BAC Information

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BAC

Clone NameB6Ng01-297I15
Chromosome15 (Build37)
Map Location 93,877,319 - 94,034,307
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043283, Glt8d3, Yaf2, Zcrb1, Pphln1, LOC627623, Prickle1, Zfp42-ps1, LOC100042627, LOC100042631
Downstream geneD630010B17Rik, Adamts20, Pus7l, Irak4, Twf1, Tmem117, LOC100043315
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297I15.bB6Ng01-297I15.g
ACCGA092872GA092873
length2811,195
definitionB6Ng01-297I15.b B6Ng01-297I15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,877,319 - 93,877,599)(94,033,104 - 94,034,307)
sequence
tttctttctcttgggctttgagagtcactggaggaactgcacgttaaaaa
cctgtgggtccagatgcctgtgtgggtttcttctagctcttgttccatct
ccaaatttcaatttccaaagtatttaatctctaaaaggtattcaaaaggt
tctggttttaaaaacattttttttccctcttcctgaggtgagccaaatag
aatagatacttagagatagatggtaggatttaggactgtaatgtaaggat
caaatagagagggggaggggacggggggaga
gaattctatttgctcttctttacaactggaaacaaagacacaaccattaa
attaaacggaatggaatttgctattagaaataaaacttaaaaaaaaaaaa
aaacaaaaaaacaaaaggccctgaatcagtctgtgatgccaggaattcag
cacagaagaaggtaactgtgtgtgtgtttatggtaagaagtgcacacagt
tgcatgcttctgttgaagtggaccttgtaaatctcagcctcatgccttat
ccttaacatctacattctatgcataacttagatatagtgtttactataca
gtgttttatttgcctgtatatttctttgattctcagatttcttgatgaga
gagacagaaccttattggtatttgtatttggtctatggtacaagataggt
actcaaataatagataggtatcttttagtgtgttaatttgctcacaccaa
aacacaagtatgtaatacacattgtatgtaaatgtataggcaggtgcatg
cctgtgtatgtataaacataataccctgacatttctaaataagatatttt
gatatacttagtgatgggggtttctatgaagggcattattctaccagaaa
ttcctgtgagcacctgtttcactttcttaatgagaacagtagccaatggt
ctggaggtgtagaggcaagcaggaacctccccagagaacactaagcagag
tgcctctttgacgggaagctctggtgattctgagtctggagagtggccgc
tctggaatgcatgaggctaccatgaaggaaagcaatgtgtgacttccagg
tttatgaggtcacagcctggcatctgagctaaaagtgttgagggcttaag
atgctcttcggagcacacaagtgggtttgcagttagtgtgcaggggtcct
tcctagccgtggacacgcactgcacacatgcatcacaaacatgcacacac
acacacacacacacacacacacacacacacactacagtgcattacatgca
tgcacaatcacatacacacacacacacgacagtgcattaccccaccacac
acaaacagtgcattaacaaccacacccagtgcattacaacatggcaccac
acacattcacacatggcgctatcttgtcaagtcttccgatagaacagaac
ctgtaaatggatgttggatggcctctcagaatcggtgtgttcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_93877319_93877599
seq2: B6Ng01-297I15.b_54_334

seq1  TTTCTTTCTCTTGGGCTTTGAGAGTCACTGGAGGAACTGCACGTTAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTCTTGGGCTTTGAGAGTCACTGGAGGAACTGCACGTTAAAAA  50

seq1  CCTGTGGGTCCAGATGCCTGTGTGGGTTTCTTCTAGCTCTTGTTCCATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGGTCCAGATGCCTGTGTGGGTTTCTTCTAGCTCTTGTTCCATCT  100

seq1  CCAAATTTCAATTTCCAAAGTATTTAATCTCTAAAAGGTATTCAAAAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTTCAATTTCCAAAGTATTTAATCTCTAAAAGGTATTCAAAAGGT  150

seq1  TCTGGTTTTAAAAACATTTTTTTTCCCTCTTCCTGAGGTGAGCCAAATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTTTAAAAACATTTTTTTTCCCTCTTCCTGAGGTGAGCCAAATAG  200

seq1  AATAGATACTTAGAGATAGATGGTAGGATTTAGGACTGTAATGTAAGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATACTTAGAGATAGATGGTAGGATTTAGGACTGTAATGTAAGGAT  250

seq1  CAAATAGAGAGGGGGAGGGGACGGGGGGAGA  281
      |||||||||||||||||||||||||||||||
seq2  CAAATAGAGAGGGGGAGGGGACGGGGGGAGA  281

seq1: chr15_94033104_94034307
seq2: B6Ng01-297I15.g_69_1263 (reverse)

seq1  CAGGAACACACCGA-TCTGAGAGCCCCCATCCCAACATTCACATTATCAG  49
      |||||||||||||| ||||||||   |||| |||||||   ||||  |||
seq2  CAGGAACACACCGATTCTGAGAG--GCCAT-CCAACAT--CCATTTACAG  45

seq1  GTGCTGTTTCATCTGAAAGACTTGAC-AGATAGCG-CATGTGTGTATGTG  97
      || |||||  ||| | |||||||||| |||||||| |||||||| |||||
seq2  GTTCTGTTCTATC-GGAAGACTTGACAAGATAGCGCCATGTGTGAATGTG  94

