BAC Information

Click to search

BAC

Clone NameB6Ng01-297B18
Chromosome15 (Build37)
Map Location 19,250,024 - 19,351,964
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC666839, Cdh10, EG666857
Downstream geneEG666875, LOC621884, LOC100040265
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297B18.bB6Ng01-297B18.g
ACCGA092553GA092554
length1,028522
definitionB6Ng01-297B18.b B6Ng01-297B18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,351,451 - 19,351,964)(19,250,024 - 19,250,551)
sequence
gaattcctcattggtattcttcaatgaaccaaccacgttcacatcttact
gaattgtatgatcttggagactggatctgctaattcaatactggcagtga
tagaaagaaccccgcatctggtattttattgctgatgggcagtcttggat
gggtgggaaactaaagtcttctaatcaagtaagctgaatggataattgtt
gggagccgccctcacattcaccgttacaagatggcgctgacatcctgtgt
tctaagtggtaaacaaataatctgtgcatgtgccaagggtagttctctac
cccatgtgctctgccttccccgtgacgacaactcggccgatgggctgcag
ccaatcagggagtgacacgtcctaggcggaggataattctccttaaaagg
gacggggttttgccattctctctcttgctctcttgcgctctggctcctaa
agatgtaagcaatagagctcttgctctggctcttgctctcttgctctctg
gctcctgaagatgtaagcaataaagctttgccgcagaagattccggtttg
ttgtgttcttcctggccggtcgctagaacgcgtgtaagagataatgtctc
cctaatacacaccagagcccaagctgtgaccaggactataaagaagcagg
ggtgacctgcaaactctaatatgccgaatgtgaccagtaatacatttttg
acagcttagttgcatgggattaaagatccagacattcggggcccaactgg
ttttccataatctggccttcctttggctttgacatatgctttccaagaga
agctctcaactgaagagaggcatttatttgtcttttttaactgactagtg
cttgaggagaccaaagaaattccttaaaagaacacaatttttggcttgct
ttcagcttcaggatttaagccatgatcatcatagcaggcaacaaacaggt
atggcagtagatcagtagcctgatcatcaaggaggtagcagagaaagagg
gtcgtggcttttgacatgctgaagtcca

tttcccactgaggccagacagggcagccatgaagttgagctgcctgtctg
ctacatatgtctcctttgtggcacagattctaagagctcccagggttcca
ggattgttgaccatttattttaaatatttttatggggtcaagagtctgaa
gagtgagaacaattattaaattttaccttaacaattactgtatatttctg
gttgcagatgaaattctgtttgagaactattcttagtgttgttttgtttt
gtcttttttttttaacaggtatatgaaaaattgaaaggacagaattatct
gttgttgaagcaaagtaactgtcaactctttgccaggaagaagcccggac
tcgcggggactctcctggagttgagcaggatgataagtgttggtcaccag
agaagaaccatattgggcagggagtcttattgaagcaggaattcacttta
atgtggcagcactttgcttatatagatagggcaagaaggtggggattggg
gtatgtgcggtgagatgacgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_19351451_19351964
seq2: B6Ng01-297B18.b_49_562 (reverse)

seq1  ACATCTTCAGGAGCCAGAGAGCAAGAGAGCAAGAGCCAGAGCAAGAGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTCAGGAGCCAGAGAGCAAGAGAGCAAGAGCCAGAGCAAGAGCTC  50

seq1  TATTGCTTACATCTTTAGGAGCCAGAGCGCAAGAGAGCAAGAGAGAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTTACATCTTTAGGAGCCAGAGCGCAAGAGAGCAAGAGAGAGAAT  100

seq1  GGCAAAACCCCGTCCCTTTTAAGGAGAATTATCCTCCGCCTAGGACGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAACCCCGTCCCTTTTAAGGAGAATTATCCTCCGCCTAGGACGTGT  150

seq1  CACTCCCTGATTGGCTGCAGCCCATCGGCCGAGTTGTCGTCACGGGGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCTGATTGGCTGCAGCCCATCGGCCGAGTTGTCGTCACGGGGAAG  200

