BAC Information

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BAC

Clone NameB6Ng01-296G14
Chromosome15 (Build37)
Map Location 55,134,700 - 55,263,519
singlet/doubletdoublet
Overlap geneCol14a1
Upstream geneLOC665280, EG383032, Colec10, Mal2, Nov, LOC665302, LOC100039816, Enpp2, LOC100039911, LOC100039822, Taf2, 2600005O03Rik, Depdc6
Downstream geneMrpl13, Mtbp, Sntb1, LOC665348, LOC100039908, Hba-ps3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296G14.bB6Ng01-296G14.g
ACCGA092030GA092031
length1481,012
definitionB6Ng01-296G14.b B6Ng01-296G14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(55,263,372 - 55,263,519)(55,134,700 - 55,135,701)
sequence
gaattcaccaagcaaattaacaaggagacgtggtatcttggcctttatga
caggaactcagagagaaatgctgcatcaaaccttagctgccatgttagct
ttaaaaaaaaaaaaagatggagagaggaagaggtggaggggaagggga
gaattctcagctaaaagcagccttgtttgaagttcccccatttgcaggaa
aagaaatcacatctggcatatggaggactgctcatggcagagacaggatc
tccagaaagagaggggtaaatgttttgggagacgtgggcaaggctgtttg
ctattcaagacattgaacaaccacgacacagcaggggcaatttcatcaga
acggaggcccaaagttcagcttcagttctgggtcaaaagtcagtcaggtg
gagaggccattccaactggatgttggaggtgcgtcaggtacaaacaagcg
tattgttccttcaggccttagagttagtgtgcaatgagatgaaatcgagc
aaaatgcgctgtgtgtacataatgggattttgtttagctgtaaagggaaa
cgaaataattcccaggaaaacagatagatctggagttcacaaggttaagc
aaaacaagcccaattcagaagaaacggaatatgttttcttgaatataaag
aatgtaagctgggcgtggtggcgcacgcctttaatcccagcacttgtgag
gcagaggcaggcggatttctgagttcgagaccagcctggtccaggacagc
cagggctacactgcctcaaacaaaacaaaacaaaacaaaaaacaaaaaca
aacaaacaaacaaaactctgacccataattgttcgggctggtgagatggc
tcagtgggtaagagcacccgactgctcttccgaaggtccgaagttcaaat
cccagcaaccacatggtggctcacaaccacccataatgagatctgatgcc
ctcttctggtgcgtctgaagacagctacagtgtacttacatataataaat
aaataaataaatcttaaaaaaaaaaaagaaatgtagatttcacatgtcat
gtgtatgcgcgtgttagggcatgaaaatttaaacaagtagggtgaagagg
gaagatgaagtcagaagagactggaaacaggaaggaaggtagtggaagat
tgggggtggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_55263372_55263519
seq2: B6Ng01-296G14.b_43_190 (reverse)

seq1  TCCCCTTCCCCTCCACCTCTTCCTCTCTCCATCTTTTTTTTTTTTTAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTCCCCTCCACCTCTTCCTCTCTCCATCTTTTTTTTTTTTTAAAG  50

seq1  CTAACATGGCAGCTAAGGTTTGATGCAGCATTTCTCTCTGAGTTCCTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATGGCAGCTAAGGTTTGATGCAGCATTTCTCTCTGAGTTCCTGTC  100

seq1  ATAAAGGCCAAGATACCACGTCTCCTTGTTAATTTGCTTGGTGAATTC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGCCAAGATACCACGTCTCCTTGTTAATTTGCTTGGTGAATTC  148

seq1: chr15_55134700_55135701
seq2: B6Ng01-296G14.g_67_1078

seq1  GAATTCTCAGCTAAAAGCAGCCTTGTTTGAAGTTCCCCCATTTGCAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCTAAAAGCAGCCTTGTTTGAAGTTCCCCCATTTGCAGGAA  50

seq1  AAGAAATCACATCTGGCATATGGAGGACTGCTCATGGCAGAGACAGGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATCACATCTGGCATATGGAGGACTGCTCATGGCAGAGACAGGATC  100

seq1  TCCAGAAAGAGAGGGGTAAATGTTTTGGGAGACGTGGGCAAGGCTGTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAAGAGAGGGGTAAATGTTTTGGGAGACGTGGGCAAGGCTGTTTG  150

