BAC Information

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BAC

Clone NameB6Ng01-299F15
Chromosome15 (Build37)
Map Location 20,516,064 - 20,671,828
singlet/doubletdoublet
Overlap geneAcot10, LOC100040302
Upstream geneLOC621884, LOC100040265
Downstream geneCdh12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299F15.bB6Ng01-299F15.g
ACCGA094215GA094216
length1,1201,123
definitionB6Ng01-299F15.b B6Ng01-299F15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(20,670,706 - 20,671,828)(20,516,064 - 20,517,192)
sequence
gaattctactctttatttttgtaaaatgtgaaaacaatataaccatctat
tgatcatggttattatgaaatatgataagttaaatgccattcatgcccaa
ggccccatttataaaatagaaagcactcagctcagctggataacataaat
attcctcctgtcagtgtgagtgccattatcatagagtgaaccatgtgatc
atatgtccttatgtgttcttgttcagcgctggtatgtttctatataatgt
agtctttcattttaaattttataaagctggagccatatcatgtatggagt
tttgttttattgaattatcattttaaataatttaaaaaattaaatcagta
tttaaaatttttctgtgaatctatattgtgctatgtatatgtgcatgtat
gtatgtgtgcatgtattgctgtatataatagatttaaaaaaaactaaccc
atgtgtcaaagcacagataataatgttagatggccagtcataatgggaga
cttttaacacccacactatggttcatagaacattacaggacggtttgaag
gaaaaaacaaaaacaagggctgaaagaacagaggtatggactgaaatatg
gtgtacaatgagatcatctgatgtgattatctatgaaagtattctacaag
atgttctgggagtatcctgtgttggataaatggaatgacttatgagttcc
tatcccatgtctggatagacatactgatatagttgtctgggagagaaaga
atgaatgcattttctccactagagttgacactgaatagatgaatattagt
ctgtaaagacattctttcttgagctcctgtagctcctggaaattaagaac
ctgatcagaattcattggataaagaagaaaatgaaaatcagagaaacagg
gttagttatggaaaaaggaagggtattagcacaaagtgatatttgattgc
aattcacaactgggaaaggtagagataggtagacctctgagtcttgctgg
taggtgagagagcctaatgtaatgagtacatagcaggttagtgagtacac
caaggattttctcttgagctcaattaggcctgccatctgcacatagaaca
ttgcatcactacacacatac

gaattcatttgtaaacatctataatttatgaaatataatttagttacatt
ttggtattacagaaaagcttgctataataaagtaatttcaattttaatat
aaaattttggaatttttctcattttgatgaatgtgtatgtatataatatg
cttatgggcaagacagacatgctgcaaacatgaatgtgcaaatcagaaag
cagattgtagcatctataatcttctgcccttgtgtagatactgtagattg
aactctggtgtccaacaagttcttatattggctgagttaacttgaagacc
cataatgcactatttttaaagacagagatcatcttacttaaattattacc
cttgttgaaaatgacatgaagtctttgagtctaagaagtgtcagctgcac
cctccttatgccaaatgcagaatgattacctgtgaactcatcaatagaaa
tagaaatcaataacagatcacagaatgtgcataaattcagttctaggaaa
acattcaatacttatttgattttgacaatatacaaagtaataagtattta
tgaagcaaacattgcagaccccaaataaattaaatatttaacctttcttg
atattatttctacaaatgtaaaggaactggaaacttagtgtcacacagcc
cacacatgttttgattacaatttgttttcttttgttattttcttttattc
attttttggtgtctgtgggtacatctattgaaattgttgatttatgtttt
aatatatttggtatgttttacagagaattcagttactttaatgaaacata
tattcatgaaatcatacatgcatacaggcataagtttcaaaattatcagg
tctaaatctcatcaccactaaatgtcttactgtttttattttttgttttt
gtttgttttaatttaaattatcttatttatttacatttcagcctttgcct
ccgccgagtctctccttccctagatcttcatctcattcctcctctccctt
gcctacagaggtgctcgtcagcctagactccccttatctagggcttcttc
cactgagttcagaaccagcttgtatttctgcagaagccttggacagctct
gatgctcagattcgtaggttccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_20670706_20671828
seq2: B6Ng01-299F15.b_46_1165 (reverse)

seq1  GTATGTGTGTATGTGGTTGCATG-TCTATGTGCAGATGCAAGGGCCTATT  49
      ||||||||||| ||| |   ||| ||||||||||||||  ||| |  |||
seq2  GTATGTGTGTA-GTGATGCAATGTTCTATGTGCAGATGGCAGGCCTAATT  49

seq1  GAGCTC-AGAGAAAATTCTTGGGTGTTACTCACTAACTTGCTATGTACTC  98
      |||||| ||||||||| ||| |||| ||||||||||| ||||||||||||
seq2  GAGCTCAAGAGAAAATCCTT-GGTG-TACTCACTAACCTGCTATGTACTC  97

