BAC Information

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BAC

Clone NameB6Ng01-298F14
Chromosome15 (Build37)4 (Build37)
Map Location 26,036,015 - 26,036,281110,561,850 - 110,562,701
singlet/doubletsingletsinglet
Overlap genenone
Upstream gene9230109A22Rik, 4930445E18Rik, Basp1, EG432939, LOC100040583, Myo10, LOC100040602, Ppia-ps15_175.1, 1810015C04Rik, Zfp622
Downstream geneAK162044, Fbxl7, LOC622531, LOC625311
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298F14.bB6Ng01-298F14.g
ACCGA093480GA093481
length691851
definitionB6Ng01-298F14.b B6Ng01-298F14.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(26,036,015 - 26,036,281)(110,561,850 - 110,562,701)
sequence
gaattcaattcccagaaaccacatggtagctcacaaccatctgtaatggg
atctgatgccctcttttggtgtgtctgaagagaataacattgtattcata
tacataaataaatacatcttaaaaacaaatcctatgaagggttgttgccc
cagtgtataggaatgctaggatagtgaggcaagagtggataggtgggtag
gggagcaccctcatagaagcagggtaaggggggaatgggataagggggct
gcagaggggaaaccgggaaaggggataacatttgaaatgtaaacaaataa
aatatccatttaaaaaaatgttgactaaaaagggacatgataaagtggca
tgggcaaaaagaaagaaaaaaaatgtctgagtatgggttcaggactggta
aaaggcacaaatattcagatccaggaattgcatgaccatccaaagcagga
tgtttgaaaacataaagagaaaagtaaaggcagctatttgaaagcaaact
agataaaatgcaaaagaaaagaaataaaagtatgagaccagaaaaccact
gattgactatcaccccaaattaagcaaaattcctttttaggaaaactgaa
cataaatattttagcttctaatccttttttattagatattttcttcattt
acatttcaaatgctatcctgaaagcccctataccctccccc

gaattcttaggggatatacatgtagtcaaggtttagcagctactgctttt
ataatcagagattgaaaaaaaaaaacaactcaactaaaatacaatgtcat
acattagaattcattattaccaaatgcttagagagcacaaagaaataata
agttagttcttgaacttgaactttagaaataataaatagtcctgagagat
aagggaaggcaccaaaacgtttatctgacctgaagctcaaggagaaggaa
ggacaaacaataggtcttggaacattccttgagaaggaaagagcaggagg
gaagacatgaaaacttgtgtggcaaactctaggtaacctaagacatggga
taggagtcataaaattgtagggcttgataattaagactataaaacaagat
ggaagtcaattatggaggcccttgaaacttacatacttacagcaagagag
ttaacagcgaaacagtctgttctctggagtttaaccatttacacaataga
agattgaggtgtgtgtcttggggggtgggggcagatatttgtgtgagata
aaacaaatggaattcacttttaaaaatttactgtgcaaaattaaaaagat
gtgaagaaataaaagaaaatgagaagcacaataatgaagagccagtactt
tgttatacttgctttcaacttttcttgttgtaaggaaggaacacaagcta
atttgctttctcttgaacttggcaacaaatgacctacaagcctggaaggt
ttaaagcaacaagagatgtgttctctcttgttctggtagccagatgtctg
aaatcaggtatttttagggatgttctaccttgagaccttaaaagcaagta
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_26036015_26036281
seq2: B6Ng01-298F14.b_339_737 (reverse)

seq1  GGGGGAGGGTATAGGGGACTTTCGGGATAGCATTTGAAATGTAAATGAAG  50
      ||||||||||||||||| ||||| ||||||||||||||||||||||||||
seq2  GGGGGAGGGTATAGGGG-CTTTCAGGATAGCATTTGAAATGTAAATGAAG  49

seq1  AAAATATCTAATAAAAATTGTTTAAAAAAT-AAATATTAA---------A  90
      |||||||||||||||||  | ||| ||  | ||||||| |          
seq2  AAAATATCTAATAAAAAAGGATTAGAAGCTAAAATATTTATGTTCAGTTT  99

seq1  AAATAAAAAAGAA-------------------AGAGACA----------T  111
         |||||| |||                   | || ||          |
seq2  TCCTAAAAAGGAATTTTGCTTAATTTGGGGTGATAGTCAATCAGTGGTTT  149

seq1  GCTG------------TATT--TTAGCTT----ATTTGATC-ATAATGAT  142
       |||            ||||  ||  |||    |||| ||| |   || |
seq2  TCTGGTCTCATACTTTTATTTCTTTTCTTTTGCATTTTATCTAGTTTGCT  199

seq1  TCCAGATA-----TAATACGTTTGAGGGAACTATTTAAGA----------  177
      | || |||        ||| |||      |   ||| | |          
seq2  TTCAAATAGCTGCCTTTACTTTTCTCTTTATGTTTTCAAACATCCTGCTT  249