seq1  CTATTCAAGACATTGAACAACCACGACACAGCAGGGGCAATTTCATCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCAAGACATTGAACAACCACGACACAGCAGGGGCAATTTCATCAGA  200

seq1  ACGGAGGCCCAAAGTTCAGCTTCAGTTCTGGGTCAAAAGTCAGTCAGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAGGCCCAAAGTTCAGCTTCAGTTCTGGGTCAAAAGTCAGTCAGGTG  250

seq1  GAGAGGCCATTCCAACTGGATGTTGGAGGTGCGTCAGGTACAAACAAGCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCCATTCCAACTGGATGTTGGAGGTGCGTCAGGTACAAACAAGCG  300

seq1  TATTGTTCCTTCAGGCCTTAGAGTTAGTGTGCAATGAGATGAAATCGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTCCTTCAGGCCTTAGAGTTAGTGTGCAATGAGATGAAATCGAGC  350

seq1  AAAATGCGCTGTGTGTACATAATGGGATTTTGTTTAGCTGTAAAGGGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCGCTGTGTGTACATAATGGGATTTTGTTTAGCTGTAAAGGGAAA  400

seq1  CGAAATAATTCCCAGGAAAACAGATAGATCTGGAGTTCACAAGGTTAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAATAATTCCCAGGAAAACAGATAGATCTGGAGTTCACAAGGTTAAGC  450

seq1  AAAACAAGCCCAATTCAGAAGAAACGGAATATGTTTTCTTGAATATAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAGCCCAATTCAGAAGAAACGGAATATGTTTTCTTGAATATAAAG  500

seq1  AATGTAAGCTGGGCGTGGTGGCGCACGCCTTTAATCCCAGCACTTGTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAGCTGGGCGTGGTGGCGCACGCCTTTAATCCCAGCACTTGTGAG  550

seq1  GCAGAGGCAGGCGGATTTCTGAGTTCGAGACCAGCCTGGTCCAGGACAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCAGGCGGATTTCTGAGTTCGAGACCAGCCTGGTCCAGGACAGC  600

seq1  CAGGGCTACACTGCCTCAAACAAAACAAAACAAAACAAAAAACAAAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTACACTGCCTCAAACAAAACAAAACAAAACAAAAAACAAAAACA  650

seq1  AACAAACAAACAAAACTCTGACCCATAATTGTTCGGGCTGGTGAGATGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAACAAAACTCTGACCCATAATTGTTCGGGCTGGTGAGATGGC  700

seq1  TCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCGAAGTTCAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCGAAGTTCAAAT  750

seq1  CCCAGCAACCACATGGTGGCTCACAACCACCCATAATGAGATCTGATGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCAACCACATGGTGGCTCACAACCACCCATAATGAGATCTGATGCC  800

seq1  CTCTTCTGGTGCGTCTGAAGACAGCTACAGTGTACTTACATATAATAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTGGTGCGTCTGAAGACAGCTACAGTGTACTTACATATAATAAAT  850

seq1  AAATAAATAAATCTTAAAAAAAAAAAAG-AATGTAGA-TTCACATG-CAT  897
      |||||||||||||||||||||||||||| |||||||| |||||||| |||
seq2  AAATAAATAAATCTTAAAAAAAAAAAAGAAATGTAGATTTCACATGTCAT  900

seq1  GTGTATGCGCGTG-TAGGGCATGAAAATT--AACAAGTAGGGTG-AGAGG  943
      ||||||||||||| |||||||||||||||  ||||||||||||| |||||
seq2  GTGTATGCGCGTGTTAGGGCATGAAAATTTAAACAAGTAGGGTGAAGAGG  950

seq1  GAAGATGAAGTCAGAAGAGACTGGGAAACAGGAGGGA--GTAGTGGAAGA  991
      |||||||||||||||||||||| |||||||||| |||  |||||||||||
seq2  GAAGATGAAGTCAGAAGAGACT-GGAAACAGGAAGGAAGGTAGTGGAAGA  999

seq1  T--GGGGTGGTTT  1002
      |  ||||||||||
seq2  TTGGGGGTGGTTT  1012