BAC Information

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BAC

Clone NameB6Ng01-302A04
Chromosome15 (Build37)
Map Location 87,438,547 - 87,564,049
singlet/doubletdoublet
Overlap geneAW049604
Upstream geneLOC100042309
Downstream geneLOC100042329, LOC100042340, Zdhhc25, Brd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302A04.bB6Ng01-302A04.g
ACCGA096177GA096178
length1,1531,114
definitionB6Ng01-302A04.b B6Ng01-302A04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,438,547 - 87,439,696)(87,562,935 - 87,564,049)
sequence
gaattcctggaggtctcttgaattcatgcctgtcactaaacttcacccaa
ccctccatacacaagctcccaaggtcatggccattcacagtcactcacag
atgccaggcaccatggccactctcagagaaacggtcacctccaaatccat
aacaaggggtctagtccccggggttcccctctagggaggacttttcttag
aagcccttgttacttatgggaagggtgacctccatttcattctactgggt
tctgcacatcgggaagataagttcagcctctcgggagcagggaaggtgat
gggaactcccagatggataaagacccggcctgtgccgattcgttctcatt
cagcaccgtggtcgcaacatcccaatatagtcattattgcggtttcgctt
tctgtagccgcattataatgcgagcttatgttcaatttgctgggagccag
caaatcgtcgtctgcttcttctcagcacacactcatttgctgcgtgccct
aggtgtttcttaaagtctaggttttacacatagacaaattaaatcttgtt
tttgaatgcgtccctctccagaaccgacataatgtgttttaatagccatc
gcacctctcggggcttggggctcgcgatcatctgcatttccaagcagcac
attacttacagggacatgtcctccatgccggtaatgaagccagtgaatgg
agtgtggtctatgcagggcctcgctgtcgctctcttctgcctctgctcct
tggagggtggtgtcagaaagagtcctccctttgttcactgcgttttgtat
tcattccactgataaccgaatgtgtcttagtgtctttccccacaggacac
cctcaggcagcagcaggacacagtgtcagcaggtacatgaaaggtgatgg
gggccattcctgagagtaagccaggacatggaggggccagggactggcac
ataaaaatgggaggttgtgtagttcctagaccagaggcacacaggtatat
actgtgactgatttaggagtatcagattctgtgcctcagcttggccgctc
atccatcaggatccagggggggcgcatcgatggagtcacaaccttaccaa
ttgaattttacagaaaaacctttaactagaaagaattatactcagaaggt
gag
gaattccatgggtgactgcccaacatactgcccagttcagacatcacatc
aggtgatgactcacttgtggcaccaaccctgggggtagcatcttgcttgt
tctatccgcacacagatggaggccctgagagccaggtcacctctgagtta
gactgtgaactgctgcatggcaacttggtttcaactctctgtggccttaa
ggaagcacagctcctggtttagtttggaaggaaggctggcacacctcttc
tgtctaggatgatatttttgtggagattttgaaaataacacattagcaac
atccttgttcatacaccagtttccacaggtaatggcaaaagcctctgtgg
gaaggtgtgcttcacaggacctaggccctgcttctccctactccagctct
ttctggcaattattcagacctaacagatgcacataactctcagattcaaa
gcccagtgttatctcaacttcaattctgttcattccatctgcaatcatgt
tacctcatctgtgtccctggcatgcttgtcatctgtggaggtcccagata
ttactctttattttcacttcattgaactacaatgcacaagcaaatatatg
tcatgaactaactgtactgatatatgacatcataatgttccaatttctta
tatctcactttttgttttcctttcgtttccataacttggtataactttat
cttcaccttaaactcttcctgtgttgcttagagtgcctttggacagctct
ggaccattgctatcttgaacaactgacctggacagtctttgctttttaaa
tagagacaactggtccatttacatgtactgtttttacaggcaaaggttcc
tgccatacgtaatgctctgtaatggcttctggctacccttctctcctgga
tccactcattttgcacatctcctctgatcccttttttgcttctttttatt
tgtggtgctttatcagaaaacaggctagttctattgtattttaatgccaa
taaaatcaaaggagtccattccaagacagaagcccatccttggaaaactt
gaccacaaagagattgatccctgcacttgaagatgggctggccggtgatc
cttccaactgctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_87438547_87439696
seq2: B6Ng01-302A04.b_46_1198

