BAC Information

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BAC

Clone NameB6Ng01-301E12
Chromosome15 (Build37)
Map Location 61,541,077 - 61,542,231
singlet/doubletsinglet
Overlap genenone
Upstream geneEG632412, LOC100040311, D330050I23Rik, 9930014A18Rik, A1bg, LOC100040323
Downstream geneMyc, Pvt1, LOC100040584, H2afy3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301E12.bB6Ng01-301E12.g
ACCGA095632GA095633
length1,2131,155
definitionB6Ng01-301E12.b B6Ng01-301E12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaccaagagctgttgtccatattatgctcttcttttgtatcatag
actaccacaggagatctcaagagcttttatgttggcccaggatcaggatc
acaggtgaggaggacacaacatctgccccaataccagaagtaactgggac
cagcgggacctggtcacccagaaactctgcccgaccagtggcacagtgtc
cttcctgtctgggctggagccctgagcagacgttgagttcaagctccaaa
gccagtcccacaacacccagaggaagatccacttctaggcgctctagcac
accaagggtcataggatcagaggtgaggaggacacaaaatctgccccaac
actttaagtaactaggaccagcaggacccaggcacctaagaactcccccc
aaccagtggcactggttccttcttgtctgaatcagtgccgtgagtagacc
ttgggcacgaactccatagccaggcccacaccactcagaggaaattccac
tctcaggctctctaacatgcccaggactacaggatcccaggaccacagga
tcccagaatctcaggattccatgatcccaagagcttggtcataccaggat
ttcagagtcccagaggcagcctgactcccagtaggtctgacacacccagg
gtctcaggatcccaggatcccagaatcaaaggatcacagagacagctaaa
ctctgaggaagctctgacacaaccaggatcacaggaaggactaaagctca
aagcacacattgtaccccacacaataatagtgggagacttcaacacccta
ttctaagcaatggactgatcatggaaacagaaactaagcagagacacagt
gaagctaacagaagttatgaaccaaatggattaacagatattttatagaa
ttattttcatcctaaagcaaaagaatatacctttctttctcagcatctca
cagtaacttctccaaaactgaccaatatgaattggtcaccaaaacaagcc
tcaacagaatacaaggaagaattgaaataaatccatgccaccctaggcag
aatcaccataagactaagctgatctaatatcaacaaaaacaacgaaagca
cacatttatacatggaagctgaaccatgcctctactcaatgatactggct
cagagaataaggcatgaatcaaaggcatctagaaatgtgttaataaagta
gagaggacacacc
gaattcctggctagccagttcttgagcactgagtggagatcattatgtaa
gaatcctcatcatataagaatcggagtgtttcattggttttgtctctgct
gctctgttacatcagtctttcctccccacacttctaccccactgttcttg
agtttcttctgcatttcttcaaactcacacatgctgtccactacagcaag
gccttcccttggctgttgagtcactagcaagtaccctgagcttggcatga
aacaagctcaacaaacatttgctaagtgaaaacatggtgcacaggaggat
tggatgaccagataaaagtctttcctcttcaaaggcactttctccaatcc
caaatcacggatcaggaccctatggcctccactgggtccagtcaacaaca
ttctcttcttttctcttccatcatcagagtctagctgagaaacccctgaa
ccaagtgctgtggcagagcgacatatacagaagatgtttccaggcagtga
acaatggctaaacacagaagtagagacagaaacaactcaagtcttcagta
atacaacagggccctcgtttagcctctgctcctccctctacggaaaaaaa
ttcttcaacctgaaaccacaaagagctgagaatggaagtctgtagaactg
actatctcagggacaaatccaatctaatgggaaagagatagttacaggaa
ttaaaacgtatggttcttaaatctaagaatattctaacattgtgccaaag
aaacctgtgtattctccacaagtcaaccagcccacactcagtgatgggaa
gctcaagataagaagcccatggtagcagtaacatgaaagtactgtagagt
gtactccaggatgtatcatgggagcctttccccttgctgtctgctagcat
tccttgctagatccaatgattctcagaagaaaacatggggtagaacccaa
gatgcctctgtcctctccaccacctagacttgctgtgttaatggaagaat
gttgctagtagttacatttccatctgtttctattgtagaacaatggtact
gtattctgaaccaggcttgtttcatggaaactagtggcttagtctcttat
ttcttcagatattggaaaaagggacgtacctactctcaaattgtcagaaa
agaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_61541077_61542231
seq2: B6Ng01-301E12.g_65_1219

seq1  GAATTCCTGGCTAGCCAGTTCTTGAGCACTGAGTGGAGATCATTATGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGCTAGCCAGTTCTTGAGCACTGAGTGGAGATCATTATGTAA  50

seq1  GAATCCTCATCATATAAGAATCGGAGTGTTTCATTGGTTTTGTCTCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCTCATCATATAAGAATCGGAGTGTTTCATTGGTTTTGTCTCTGCT  100

seq1  GCTCTGTTACATCAGTCTTTCCTCCCCACACTTCTACCCCACTGTTCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTTACATCAGTCTTTCCTCCCCACACTTCTACCCCACTGTTCTTG  150