seq1  ATTACATTTAGGCTCTCTCACCTACCAGCAAGACTCAGAGGTCTACCTAT  148
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACA-TTAGGCTCTCTCACCTACCAGCAAGACTCAGAGGTCTACCTAT  146

seq1  CTCTACC-TTCCCAGTTTGTGAATTGCAATCAAATATCACTTTGTGCTAA  197
      ||||||| ||||||| ||||||||||||||||||||||||||||||||||
seq2  CTCTACCTTTCCCAG-TTGTGAATTGCAATCAAATATCACTTTGTGCTAA  195

seq1  TACCCTTCCTTTTTCCATAACTAACCCTGTTTCTCCTGATTTTCATTTTC  247
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TACCCTTCCTTTTTCCATAACTAACCCTGTTTCT-CTGATTTTCATTTTC  244

seq1  TTCTTTATCCAATGAATTCTGATCAGGTTCTTAATTTCCAGGAGCTACAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATCCAATGAATTCTGATCAGGTTCTTAATTTCCAGGAGCTACAG  294

seq1  GAGCTCAAGAAAGAATGTCTTTACAGACTAATATTCATCTATTCAGTGTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCAAGAAAGAATGTCTTTACAGACTAATATTCATCTATTCAGTGTC  344

seq1  AACTCTAGTGGAGAAAATGCATTCATTCTTTCTCTCCCAGACAACTATAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTAGTGGAGAAAATGCATTCATTCTTTCTCTCCCAGACAACTATAT  394

seq1  CAGTATGTCTATCCAGACATGGGATAGGAACTCATAAGTCATTCCATTTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATGTCTATCCAGACATGGGATAGGAACTCATAAGTCATTCCATTTA  444

seq1  TCCAACACAGGATACTCCCAGAACATCTTGTAGAATACTTTCATAGATAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACACAGGATACTCCCAGAACATCTTGTAGAATACTTTCATAGATAA  494

seq1  TCACATCAGATGATCTCATTGTACACCATATTTCAGTCCATACCTCTGTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCAGATGATCTCATTGTACACCATATTTCAGTCCATACCTCTGTT  544

seq1  CTTTCAGCCCTTGTTTTTGTTTTTTCCTTCAAACCGTCCTGTAATGTTCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGCCCTTGTTTTTGTTTTTTCCTTCAAACCGTCCTGTAATGTTCT  594

seq1  ATGAACCATAGTGTGGGTGTTAAAAGTCTCCCATTATGACTGGCCATCTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCATAGTGTGGGTGTTAAAAGTCTCCCATTATGACTGGCCATCTA  644

seq1  ACATTATTATCTGTGCTTTGACACATGGGTTAGTTTTTTTTAAATCTATT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATTATCTGTGCTTTGACACATGGGTTAGTTTTTTTTAAATCTATT  694

seq1  ATATACAGCAATACATGCACACATACATACATGCACATATACATAGCACA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAGCAATACATGCACACATACATACATGCACATATACATAGCACA  744

seq1  ATATAGATTCACAGAAAAATTTTAAATACTGATTTAATTTTTTAAATTAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGATTCACAGAAAAATTTTAAATACTGATTTAATTTTTTAAATTAT  794

seq1  TTAAAATGATAATTCAATAAAACAAAACTCCATACATGATATGGCTCCAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGATAATTCAATAAAACAAAACTCCATACATGATATGGCTCCAG  844

seq1  CTTTATAAAATTTAAAATGAAAGACTACATTATATAGAAACATACCAGCG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATAAAATTTAAAATGAAAGACTACATTATATAGAAACATACCAGCG  894

seq1  CTGAACAAGAACACATAAGGACATATGATCACATGGTTCACTCTATGATA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACAAGAACACATAAGGACATATGATCACATGGTTCACTCTATGATA  944

seq1  ATGGCACTCACACTGACAGGAGGAATATTTATGTTATCCAGCTGAGCTGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCACTCACACTGACAGGAGGAATATTTATGTTATCCAGCTGAGCTGA  994

seq1  GTGCTTTCTATTTTATAAATGGGGCCTTGGGCATGAATGGCATTTAACTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTTCTATTTTATAAATGGGGCCTTGGGCATGAATGGCATTTAACTT  1044

seq1  ATCATATTTCATAATAACCATGATCAATAGATGGTTATATTGTTTTCACA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATTTCATAATAACCATGATCAATAGATGGTTATATTGTTTTCACA  1094

seq1  TTTTACAAAAATAAAGAGTAGAATTC  1123
      ||||||||||||||||||||||||||
seq2  TTTTACAAAAATAAAGAGTAGAATTC  1120


seq1: chr15_20516064_20517192
seq2: B6Ng01-299F15.g_67_1189

seq1  GAATTCATTTGTAAACATCTATAATTTATGAAATATAATTTAGTTACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTGTAAACATCTATAATTTATGAAATATAATTTAGTTACATT  50

