BAC Information

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BAC

Clone NameB6Ng01-299L06
Chromosome15 (Build37)
Map Location 82,134,836 - 82,135,480
singlet/doubletsinglet
Overlap geneWbp2nl
Upstream geneSlc25a17, St13, Xpnpep3, Dnajb7, Rbx1, EG383080, Ep300, L3mbtl2, Rangap1, Zc3h7b, Tef, LOC667073, Tob2, Phf5a, Aco2, Polr3h, Csdc2, Pmm1, EG545121, 1700029P11Rik, D15Wsu75e, Xrcc6, Nhp2l1, 4930407I10Rik, Mei1, Ccdc134, Srebf2, LOC435145, Tnfrsf13c, Cenpm, 1500009C09Rik, Sept3
Downstream geneNaga, C920005C14Rik, 1500032L24Rik, Ndufa6, Cyp2d22, LOC545123, Cyp2d10, Cyp2d9, EG545124, EG667196, EG667177, 9030605E09Rik, BC018285, Cyp2d13, LOC380998, LOC627860, LOC676200, 1300013D18Rik, LOC271300, Cyp2d26, Tcf20, Nfam1, Serhl, 1110014J01Rik, Poldip3, Cyb5r3, A4galt, LOC100042119, Arfgap3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299L06.bB6Ng01-299L06.g
ACCGA094470GA094471
length1,158645
definitionB6Ng01-299L06.b B6Ng01-299L06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagttctgatgttgccaagtaaccttggtttctgttgcctatgtt
cttatgcttgactcccaccttctgattatctcaagtgctacctgccctca
ctatatctaacctgtccttcctgtgatcctggttgtgtcagaactcctca
gatttcagctgtctctgtgatcctgtgattctgtgatcctgtgattgtga
gatcctgggtgtgccagagctccttggagtcaagcagcctctgggatcct
ggtgtggccaagatcctgggatcctgggcatgttagagcacttgggaatg
aagcttcttctgaattttgtgggactggctgcaaatttcatgccagtccc
agatgcaccaaccccgtccagaagatacccatccactggtcaggtggact
tcctgggtcctccattatttattttaagctgatttggaataccaagcata
gaaaaacaacataggcaatgactaattacatttgacgatgcttctcctat
taaagcagttgcaacaggaaatcctgagaaggtatcaataatcacatgta
catatattacttttccaatatcagaaatatgagtaacatccatttgtcat
aattgattaggtaggggtcctcaagaattaacaccataatgtagtacagg
agctaattgaagacattcaggccaagtctttacaatttgatatgcatata
ctctataaataacaaactattgactatgcaaagaatgagaatgtttggct
aattgttcctatgtaaaacctataatctgcctgaaatgcaagtctgctgt
gacgttgccctcagtaaggagtctgggcaatccagtatgagctcttaaat
agcctatgaagtaagggaatagttcatcctttaaattaagttgtatttgc
ataagtaattgcaaatatgagaaattagtagtatctaaaaaaggaaaagt
ttcaagcagttgcaaccatgagctatatattggctatcatatgcaaattt
aagctgatttgtcacattcagaaacattggctacagcatgtatccaattt
aatatttggtgctgaagcagggaaactcagagattacatggtgaatccaa
ttacattgctggcttcctcaccagtgttgactgcttctgtgttaaatcac
actatgca
gaattctatgtatgtgtgtggagggtgtgtgtgctgtgagtgtttgaatt
ctatgtatatgtgtggagggtgtgtgctgtgagtgttgtggatgcgcatg
tgcctgtgcgtatgaagaatgcgattgtgaggtgtgcatttgtcctatat
agctctgctcactcccaaaactttactgtcagaagttacagtttcatata
ttatcactatcactataagtgtataattattgtcttaaacagacccttct
gctatatcactctagctagcacctcttcctcagtccacgctgaaaaatct
agagcttgctgtttctttttgccggtccagtgagtttcccaagctcagat
cccagacaacttcccaacttggtctcgctactcttcctaactcgactctt
gctgtggcttggttcacccgcatccctaatcttctcccaagcaggcaatc
tgctttccatgttctgcttctccatctctgttaatgccgttgatgccctg
tctggattgtccctgtagccttacctctgcctatttcaacactatctatg
tcttaagactcaagctccaccacatcctttccatgggatctttcacaatc
atttccaccagaaataatccctcctgttaaatgcctgggacattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_82134836_82135480
seq2: B6Ng01-299L06.g_68_712

seq1  GAATTCTATGTATGTGTGTGGAGGGTGTGTGTGCTGTGAGTGTTTGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGTATGTGTGTGGAGGGTGTGTGTGCTGTGAGTGTTTGAATT  50

seq1  CTATGTATATGTGTGGAGGGTGTGTGCTGTGAGTGTTGTGGATGCGCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTATATGTGTGGAGGGTGTGTGCTGTGAGTGTTGTGGATGCGCATG  100

seq1  TGCCTGTGCGTATGAAGAATGCGATTGTGAGGTGTGCATTTGTCCTATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTGCGTATGAAGAATGCGATTGTGAGGTGTGCATTTGTCCTATAT  150

seq1  AGCTCTGCTCACTCCCAAAACTTTACTGTCAGAAGTTACAGTTTCATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGCTCACTCCCAAAACTTTACTGTCAGAAGTTACAGTTTCATATA  200

seq1  TTATCACTATCACTATAAGTGTATAATTATTGTCTTAAACAGACCCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCACTATCACTATAAGTGTATAATTATTGTCTTAAACAGACCCTTCT  250

seq1  GCTATATCACTCTAGCTAGCACCTCTTCCTCAGTCCACGCTGAAAAATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATATCACTCTAGCTAGCACCTCTTCCTCAGTCCACGCTGAAAAATCT  300

seq1  AGAGCTTGCTGTTTCTTTTTGCCGGTCCAGTGAGTTTCCCAAGCTCAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTGCTGTTTCTTTTTGCCGGTCCAGTGAGTTTCCCAAGCTCAGAT  350

seq1  CCCAGACAACTTCCCAACTTGGTCTCGCTACTCTTCCTAACTCGACTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGACAACTTCCCAACTTGGTCTCGCTACTCTTCCTAACTCGACTCTT  400

seq1  GCTGTGGCTTGGTTCACCCGCATCCCTAATCTTCTCCCAAGCAGGCAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGGCTTGGTTCACCCGCATCCCTAATCTTCTCCCAAGCAGGCAATC  450

seq1  TGCTTTCCATGTTCTGCTTCTCCATCTCTGTTAATGCCGTTGATGCCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCCATGTTCTGCTTCTCCATCTCTGTTAATGCCGTTGATGCCCTG  500

seq1  TCTGGATTGTCCCTGTAGCCTTACCTCTGCCTATTTCAACACTATCTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATTGTCCCTGTAGCCTTACCTCTGCCTATTTCAACACTATCTATG  550

seq1  TCTTAAGACTC-AGCTCCAGCCACATCCTTTCCATGGGATCTTTCACAAT  599
      ||||||||||| ||||||| ||||||||||||||||||||||||||||||
seq2  TCTTAAGACTCAAGCTCCA-CCACATCCTTTCCATGGGATCTTTCACAAT  599

seq1  CATTTCCACCAGAAATAATCCCTCCTGTTAAATGCCTGGGACATTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCACCAGAAATAATCCCTCCTGTTAAATGCCTGGGACATTT  645