seq1  TGTGTGTG-CATGTGTGTAATGCACTTGTGTGTGTGTGTGTAATGCACTT  146
      |||| ||| ||||| |||||||||| || |||||  ||| |||||||| |
seq2  TGTG-GTGCCATGT-TGTAATGCAC-TGGGTGTGGTTGT-TAATGCAC-T  139

seq1  GTTTGTGTGTGTGTGTGTAATGCACTTGTCGTGTGTGTGTGTGTATGTGT  196
      |||||||||||   | ||||||||| ||||||||||||||||||||||| 
seq2  GTTTGTGTGTGGTGGGGTAATGCAC-TGTCGTGTGTGTGTGTGTATGTGA  188

seq1  TTGTGCATGCATGTAATGCACTTGTAGTGTGTGTGTGTGTGTGTGTGTGT  246
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTGTGCATGCATGTAATGCAC-TGTAGTGTGTGTGTGTGTGTGTGTGTGT  237

seq1  GTGTGTGTGTGTGTGCATGTTTGTGATGCATGTGTGCAGTGCGTGTCCAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGCATGTTTGTGATGCATGTGTGCAGTGCGTGTCCAC  287

seq1  GGCTAGGAAGGACCCCTGCACACTAACTGCAAACCCACTTGTGTGCTCCG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGGAAGGACCCCTGCACACTAACTGCAAACCCACTTGTGTGCTCCG  337

seq1  AAGAGCATCTTAAGCCCTCAACACTTTTAGCTCAGATGCCAGGCTGTGAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCATCTTAAGCCCTCAACACTTTTAGCTCAGATGCCAGGCTGTGAC  387

seq1  CTCATAAACCTGGAAGTCACACATTGCTTTCCTTCATGGTAGCCTCATGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAAACCTGGAAGTCACACATTGCTTTCCTTCATGGTAGCCTCATGC  437

seq1  ATTCCAGAGCGGCCACTCTCCAGACTCAGAATCACCAGAGCTTCCCGTCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGAGCGGCCACTCTCCAGACTCAGAATCACCAGAGCTTCCCGTCA  487

seq1  AAGAGGCACTCTGCTTAGTGTTCTCTGGGGAGGTTCCTGCTTGCCTCTAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGCACTCTGCTTAGTGTTCTCTGGGGAGGTTCCTGCTTGCCTCTAC  537

seq1  ACCTCCAGACCATTGGCTACTGTTCTCATTAAGAAAGTGAAACAGGTGCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCAGACCATTGGCTACTGTTCTCATTAAGAAAGTGAAACAGGTGCT  587

seq1  CACAGGAATTTCTGGTAGAATAATGCCCTTCATAGAAACCCCCATCACTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGAATTTCTGGTAGAATAATGCCCTTCATAGAAACCCCCATCACTA  637

seq1  AGTATATCAAAATATCTTATTTAGAAATGTCAGGGTATTATGTTTATACA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATCAAAATATCTTATTTAGAAATGTCAGGGTATTATGTTTATACA  687

seq1  TACACAGGCATGCACCTGCCTATACATTTACATACAATGTGTATTACATA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGGCATGCACCTGCCTATACATTTACATACAATGTGTATTACATA  737

seq1  CTTGTGTTTTGGTGTGAGCAAATTAACACACTAAAAGATACCTATCTATT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTTTTGGTGTGAGCAAATTAACACACTAAAAGATACCTATCTATT  787

seq1  ATTTGAGTACCTATCTTGTACCATAGACCAAATACAAATACCAATAAGGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGTACCTATCTTGTACCATAGACCAAATACAAATACCAATAAGGT  837

seq1  TCTGTCTCTCTCATCAAGAAATCTGAGAATCAAAGAAATATACAGGCAAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCTCTCATCAAGAAATCTGAGAATCAAAGAAATATACAGGCAAA  887

seq1  TAAAACACTGTATAGTAAACACTATATCTAAGTTATGCATAGAATGTAGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACACTGTATAGTAAACACTATATCTAAGTTATGCATAGAATGTAGA  937

seq1  TGTTAAGGATAAGGCATGAGGCTGAGATTTACAAGGTCCACTTCAACAGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGGATAAGGCATGAGGCTGAGATTTACAAGGTCCACTTCAACAGA  987

seq1  AGCATGCAACTGTGTGCACTTCTTACCATAAACACACACACAGTTACCTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGCAACTGTGTGCACTTCTTACCATAAACACACACACAGTTACCTT  1037

seq1  CTTCTGTGCTGAATTCCTGGCATCACAGACTGATTCAGGGCCTTTTGTTT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTGCTGAATTCCTGGCATCACAGACTGATTCAGGGCCTTTTGTTT  1087

seq1  TTTTGTTTTTTTTTTTTTTTAAGTTTTATTTCTAATAGCAAATTCCATTC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTTTTTTTTTTTAAGTTTTATTTCTAATAGCAAATTCCATTC  1137

seq1  CGTTTAATTTAATGGTTGTGTCTTTGTTTCCAGTTGTAAAGAAGAGCAAA  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTAATTTAATGGTTGTGTCTTTGTTTCCAGTTGTAAAGAAGAGCAAA  1187

seq1  TAGAATTC  1204
      ||||||||
seq2  TAGAATTC  1195