seq1  TTGGTATTACAGAAAAGCTTGCTATAATAAAGTAATTTCAATTTTAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTATTACAGAAAAGCTTGCTATAATAAAGTAATTTCAATTTTAATAT  100

seq1  AAAATTTTGGAATTTTTCTCATTTTGATGAATGTGTATGTATATAATATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTGGAATTTTTCTCATTTTGATGAATGTGTATGTATATAATATG  150

seq1  CTTATGGGCAAGACAGACATGCTGCAAACATGAATGTGCAAATCAGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGGGCAAGACAGACATGCTGCAAACATGAATGTGCAAATCAGAAAG  200

seq1  CAGATTGTAGCATCTATAATCTTCTGCCCTTGTGTAGATACTGTAGATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTGTAGCATCTATAATCTTCTGCCCTTGTGTAGATACTGTAGATTG  250

seq1  AACTCTGGTGTCCAACAAGTTCTTATATTGGCTGAGTTAACTTGAAGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGGTGTCCAACAAGTTCTTATATTGGCTGAGTTAACTTGAAGACC  300

seq1  CATAATGCACTATTTTTAAAGACAGAGATCATCTTACTTAAATTATTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATGCACTATTTTTAAAGACAGAGATCATCTTACTTAAATTATTACC  350

seq1  CTTGTTGAAAATGACATGAAGTCTTTGAGTCTAAGAAGTGTCAGCTGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTGAAAATGACATGAAGTCTTTGAGTCTAAGAAGTGTCAGCTGCAC  400

seq1  CCTCCTTATGCCAAATGCAGAATGATTACCTGTGAACTCATCAATAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTATGCCAAATGCAGAATGATTACCTGTGAACTCATCAATAGAAA  450

seq1  TAGAAATCAATAACAGATCACAGAATGTGCATAAATTCAGTTCTAGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATCAATAACAGATCACAGAATGTGCATAAATTCAGTTCTAGGAAA  500

seq1  ACATTCAATACTTATTTGATTTTGACAATATACAAAGTAATAAGTATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCAATACTTATTTGATTTTGACAATATACAAAGTAATAAGTATTTA  550

seq1  TGAAGCAAACATTGCAGACCCCAAATAAATTAAATATTTAACCTTTCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCAAACATTGCAGACCCCAAATAAATTAAATATTTAACCTTTCTTG  600

seq1  ATATTATTTCTACAAATGTAAAGGAACTGGAAACTTAGTGTCACACAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATTTCTACAAATGTAAAGGAACTGGAAACTTAGTGTCACACAGCC  650

seq1  CACACATGTTTTGATTACAATTTGTTTTCTTTTGTTATTTTCTTTTATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATGTTTTGATTACAATTTGTTTTCTTTTGTTATTTTCTTTTATTC  700

seq1  ATTTTTTGGTGTCTGTGGGTACATCTATTGAAATTGTTGATTTATGTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTGGTGTCTGTGGGTACATCTATTGAAATTGTTGATTTATGTTTT  750

seq1  AATATATTTGGTATGTTTTACAGAGAATTCAGTTACTTTAATGAAACATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATTTGGTATGTTTTACAGAGAATTCAGTTACTTTAATGAAACATA  800

seq1  TATTCATGAAATCATACATGCATACAGGCATAAG-TTCAAAATTATCAGG  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TATTCATGAAATCATACATGCATACAGGCATAAGTTTCAAAATTATCAGG  850

seq1  TCTAAATCTCATCACCACTAAATGTCTTACTGTTTTTATTTTTTGTTTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATCTCATCACCACTAAATGTCTTACTGTTTTTATTTTTTGTTTTT  900

seq1  GTTTGTTTTAATTTAAATTATCTTATTTATTTACATTTCAGCCTTTGCCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTTAATTTAAATTATCTTATTTATTTACATTTCAGCCTTTGCCT  950

seq1  CCGCCGAGTCTCTCCTTCCCTAGATCTTCATCTCATTCCTCCTCTCCCTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCGAGTCTCTCCTTCCCTAGATCTTCATCTCATTCCTCCTCTCCCTT  1000

seq1  GCCTACAAGAGGGTGCTCGTCAGCCAAGACTCCCCTTATCTAGGGCCTTC  1049
      |||||| ||| |||||||||||||| ||||||||||||||||||| ||||
seq2  GCCTAC-AGA-GGTGCTCGTCAGCCTAGACTCCCCTTATCTAGGG-CTTC  1047

seq1  TCCCACTGAGGTCAGACAAGGCCTGTATTTCTGCCAGAGGCCTTGGGCCA  1099
      | |||||||| |||||    || |||||||||| |||| ||||| || ||
seq2  TTCCACTGAGTTCAGAACCAGCTTGTATTTCTG-CAGAAGCCTT-GGACA  1095

seq1  GCTCTTGTATGCTCCAGATTCGTA-GTTCCG  1129
      |||||   ||||| |||||||||| ||||||
seq2  GCTCT--GATGCT-CAGATTCGTAGGTTCCG  1123


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