BAC Information

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BAC

Clone NameB6Ng01-299I12
Chromosome15 (Build37)
Map Location 15,360,331 - 15,502,306
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC674819, LOC100040024, LOC100040033, LOC100040046
Downstream geneEG239341, LOC100040087, LOC624183
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299I12.bB6Ng01-299I12.g
ACCGA094345GA094346
length1,1441,114
definitionB6Ng01-299I12.b B6Ng01-299I12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,501,160 - 15,502,306)(15,360,331 - 15,361,465)
sequence
gaattctttgtaaagtatatctcaaaaaattcgaaatattgaaaataaag
aaagaagcatcatagtggacatttcagaattgaaaacattaacagtctga
aataacgatctgttccaggaaactttctctgtcactattttttctacaaa
gcccagatgaactgacaaacaagatgcattgctagaatggaagaaagaaa
agggcactgtcaaagcatcactgcagaggttcccctggactgtttcttag
attctgtgtcctcctgcttgcctggaggaatttcccttaacaatttttct
tcaccttcactattacctccaaatacatttctccatgctggtttgtaaga
ctacaatatttagaatattcatattgtgagaacatgacccttgaagacac
tgtgtctaacctagcggtccctattatgtgcagactatggcataaaggga
tattctctaattaattttggactatatgaacattcatagaacttcttaca
atatgtctttttctggtaaaaaatgtttattctattactcaaaaattatt
ctagattctaagttggagaattctgtaatctttgcttgtattttagataa
aatatcactccatttttgcacacacagaaaacaaatgtctaatgattatt
ttttgtttctctgataattaaaaatgggtacacaaaaatgttggttatga
tttatgcattcacatgagtgttttatttaaccaaatgtttccttccaaat
aattcaatcaggtgaatattccatttcagttttattgataaagaccctga
ggtttacagaagatgaggagacctcagacatttgatcaccatcttactgt
gttgcttgggtagggcatcagggattcatggtaagccccaaagcatcatt
aacccctgaatgttacaaaaccaaatgatttcccttaccacctctattga
atttccctatgcttcctcacagttgtaattacatagattcctagaacaag
catgaaagattcacttttgggttagatgtacaaatcaaaatctaattaat
agttgcataagtttttattcttattatataattttatttatatacagtgg
tataaacctgggggtgtactggaaattcaattggttcccatgat
gaattctaacgtgatgaagctcaaggtagctgtgtgggtcttagccattt
ttatcctctatttttttttcattgtattatactttcaaattttatttttc
atgaaaagaatgagaaaatagatttatgtgtatatatttagaaattggag
agcggacaaatttgacagctcacataaaccactgagactgccttaaatag
ccattaaagtcatatgtctttacaaggcagttagtcattcttgcaaagaa
gagtttccaattttattgaaaacaccagtttcttcctacaaacgtctaca
cttcagaaataatggatttggcagatcatacagatttcatgaaataaatt
ggacacagtcatagtctattttatttataattttgtatagggaatataat
tataaaaaatactacttatagagaaatctaattaaattactattttgcgt
aaaataatatacatatgaagaattagagaataaaatctatatatcaaaat
ggaacagccacaaagaatttccctacagttacgtaaatcaaaatggcaaa
gtacacttcctcaaactttctgaattatttcatcctagctaacacccaga
atgatgaagtttagccccaaaggtattctgtggaaaagctataagccatg
gaaaatggagcttaaattcaaagtgccatctcagagagcataataaaaat
agattttcagtctgctccaaacacaaatagtaatgccataaaatatgaaa
tattgggagtatggtattgccatctttaatttttatggtggagtttttct
cagatcttccctatactagaaaatcatcttatatcctgtgaaagtcacca
actttttccagggaagtctcaaaatagaacacagataaaatgatttttga
agatttgttatcccaaaataatttaaaattagttaccagaatatttaaat
atatccttaaatagtaatatatcacatatatcaacagagatagatacagg
aggatcctgatagtatgctttgtacctgtttttaccatcagattaactga
tttgaagcactgtcatatgggggatcaatgaattcaatcatcatgcatga
tctagtccatatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_15501160_15502306
seq2: B6Ng01-299I12.b_48_1191 (reverse)

seq1  ATCATGGGAACCAA-TGATTTTCCCAGTACACCCCCAGGTTTATACCACT  49
      |||||||||||||| ||| ||| |||||||||||||||||||||||||||
seq2  ATCATGGGAACCAATTGAATTT-CCAGTACACCCCCAGGTTTATACCACT  49

seq1  GTATAATTAAATTAAAATTATATAATAGAATTAAAAACTTATGCAACTAT  99
      |||||  |||| |||||||||||||||  | |||||||||||||||||||
seq2  GTATA--TAAA-TAAAATTATATAATAAGAATAAAAACTTATGCAACTAT  96

seq1  TAATTAGATTTTGATTTGTACATCTAA-CCAAAAGTGAATCTTTCATGCT  148
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TAATTAGATTTTGATTTGTACATCTAACCCAAAAGTGAATCTTTCATGCT  146