seq1  GAATTCCTGGAGGTCTCTTGAATTCATGCCTGTCACTAAACTTCACCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGAGGTCTCTTGAATTCATGCCTGTCACTAAACTTCACCCAA  50

seq1  CCCTCCATACACAAGCTCCCAAGGTCATGGCCATTCACAGTCACTCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCATACACAAGCTCCCAAGGTCATGGCCATTCACAGTCACTCACAG  100

seq1  ATGCCAGGCACCATGGCCACTCTCAGAGAAACGGTCACCTCCAAATCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGGCACCATGGCCACTCTCAGAGAAACGGTCACCTCCAAATCCAT  150

seq1  AACAAGGGGTCTAGTCCCCGGGGTTCCCCTCTAGGGAGGACTTTTCTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGGGGTCTAGTCCCCGGGGTTCCCCTCTAGGGAGGACTTTTCTTAG  200

seq1  AAGCCCTTGTTACTTATGGGAAGGGTGACCTCCATTTCATTCTACTGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCTTGTTACTTATGGGAAGGGTGACCTCCATTTCATTCTACTGGGT  250

seq1  TCTGCACATCGGGAAGATAAGTTCAGCCTCTCGGGAGCAGGGAAGGTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACATCGGGAAGATAAGTTCAGCCTCTCGGGAGCAGGGAAGGTGAT  300

seq1  GGGAACTCCCAGATGGATAAAGACCCGGCCTGTGCCGATTCGTTCTCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACTCCCAGATGGATAAAGACCCGGCCTGTGCCGATTCGTTCTCATT  350

seq1  CAGCACCGTGGTCGCAACATCCCAATATAGTCATTATTGCGGTTTCGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACCGTGGTCGCAACATCCCAATATAGTCATTATTGCGGTTTCGCTT  400

seq1  TCTGTAGCCGCATTATAATGCGAGCTTATGTTCAATTTGCTGGGAGCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGCCGCATTATAATGCGAGCTTATGTTCAATTTGCTGGGAGCCAG  450

seq1  CAAATCGTCGTCTGCTTCTTCTCAGCACACACTCATTTGCTGCGTGCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCGTCGTCTGCTTCTTCTCAGCACACACTCATTTGCTGCGTGCCCT  500

seq1  AGGTGTTTCTTAAAGTCTAGGTTTTACACATAGACAAATTAAATCTTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTTCTTAAAGTCTAGGTTTTACACATAGACAAATTAAATCTTGTT  550

seq1  TTTGAATGCGTCCCTCTCCAGAACCGACATAATGTGTTTTAATAGCCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATGCGTCCCTCTCCAGAACCGACATAATGTGTTTTAATAGCCATC  600

seq1  GCACCTCTCGGGGCTTGGGGCTCGCGATCATCTGCATTTCCAAGCAGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTCTCGGGGCTTGGGGCTCGCGATCATCTGCATTTCCAAGCAGCAC  650

seq1  ATTACTTACAGGGACATGTCCTCCATGCCGGTAATGAAGCCAGTGAATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTACAGGGACATGTCCTCCATGCCGGTAATGAAGCCAGTGAATGG  700

seq1  AGTGTGGTCTATGCAGGGCCTCGCTGTCGCTCTCTTCTGCCTCTGCTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGTCTATGCAGGGCCTCGCTGTCGCTCTCTTCTGCCTCTGCTCCT  750

seq1  TGGAGGGTGGTGTCAGAAAGAGTCCTCCCTTTGTTCACTGCGTTTTGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGGTGGTGTCAGAAAGAGTCCTCCCTTTGTTCACTGCGTTTTGTAT  800