seq1  AGTTTCTTCTGCATTTCTTCAAACTCACACATGCTGTCCACTACAGCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTTCTGCATTTCTTCAAACTCACACATGCTGTCCACTACAGCAAG  200

seq1  GCCTTCCCTTGGCTGTTGAGTCACTAGCAAGTACCCTGAGCTTGGCATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCCCTTGGCTGTTGAGTCACTAGCAAGTACCCTGAGCTTGGCATGA  250

seq1  AACAAGCTCAACAAACATTTGCTAAGTGAAAACATGGTGCACAGGAGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCTCAACAAACATTTGCTAAGTGAAAACATGGTGCACAGGAGGAT  300

seq1  TGGATGACCAGATAAAAGTCTTTCCTCTTCAAAGGCACTTTCTCCAATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGACCAGATAAAAGTCTTTCCTCTTCAAAGGCACTTTCTCCAATCC  350

seq1  CAAATCACGGATCAGGACCCTATGGCCTCCACTGGGTCCAGTCAACAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCACGGATCAGGACCCTATGGCCTCCACTGGGTCCAGTCAACAACA  400

seq1  TTCTCTTCTTTTCTCTTCCATCATCAGAGTCTAGCTGAGAAACCCCTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCTTTTCTCTTCCATCATCAGAGTCTAGCTGAGAAACCCCTGAA  450

seq1  CCAAGTGCTGTGGCAGAGCGACATATACAGAAGATGTTTCCAGGCAGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGCTGTGGCAGAGCGACATATACAGAAGATGTTTCCAGGCAGTGA  500

seq1  ACAATGGCTAAACACAGAAGTAGAGACAGAAACAACTCAAGTCTTCAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGCTAAACACAGAAGTAGAGACAGAAACAACTCAAGTCTTCAGTA  550

seq1  ATACAACAGGGCCCTCGTTTAGCCTCTGCTCCTCCCTCTACGGAAAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAACAGGGCCCTCGTTTAGCCTCTGCTCCTCCCTCTACGGAAAAAAA  600

seq1  TTCTTCAACCTGAAACCACAAAGAGCTGAGAATGGAAGTCTGTAGAACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAACCTGAAACCACAAAGAGCTGAGAATGGAAGTCTGTAGAACTG  650

seq1  ACTATCTCAGGGACAAATCCAATCTAATGGGAAAGAGATAGTTACAGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCTCAGGGACAAATCCAATCTAATGGGAAAGAGATAGTTACAGGAA  700

seq1  TTAAAACGTATGGTTCTTAAATCTAAGAATATTCTAACATTGTGCCAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACGTATGGTTCTTAAATCTAAGAATATTCTAACATTGTGCCAAAG  750

seq1  AAACCTGTGTATTCTCCACAAGTCAACCAGCCCACACTCAGTGATGGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTGTGTATTCTCCACAAGTCAACCAGCCCACACTCAGTGATGGGAA  800

seq1  GCTCAAGATAAGAAGCCCATGGTAGCAGTAACATG-AAGTACTGTAGAGT  849
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GCTCAAGATAAGAAGCCCATGGTAGCAGTAACATGAAAGTACTGTAGAGT  850

seq1  GTACTCCAGGATGTATCAT-GGAGCCTTTCCCCTTGCTGTCTGCTAGCAT  898
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTACTCCAGGATGTATCATGGGAGCCTTTCCCCTTGCTGTCTGCTAGCAT  900

seq1  TCCTTGCTAGATCCAATGATTCTCAGAAG-AAACATGGGGTAGAACCCAA  947
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCCTTGCTAGATCCAATGATTCTCAGAAGAAAACATGGGGTAGAACCCAA  950

seq1  GATGCTTCTGTCCTCTCCACCACCTAGACTTGCCTGTGTT-ATGGAAG-A  995
      ||||| |||||||||||||||||||||||||| ||||||| ||||||| |
seq2  GATGCCTCTGTCCTCTCCACCACCTAGACTTG-CTGTGTTAATGGAAGAA  999

seq1  TGTTGCTAGTAGTACAATTCCCATCTG-TTCTA-TGTAGACAAATGGTAC  1043
      |||||||||||||   ||| ||||||| ||||| ||||||  ||||||||
seq2  TGTTGCTAGTAGTTACATTTCCATCTGTTTCTATTGTAGAACAATGGTAC  1049

seq1  TGTA-TCTG-ACCAGGCCTGGTTTCCATGGGAACTAGTGGCTTAATCTCT  1091
      |||| |||| ||||||| ||  || ||||| ||||||||||||| |||| 
seq2  TGTATTCTGAACCAGGCTTG--TTTCATGGAAACTAGTGGCTTAGTCTC-  1096

seq1  TTTATTTCCTCAGATAT--GAAAAAGGAACAGTACCTACCTCCTCCCAAA  1139
       ||||||| ||||||||  |||||||| || |||||||    ||| | ||
seq2  -TTATTTCTTCAGATATTGGAAAAAGGGAC-GTACCTA----CTCTC-AA  1139

seq1  ATTGTAAAGAAAGAGA  1155
      ||||| |  |||||||
seq2  ATTGTCAGAAAAGAGA  1155