seq1  TGTTCTAGGAATCTATGTAATTACAACTGTGAGGAAGCATAGGGAAAATT  198
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGTTCTAGGAATCTATGTAATTACAACTGTGAGGAAGCATAGGG-AAATT  195

seq1  CAATAGAGGTGGTAAGGGAAATCATTTGGTTTTGTAACATTCAGGGGTTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGAGGTGGTAAGGGAAATCATTTGGTTTTGTAACATTCAGGGGTTA  245

seq1  ATGATGCTTTGGGGCTTACCATGAATCCCTGATGCCCTACCCAAGCAACA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGCTTTGGGGCTTACCATGAATCCCTGATGCCCTACCCAAGCAACA  295

seq1  CAGTAAGATGGTGATCAAATGTCTGAGGTCTCCTCATCTTCTGTAAACCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGATGGTGATCAAATGTCTGAGGTCTCCTCATCTTCTGTAAACCT  345

seq1  CAGGGTCTTTATCAATAAAACTGAAATGGAATATTCACCTGATTGAATTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTCTTTATCAATAAAACTGAAATGGAATATTCACCTGATTGAATTA  395

seq1  TTTGGAAGGAAACATTTGGTTAAATAAAACACTCATGTGAATGCATAAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAGGAAACATTTGGTTAAATAAAACACTCATGTGAATGCATAAAT  445

seq1  CATAACCAACATTTTTGTGTACCCATTTTTAATTATCAGAGAAACAAAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACCAACATTTTTGTGTACCCATTTTTAATTATCAGAGAAACAAAAA  495

seq1  ATAATCATTAGACATTTGTTTTCTGTGTGTGCAAAAATGGAGTGATATTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCATTAGACATTTGTTTTCTGTGTGTGCAAAAATGGAGTGATATTT  545

seq1  TATCTAAAATACAAGCAAAGATTACAGAATTCTCCAACTTAGAATCTAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAAAATACAAGCAAAGATTACAGAATTCTCCAACTTAGAATCTAGA  595

seq1  ATAATTTTTGAGTAATAGAATAAACATTTTTTACCAGAAAAAGACATATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTTGAGTAATAGAATAAACATTTTTTACCAGAAAAAGACATATT  645

seq1  GTAAGAAGTTCTATGAATGTTCATATAGTCCAAAATTAATTAGAGAATAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAAGTTCTATGAATGTTCATATAGTCCAAAATTAATTAGAGAATAT  695

seq1  CCCTTTATGCCATAGTCTGCACATAATAGGGACCGCTAGGTTAGACACAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTATGCCATAGTCTGCACATAATAGGGACCGCTAGGTTAGACACAG  745

seq1  TGTCTTCAAGGGTCATGTTCTCACAATATGAATATTCTAAATATTGTAGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCAAGGGTCATGTTCTCACAATATGAATATTCTAAATATTGTAGT  795

seq1  CTTACAAACCAGCATGGAGAAATGTATTTGGAGGTAATAGTGAAGGTGAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAAACCAGCATGGAGAAATGTATTTGGAGGTAATAGTGAAGGTGAA  845

seq1  GAAAAATTGTTAAGGGAAATTCCTCCAGGCAAGCAGGAGGACACAGAATC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTGTTAAGGGAAATTCCTCCAGGCAAGCAGGAGGACACAGAATC  895

seq1  TAAGAAACAGTCCAGGGGAACCTCTGCAGTGATGCTTTGACAGTGCCCTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAACAGTCCAGGGGAACCTCTGCAGTGATGCTTTGACAGTGCCCTT  945

seq1  TTCTTTCTTCCATTCTAGCAATGCATCTTGTTTGTCAGTTCATCTGGGCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTCCATTCTAGCAATGCATCTTGTTTGTCAGTTCATCTGGGCT  995

seq1  TTGTAGAAAAAATAGTGACAGAGAAAGTTTCCTGGAACAGATCGTTATTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGAAAAAATAGTGACAGAGAAAGTTTCCTGGAACAGATCGTTATTT  1045

seq1  CAGACTGTTAATGTTTTCAATTCTGAAATGTCCACTATGATGCTTCTTTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGTTAATGTTTTCAATTCTGAAATGTCCACTATGATGCTTCTTTC  1095

seq1  TTTATTTTCAATATTTCGAATTTTTTGAGATATACTTTACAAAGAATTC  1147
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTCAATATTTCGAATTTTTTGAGATATACTTTACAAAGAATTC  1144

seq1: chr15_15360331_15361465
seq2: B6Ng01-299I12.g_70_1183

seq1  GAATTCTAACGTGATGAAGCTCAAGGTAGCTGTGTGGGTCTTAGCCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACGTGATGAAGCTCAAGGTAGCTGTGTGGGTCTTAGCCATTT  50

seq1  TTATCCTCTATTTTTTTTTCATTGTATTATACTTTCAAATTTTATTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTCTATTTTTTTTTCATTGTATTATACTTTCAAATTTTATTTTTC  100

