  AGGAATTTAACATGAGGTTGAGATTTTTTTCTTTGAGACAGGGTTTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTTAACATGAGGTTGAGATTTTTTTCTTTGAGACAGGGTTTCTCT  450

seq1  GTATAACAGAGCCCTGGATGTCCTGGAATTC  481
      |||||||||||||||||||||||||||||||
seq2  GTATAACAGAGCCCTGGATGTCCTGGAATTC  481

seq1: chr15_73483957_73484804
seq2: B6Ng01-296F24.g_68_914

seq1  GAATTCCTTCCACTGCCTCTGCATGCCAGACGAGTCCTTCCCTAAGCCGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCCACTGCCTCTGCATGCCAGACGAGTCCTTCCCTAAGCCGT  50

seq1  CTTCTCCATCTGTGAAGTGAGAAGAAAATGTCCCCATAGCTCCAGCTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCATCTGTGAAGTGAGAAGAAAATGTCCCCATAGCTCCAGCTCTG  100

seq1  CAGTGAGGACACCAGGAAAGGATGATGAAGGACGGTCCCATTGAGGCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGGACACCAGGAAAGGATGATGAAGGACGGTCCCATTGAGGCCCA  150

seq1  GGGAAGTTCAGGACAGCATCAGCATCAGACGGTCCCTCAGATAAAGCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGTTCAGGACAGCATCAGCATCAGACGGTCCCTCAGATAAAGCAGA  200

seq1  CTTGATAGTGAGTGTCTGTGGGTCCATGAAAGTTTGAGGCTAGCTTGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATAGTGAGTGTCTGTGGGTCCATGAAAGTTTGAGGCTAGCTTGGGC  250

seq1  TACATCGTGAAAAATGTGATAAAAAAAAACAATTGACAGCAACAAAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCGTGAAAAATGTGATAAAAAAAAACAATTGACAGCAACAAAAAGA  300

seq1  TGTTCATTGTGCTGTTTAATTATAATCCTAGGGGAGGTGGAAGCAGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATTGTGCTGTTTAATTATAATCCTAGGGGAGGTGGAAGCAGGAGA  350

seq1  ATTAAGGACTCAGGTGTCAGCCAGATAGTCAGGAGGCAAAGGCAGGCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGGACTCAGGTGTCAGCCAGATAGTCAGGAGGCAAAGGCAGGCAGA  400

seq1  TGTCTAGTTCTAGAACAGCCGGGGCTACACAGAGAATATCTGTCTCAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAGTTCTAGAACAGCCGGGGCTACACAGAGAATATCTGTCTCAAAA  450

seq1  AAAAAAACAACCGATCAACCAACCAACCAACCAACCAAACAACCAACCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACAACCGATCAACCAACCAACCAACCAACCAAACAACCAACCAA  500

seq1  ACAACCAAACAACCAACCAACCAACAGCTTAGGCCCTGTGTGATCAAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCAAACAACCAACCAACCAACAGCTTAGGCCCTGTGTGATCAAAGC  550

seq1  CACCTTACAAGCCAGGCATGGTGAGCCAGCGGCACAGGTCCATCATCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTACAAGCCAGGCATGGTGAGCCAGCGGCACAGGTCCATCATCCCA  600

seq1  GCACTCAGAGGCAGGAGCAGGATCATGAGTTCAAGGGTAGGATACCATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCAGAGGCAGGAGCAGGATCATGAGTTCAAGGGTAGGATACCATCT  650

seq1  CCAACCACAAACAAGCTGCCTTAAGCACATAGCAATCCAGTGCTGTTGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCACAAACAAGCTGCCTTAAGCACATAGCAATCCAGTGCTGTTGGT  700

seq1  GCCCCTCTGTAGAAGAGGAAACAGGAACCGAATATCAGGCCTGGGGTCAG  750
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GCCCCTCTGTAGAAGAGGAAACAGGAACCGAATATCA-GCCTGGGGTCAG  749

seq1  ACAGTGGGTAAGTGGCCGAGCAAGGATCTGAACCCAGGAAGGCTGTCTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGGTAAGTGGCCGAGCAAGGATCTGAACCCAGGAAGGCTGTCTAG  799

seq1  CTTTTGCAAGCAGCTTCCAGGCCTATAGGGAAAGGGGTGGGGGTGGGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCAAGCAGCTTCCAGGCCTATAGGGAAAGGGGTGGGGGTGGGA  847