seq1  TCATTCCACTGATAACCGAATGTGTCTTAGTGTCTTTCCCCACAGGACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCACTGATAACCGAATGTGTCTTAGTGTCTTTCCCCACAGGACAC  850

seq1  CCTCAGGCAGCAGCAGGACACAGTGTCAGCAGGTACATG-AAGGTGATGG  899
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CCTCAGGCAGCAGCAGGACACAGTGTCAGCAGGTACATGAAAGGTGATGG  900

seq1  GGGCCATTCCTGAGAGTAAGCCAGGACATGGAGGGGCCAGGGACTGGCAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCATTCCTGAGAGTAAGCCAGGACATGGAGGGGCCAGGGACTGGCAC  950

seq1  ATAAAAATGGGAGGTTGTGTAGTTCCTAGACCAGAGGCACACAGGTATAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATGGGAGGTTGTGTAGTTCCTAGACCAGAGGCACACAGGTATAT  1000

seq1  ACTGTGACTGATTTAGGAGTATCAGGATTCTGTG-CTCAGC-TGGCCGCT  1047
      |||||||||||||||||||||||| ||||||||| |||||| ||||||||
seq2  ACTGTGACTGATTTAGGAGTATCA-GATTCTGTGCCTCAGCTTGGCCGCT  1049

seq1  CATCCATCAGGATCCCAGGGGGGCGCCATCGATGGAGTCACACCCTTACC  1097
      |||||||||||||||  |||||||| |||||||||||||||| |||||||
seq2  CATCCATCAGGATCCAGGGGGGGCG-CATCGATGGAGTCACAACCTTACC  1098

seq1  AAATTGATTTAACAG--AAACCCTAAACTAGAAAAGGATTATACTCAG-A  1144
      || |  |||| ||||  ||||| | |||||| |||| ||||||||||| |
seq2  AATTGAATTTTACAGAAAAACCTTTAACTAG-AAAGAATTATACTCAGAA  1147

seq1  GGTGAG  1150
      ||||||
seq2  GGTGAG  1153

seq1: chr15_87562935_87564049
seq2: B6Ng01-302A04.g_66_1179 (reverse)

seq1  GCAGCAGTGTGGGAAGGATCAC--GCCAGCCCATCCTC-AGTGCA-GGAT  46
      ||||||  || |||||||||||  ||||||||||| || |||||| ||||
seq2  GCAGCA--GTTGGAAGGATCACCGGCCAGCCCATCTTCAAGTGCAGGGAT  48

seq1  CATTCCTCTTTGTGGTCAAAGGTTTCC-AGGAT-GGCTTCTGTCCTTTGG  94
      || | |||||||||||| ||| ||||| ||||| ||||||||||  ||||
seq2  CAAT-CTCTTTGTGGTC-AAGTTTTCCAAGGATGGGCTTCTGTC--TTGG  94

seq1  GAAATGGACTCC-TTGATTTTATTGGCATTAAAAATACCAATAGAACTAA  143
        |||||||||| ||||||||||||||||| |||||| |||||||||| |
seq2  --AATGGACTCCTTTGATTTTATTGGCATT-AAAATA-CAATAGAACT-A  139

seq1  GCCTGTTTTCTGATAAAGCACCACAAAT-AAAAGAAGCAAAAAA-GGATC  191
      |||||||||||||||||||||||||||| ||||||||||||||| |||||
seq2  GCCTGTTTTCTGATAAAGCACCACAAATAAAAAGAAGCAAAAAAGGGATC  189

seq1  AGAGGAGATGTGCAAAATGAGTGGATCCAGGAGAGAAGGGTAGCCAGAAG  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGATGTGCAAAATGAGTGGATCCAGGAGAGAAGGGTAGCCAGAAG  239

seq1  CCATTACAGAGCATTACGTATGGCAGGAACC-TTGCCTGTAAAAACAGTA  290
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCATTACAGAGCATTACGTATGGCAGGAACCTTTGCCTGTAAAAACAGTA  289