seq1  GCAGAGCACATGGGGTAGAGAACTACCCTTGGCACATGCACAGATTATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCACATGGGGTAGAGAACTACCCTTGGCACATGCACAGATTATTT  250

seq1  GTTTACCACTTAGAACACAGGATGTCAGCGCCATCTTGTAACGGTGAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACCACTTAGAACACAGGATGTCAGCGCCATCTTGTAACGGTGAATG  300

seq1  TGAGGGCGGCTCCCAACAATTATCCATTCAGCTTACTTGATTAGAAGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGCGGCTCCCAACAATTATCCATTCAGCTTACTTGATTAGAAGACT  350

seq1  TTAGTTTCCCACCCATCCAAGACTGCCCATCAGCAATAAAATACCAGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTCCCACCCATCCAAGACTGCCCATCAGCAATAAAATACCAGATG  400

seq1  CGGGGTTCTTTCTATCACTGCCAGTATTGAATTAGCAGATCCAGTCTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGTTCTTTCTATCACTGCCAGTATTGAATTAGCAGATCCAGTCTCCA  450

seq1  AGATCATACAATTCAGTAAGATGTGAACGTGGTTGGTTCATTGAAGAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCATACAATTCAGTAAGATGTGAACGTGGTTGGTTCATTGAAGAATA  500

seq1  CCAATGAGGAATTC  514
      ||||||||||||||
seq2  CCAATGAGGAATTC  514


seq1: chr15_19250024_19250551
seq2: B6Ng01-297B18.g_68_595

seq1  GAATTCTTTCCCACTGAGGCCAGACAGGGCAGCCATGAAGTTGAGCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCCACTGAGGCCAGACAGGGCAGCCATGAAGTTGAGCTGCC  50

seq1  TGTCTGCTACATATGTCTCCTTTGTGGCACAGATTCTAAGAGCTCCCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCTACATATGTCTCCTTTGTGGCACAGATTCTAAGAGCTCCCAGG  100

seq1  GTTCCAGGATTGTTGACCATTTATTTTAAATATTTTTATGGGGTCAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAGGATTGTTGACCATTTATTTTAAATATTTTTATGGGGTCAAGAG  150

seq1  TCTGAAGAGTGAGAACAATTATTAAATTTTACCTTAACAATTACTGTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGAGTGAGAACAATTATTAAATTTTACCTTAACAATTACTGTATA  200

seq1  TTTCTGGTTGCAGATGAAATTCTGTTTGAGAACTATTCTTAGTGTTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGTTGCAGATGAAATTCTGTTTGAGAACTATTCTTAGTGTTGTTT  250

seq1  TGTTTTGTCTTTTTTTTTTAACAGGTATATGAAAAATTGAAAGGACAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTCTTTTTTTTTTAACAGGTATATGAAAAATTGAAAGGACAGAA  300

seq1  TTATCTGTTGTTGAAGCAAAGTAACTGTCAACTCTTTGCCAGGAAGAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGTTGTTGAAGCAAAGTAACTGTCAACTCTTTGCCAGGAAGAAGC  350

seq1  CCGGACTCGCGGGGACTCTCCTGGAGTTGAGCAGGATGATAAGTGTTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGACTCGCGGGGACTCTCCTGGAGTTGAGCAGGATGATAAGTGTTGGT  400

seq1  CACCAGAGAAGAACCATATTGGGCAGGGAGTCTTATTGAAGCAGGAATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGAGAAGAACCATATTGGGCAGGGAGTCTTATTGAAGCAGGAATTC  450

seq1  ACTTTAATGTGGCAGCACTTTGCTTATATAGATAGGGCAAGAAGGTGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAATGTGGCAGCACTTTGCTTATATAGATAGGGCAAGAAGGTGGGG  500

seq1  ATTGGGGTATGTGCGGTGAGATGACGTA  528
      ||||||||||||||||||||||||||||
seq2  ATTGGGGTATGTGCGGTGAGATGACGTA  528


| Home | SequenceCutter | Blast | Download |