BAC Information

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BAC

Clone NameB6Ng01-301E14
Chromosome15 (Build37)
Map Location 13,623,838 - 13,624,616
singlet/doubletsinglet
Overlap genenone
Upstream gene6030458C11Rik, Rnasen, Cdh6, LOC100039907, LOC666686, LOC239338
Downstream geneLOC666708, LOC674819
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301E14.bB6Ng01-301E14.g
ACCGA095636GA095637
length1,115985
definitionB6Ng01-301E14.b B6Ng01-301E14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaataagggaatctcaaatggccgaaaagcacttgaaaaaaaa
aatgttcaagctctttagtcatcagaggaatgccagtgaaaacaacacta
agattctatcttatgccaatcagaatggctaagatcaaaaactctggtga
cagcacatgctggagaagacatggagaaagaggaacactcctccattgct
gttgggattgcaatgtggtacaacaagtctggaaatcaatctggaggttc
ctcagaaaactggaaatagatctaccggaagacccaactctaccactctt
gggcatatctcaaaaaaaaaaaaaaaaggcacaccatatcacaagaacaa
gttctccactatgctcataccagacttatttgtaattgtcagaagctaga
aacaattcagatgtccttcaatggaataatggatacagaaaatgtggttc
atttacacaatgtaattcttttaaactattaagtatgagggcatcataga
tttcccaggcaaatagatgagaatagaaaatatcatcctgagtaaggtaa
ctcagcctccaaaacacatgcattgcatgtactcactgataagtggatat
tatcaaaaaaaaaaatgcagaatagcttgtatacaacccacagactgaaa
gtttaacaagcagaaaggcccaaatgaggatacttcaattccacttagaa
gggggaaaaaataatcactagaggcagagggatggagggacctcaatgga
aaaggggaggaggagggtgaaatggggagcaagaccaggtatggatgtgg
ggcaggagcaaagcctagagagccaggagaaatatgcagcctcaaggtgg
gaggtgggggggaactcctagaaagtaccagagatctggaggtgagacac
ttaagactcaatggggtgaccttagccaaaatgcctacattgaagaaaag
acttcaaagagtcacccccagtagagaagaacgagctcagttcagattgg
gttactatccacacgaaacttctgactcagatgtctgtcctagactgccg
acgaatgaagagaggctgagaaggcaatccatgacatccatttggataca
tccatggggggaatc
gaattctctgagcccaggttgctttctaatataaagagatgactgtggag
agaaagatctagaaggatgaaacctctgatccacccttggtacttttgtt
tctatttatcttcccttttctccttttcttcttcttctcttctcattaaa
gtactggataatatctgaagtgtttttaagttagtttttagaacggtcat
acagtgaattttcttcacatttacccttgtcccagttcctccaagaccca
catctccttccttacatacctgtgttttcccctatcaagtttagtgtttg
tccccacatgtttacaaatgtgtgaccttggagtggaatttgtttggaat
acctgagacaaactctcaaagacagcctgtttttccttcctaagcaatca
tcaattgccaatagctcctcaggtggagatgggagtttgttcttgcctcc
cctctacatgtagcaatttgttctgatgtttctttcagaggcccatgtat
gcttccatagccactggtagtatgtatatgcagctaccatgttataactg
gagcatgctgtatccttgtactcatttactatctctgattattacaatct
tttgtgcaccttcttccaaaataggctcttgaatcttggaggaggtgact
catggtagacattcaatttagtgctgagcatgctgacttctcttattctg
tgaatcccggacagttgtaggtatctttgttgaacatcatctattgcaaa
tagcatcttctctgttaagcattcattggtgcattaatgtatgcatatac
taatgagtcattagtagacagtttagtactatgcacatttagcagaataa
ttgtaggaggctcttctctctggcctctgacttgtgtagccataatttct
tggcctaataatagtgccaggtatgggtttcatcatgtggaccagaactt
aaacccagccaggaagtaggtgattactcctcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_13623838_13624616
seq2: B6Ng01-301E14.g_66_844

seq1  GAATTCTCTGAGCCCAGGTTGCTTTCTAATATAAAGAGATGACTGTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGAGCCCAGGTTGCTTTCTAATATAAAGAGATGACTGTGGAG  50

seq1  AGAAAGATCTAGAAGGATGAAACCTCTGATCCACCCTTGGTACTTTTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGATCTAGAAGGATGAAACCTCTGATCCACCCTTGGTACTTTTGTT  100

seq1  TCTATTTATCTTCCCTTTTCTCCTTTTCTTCTTCTTCTCTTCTCATTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTATCTTCCCTTTTCTCCTTTTCTTCTTCTTCTCTTCTCATTAAA  150

seq1  GTACTGGATAATATCTGAAGTGTTTTTAAGTTAGTTTTTAGAACGGTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGGATAATATCTGAAGTGTTTTTAAGTTAGTTTTTAGAACGGTCAT  200

seq1  ACAGTGAATTTTCTTCACATTTACCCTTGTCCCAGTTCCTCCAAGACCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGAATTTTCTTCACATTTACCCTTGTCCCAGTTCCTCCAAGACCCA  250

seq1  CATCTCCTTCCTTACATACCTGTGTTTTCCCCTATCAAGTTTAGTGTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCCTTCCTTACATACCTGTGTTTTCCCCTATCAAGTTTAGTGTTTG  300

seq1  TCCCCACATGTTTACAAATGTGTGACCTTGGAGTGGAATTTGTTTGGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACATGTTTACAAATGTGTGACCTTGGAGTGGAATTTGTTTGGAAT  350

seq1  ACCTGAGACAAACTCTCAAAGACAGCCTGTTTTTCCTTCCTAAGCAATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAGACAAACTCTCAAAGACAGCCTGTTTTTCCTTCCTAAGCAATCA  400

seq1  TCAATTGCCAATAGCTCCTCAGGTGGAGATGGGAGTTTGTTCTTGCCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTGCCAATAGCTCCTCAGGTGGAGATGGGAGTTTGTTCTTGCCTCC  450

seq1  CCTCTACATGTAGCAATTTGTTCTGATGTTTCTTTCAGAGGCCCATGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACATGTAGCAATTTGTTCTGATGTTTCTTTCAGAGGCCCATGTAT  500

seq1  GCTTCCATAGCCACTGGTAGTATGTATATGCAGCTACCATGTTATAACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCATAGCCACTGGTAGTATGTATATGCAGCTACCATGTTATAACTG  550

seq1  GAGCATGCTGTATCCTTGTACTCATTTACTATCTCTGATTATTACAATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGCTGTATCCTTGTACTCATTTACTATCTCTGATTATTACAATCT  600

seq1  TTTGTGCACCTTCTTCCAAAATAGGCTCTTGAATCTTGGAGGAGGTGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCACCTTCTTCCAAAATAGGCTCTTGAATCTTGGAGGAGGTGACT  650

seq1  CATGGTAGACATTCAATTTAGTGCTGAGCATGCTGACTTCTCTTATTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTAGACATTCAATTTAGTGCTGAGCATGCTGACTTCTCTTATTCTG  700

seq1  TGAATCCCGGACAGTTGTAGGTATCTTTGTTGAACATCATCTATTGCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCCCGGACAGTTGTAGGTATCTTTGTTGAACATCATCTATTGCAAA  750

seq1  TAGCATCTTCTCTGTTAAGCATTCATTGG  779
      |||||||||||||||||||||||||||||
seq2  TAGCATCTTCTCTGTTAAGCATTCATTGG  779