seq1  CATGTAAATGGACCAGTTGTCTCTATTTAAAAAGCAAAGACTGTCCAGGT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAAATGGACCAGTTGTCTCTATTTAAAAAGCAAAGACTGTCCAGGT  339

seq1  CAGTTGTTCAAGATAGCAATGGTCCAGAGCTGTCCAAAGGCACTCTAAGC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGTTCAAGATAGCAATGGTCCAGAGCTGTCCAAAGGCACTCTAAGC  389

seq1  AACACAGGAAGAGTTTAAGGTGAAGATAAAGTTATACCAAGTTATGGAAA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGGAAGAGTTTAAGGTGAAGATAAAGTTATACCAAGTTATGGAAA  439

seq1  CGAAAGGAAAACAAAAAGTGAGATATAAGAAATTGGAACATTATGATGTC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAGGAAAACAAAAAGTGAGATATAAGAAATTGGAACATTATGATGTC  489

seq1  ATATATCAGTACAGTTAGTTCATGACATATATTTGCTTGTGCATTGTAGT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCAGTACAGTTAGTTCATGACATATATTTGCTTGTGCATTGTAGT  539

seq1  TCAATGAAGTGAAAATAAAGAGTAATATCTGGGACCTCCACAGATGACAA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGAAGTGAAAATAAAGAGTAATATCTGGGACCTCCACAGATGACAA  589

seq1  GCATGCCAGGGACACAGATGAGGTAACATGATTGCAGATGGAATGAACAG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCCAGGGACACAGATGAGGTAACATGATTGCAGATGGAATGAACAG  639

seq1  AATTGAAGTTGAGATAACACTGGGCTTTGAATCTGAGAGTTATGTGCATC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAAGTTGAGATAACACTGGGCTTTGAATCTGAGAGTTATGTGCATC  689

seq1  TGTTAGGTCTGAATAATTGCCAGAAAGAGCTGGAGTAGGGAGAAGCAGGG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGGTCTGAATAATTGCCAGAAAGAGCTGGAGTAGGGAGAAGCAGGG  739

seq1  CCTAGGTCCTGTGAAGCACACCTTCCCACAGAGGCTTTTGCCATTACCTG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGTCCTGTGAAGCACACCTTCCCACAGAGGCTTTTGCCATTACCTG  789

seq1  TGGAAACTGGTGTATGAACAAGGATGTTGCTAATGTGTTATTTTCAAAAT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACTGGTGTATGAACAAGGATGTTGCTAATGTGTTATTTTCAAAAT  839

seq1  CTCCACAAAAATATCATCCTAGACAGAAGAGGTGTGCCAGCCTTCCTTCC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAAAAATATCATCCTAGACAGAAGAGGTGTGCCAGCCTTCCTTCC  889

seq1  AAACTAAACCAGGAGCTGTGCTTCCTTAAGGCCACAGAGAGTTGAAACCA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAACCAGGAGCTGTGCTTCCTTAAGGCCACAGAGAGTTGAAACCA  939

seq1  AGTTGCCATGCAGCAGTTCACAGTCTAACTCAGAGGTGACCTGGCTCTCA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCCATGCAGCAGTTCACAGTCTAACTCAGAGGTGACCTGGCTCTCA  989

seq1  GGGCCTCCATCTGTGTGCGGATAGAACAAGCAAGATGCTACCCCCAGGGT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCCATCTGTGTGCGGATAGAACAAGCAAGATGCTACCCCCAGGGT  1039

seq1  TGGTGCCACAAGTGAGTCATCACCTGATGTGATGTCTGAACTGGGCAGTA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCCACAAGTGAGTCATCACCTGATGTGATGTCTGAACTGGGCAGTA  1089

seq1  TGTTGGGCAGTCACCCATGGAATTC  1115
      |||||||||||||||||||||||||
seq2  TGTTGGGCAGTCACCCATGGAATTC  1114