seq1  -GGAGGGGAA--------CAGCATC--AAGCTTAGGATCT------AGTG  210
       ||| ||  |        | | |||  ||  || |   ||      ||| 
seq2  TGGATGGTCATGCAATTCCTGGATCTGAATATTTGTGCCTTTTACCAGTC  299

seq1  CT-------TTCTCAGAGAGTTGAATGGTTGCATTTGG------------  241
      ||       | |||||| | ||   |  || | ||| |            
seq2  CTGAACCCATACTCAGACATTTTTTTTCTTTCTTTTTGCCCATGCCACTT  349

seq1  -----------------------ATTTTTTT-ATTGGATATTTTATTTGT  267
                             |||||||| | ||||||||||||||||
seq2  TATCATGTCCCTTTTTAGTCAACATTTTTTTAAATGGATATTTTATTTGT  399


seq1: chr4_110561850_110562701
seq2: B6Ng01-298F14.g_67_917

seq1  GAATTCTTAGGGGATATACATGTAGTCAAGGTTTAGCAGCTACTGCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGGGGATATACATGTAGTCAAGGTTTAGCAGCTACTGCTTTT  50

seq1  ATAATCAGAGATTGAAAAAAAAAAACAACTCAACTAAAATACAATGTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCAGAGATTGAAAAAAAAAAACAACTCAACTAAAATACAATGTCAT  100

seq1  ACATTAGAATTCATTATTACCAAATGCTTAGAGAGCACAAAGAAATAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAGAATTCATTATTACCAAATGCTTAGAGAGCACAAAGAAATAATA  150

seq1  AGTTAGTTCTTGAACTTGAACTTTAGAAATAATAAATAGTCCTGAGAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTTCTTGAACTTGAACTTTAGAAATAATAAATAGTCCTGAGAGAT  200

seq1  AAGGGAAGGCACCAAAACGTTTATCTGACCTGAAGCTCAAGGAGAAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAGGCACCAAAACGTTTATCTGACCTGAAGCTCAAGGAGAAGGAA  250

seq1  GGACAAACAATAGGTCTTGGAACATTCCTTGAGAAGGAAAGAGCAGGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAACAATAGGTCTTGGAACATTCCTTGAGAAGGAAAGAGCAGGAGG  300

seq1  GAAGACATGAAAACTTGTGTGGCAAACTCTAGGTAACCTAAGACATGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACATGAAAACTTGTGTGGCAAACTCTAGGTAACCTAAGACATGGGA  350

seq1  TAGGAGTCATAAAATTGTAGGGCTTGATAATTAAGACTATAAAACAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGTCATAAAATTGTAGGGCTTGATAATTAAGACTATAAAACAAGAT  400

seq1  GGAAGTCAATTATGGAGGCCCTTGAAACTTACATACTTACAGCAAGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCAATTATGGAGGCCCTTGAAACTTACATACTTACAGCAAGAGAG  450

seq1  TTAACAGCGAAACAGTCTGTTCTCTGGAGTTTAACCATTTACACAATAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGCGAAACAGTCTGTTCTCTGGAGTTTAACCATTTACACAATAGA  500

seq1  AGATTGAGGTGTGTGTCTTGGGGGGTGGGGGCAGATATTTGTGTGAGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGAGGTGTGTGTCTTGGGGGGTGGGGGCAGATATTTGTGTGAGATA  550

seq1  AAACAAATGGAATTCACTTTTAAAAATTTACTGTGCAAAATTAAAAAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATGGAATTCACTTTTAAAAATTTACTGTGCAAAATTAAAAAGAT  600

seq1  GTGAAGAAATAAAAGAAAATGAGAAGCACAATAATGAAGAGCCAGTACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAAATAAAAGAAAATGAGAAGCACAATAATGAAGAGCCAGTACTT  650

seq1  TGTTATACTTGCTTTCAAC-TTTCTTGTTGTAAGGAAGGAACACAAGCTA  699
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGTTATACTTGCTTTCAACTTTTCTTGTTGTAAGGAAGGAACACAAGCTA  700

seq1  ATTTGC-TTCTCTTGAACTTGGCAACAAATGACC-ACAAAGCCGGAAGGT  747
      |||||| ||||||||||||||||||||||||||| ||||  | |||||||
seq2  ATTTGCTTTCTCTTGAACTTGGCAACAAATGACCTACAAGCCTGGAAGGT  750

seq1  TTAAAGCAACAAGAGATGTGTTCTCTCTTGGTTCTGGAAGCCAGATGTCT  797
      ||||||||||||||||||||||||||||| ||||||| ||||||||||||
seq2  TTAAAGCAACAAGAGATGTGTTCTCTCTT-GTTCTGGTAGCCAGATGTCT  799

seq1  GAAATCAAGGCATTTTTAGGGATGTCCTACCTTTGAAGACCTAAAAAGCA  847
      |||||| ||| |||||||||||||| |||||||   |||||| |||||||
seq2  GAAATC-AGGTATTTTTAGGGATGTTCTACCTT--GAGACCTTAAAAGCA  846

seq1  GGTAT  852
       ||||
seq2  AGTAT  851


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