seq1  ATGAAAAGAATGAGAAAATAGATTTATGTGTATATATTTAGAAATTGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAGAATGAGAAAATAGATTTATGTGTATATATTTAGAAATTGGAG  150

seq1  AGCGGACAAATTTGACAGCTCACATAAACCACTGAGACTGCCTTAAATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGACAAATTTGACAGCTCACATAAACCACTGAGACTGCCTTAAATAG  200

seq1  CCATTAAAGTCATATGTCTTTACAAGGCAGTTAGTCATTCTTGCAAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAAAGTCATATGTCTTTACAAGGCAGTTAGTCATTCTTGCAAAGAA  250

seq1  GAGTTTCCAATTTTATTGAAAACACCAGTTTCTTCCTACAAACGTCTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTCCAATTTTATTGAAAACACCAGTTTCTTCCTACAAACGTCTACA  300

seq1  CTTCAGAAATAATGGATTTGGCAGATCATACAGATTTCATGAAATAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAAATAATGGATTTGGCAGATCATACAGATTTCATGAAATAAATT  350

seq1  GGACACAGTCATAGTCTATTTTATTTATAATTTTGTATAGGGAATATAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACAGTCATAGTCTATTTTATTTATAATTTTGTATAGGGAATATAAT  400

seq1  TATAAAAAATACTACTTATAGAGAAATCTAATTAAATTACTATTTTGCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAAATACTACTTATAGAGAAATCTAATTAAATTACTATTTTGCGT  450

seq1  AAAATAATATACATATGAAGAATTAGAGAATAAAATCTATATATCAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATATACATATGAAGAATTAGAGAATAAAATCTATATATCAAAAT  500

seq1  GGAACAGCCACAAAGAATTTCCCTACAGTTACGTAAATCAAAATGGCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGCCACAAAGAATTTCCCTACAGTTACGTAAATCAAAATGGCAAA  550

seq1  GTACACTTCCTCAAACTTTCTGAATTATTTCATCCTAGCTAACACCCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACTTCCTCAAACTTTCTGAATTATTTCATCCTAGCTAACACCCAGA  600

seq1  ATGATGAAGTTTAGCCCCAAAGGTATTCTGTGGAAAAGCTATAAGCCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGAAGTTTAGCCCCAAAGGTATTCTGTGGAAAAGCTATAAGCCATG  650

seq1  GAAAATGGAGCTTAAATTCAAAGTGCCATCTCAGAGAGCATAATAAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGGAGCTTAAATTCAAAGTGCCATCTCAGAGAGCATAATAAAAAT  700

seq1  AGATTTTCAGTCTGCTCCAAACACAAATAGTAATGCCATAAAATATGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTCAGTCTGCTCCAAACACAAATAGTAATGCCATAAAATATGAAA  750

seq1  TATTGGGAGTATGGTATTGCCATCTTTAATTTTTATGGTGGAGTTTTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGGAGTATGGTATTGCCATCTTTAATTTTTATGGTGGAGTTTTTCT  800

seq1  CAGATCTTCCCTATACTAGAAAATCATCTTATATCCTGTGAAAGTCACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTTCCCTATACTAGAAAATCATCTTATATCCTGTGAAAGTCACCA  850

seq1  ACTTTTTCCAGGGAAGTCTCAAAATAGAACACAGATAAAATGATTTTTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTCCAGGGAAGTCTCAAAATAGAACACAGATAAAATGATTTTTGA  900

seq1  AGATTTGTTAT-CCAAAATAATTTAAAATTAGTTACCAGAAATAATTAAA  949
      ||||||||||| ||||||||||||||||||||||||||| |||| |||||
seq2  AGATTTGTTATCCCAAAATAATTTAAAATTAGTTACCAG-AATATTTAAA  949

seq1  TATATCCTTAAATAAGTAATTATATCACAATATAATCAACAGAGATAGAT  999
      ||||||||||||| ||||| |||||||| |||| ||||||||||||||||
seq2  TATATCCTTAAAT-AGTAA-TATATCAC-ATAT-ATCAACAGAGATAGAT  995

seq1  ACAGGAGGATCCTGATTAGTATGCCTTTTGTTACCTTGTTTTTTACCAAT  1049
      ||||||||||||||| ||||||||  |||| |||||   |||||||| ||
seq2  ACAGGAGGATCCTGA-TAGTATGC--TTTG-TACCT--GTTTTTACC-AT  1038

seq1  CAGATTAACTGAATTTTGAAAGGCACTGTCATAT-GGGGATCAATGATTC  1098
      ||||||||||||  ||||||  |||||||||||| |||||||||||    
seq2  CAGATTAACTGA--TTTGAA--GCACTGTCATATGGGGGATCAATG----  1080

seq1  AAAATTTCAATC-TATTGCATGATCTAGGTTCATATAC  1135
         | ||||||| |  ||||||||||| || |||||||
seq2  ---AATTCAATCATCATGCATGATCTA-GTCCATATAC  1114