BAC Information

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BAC

Clone NameB6Ng01-303I24
Chromosome15 (Build37)
Map Location 65,019,585 - 65,020,638
singlet/doubletsinglet
Overlap genenone
Upstream geneDdef1, Adcy8, LOC268812, LOC100040790
Downstream geneLOC665836, C920006C10Rik, Oc90, F930104E18Rik, LOC100040835, Kcnq3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303I24.bB6Ng01-303I24.g
ACCGA097333GA097334
length1,1721,059
definitionB6Ng01-303I24.b B6Ng01-303I24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaacaactcacttaaagaaatacaggagaacactgctaaagagtt
acaagtccttaaagaaaaacaggaaaacactgctaaagagttacaagtcc
ttaaagaaaaacaggaaaacacaaccaaacaggtagaagtccttatagaa
aaacaggaaaacacatccaaacaggtgatggaaatgaacaaaaccatact
agacctaaaaagggaagtagacacaataaagaaaacccaaagtgaggcga
cgctggagatagaaaccctaggaaagaaatctggaaccatagatgccagc
atcagcaacagaatacaagagatggaagagagaatctcaggtgcagaaga
ctccatagagaacatcggcacaacaatcaaagaaaatggaaaatgcaaaa
agatcctaactcaaaacatccaggaaatccaggacacaatgagaagacca
aacctacggataataggagtggatgagaatgaagattttcaactcaaagg
accagcaaacatcttcaacaaaattattgaagaaaacttcccaaatctaa
agaaagagatgcccatgaacatacaagaagcctacagaactccaaataga
ctggaccagaaaagaaattcctcccgacacataataatcagaacaccaaa
tgcactaaataaagatagaatactaaaagcagtaagggaaaaaggtcaag
taacatataaaggcaagcctatcagaattacaccagatttttcaccagag
actatgaaagccagaagagcctggtcagatgttatacagacactaagaga
acataaatgccagcccaggctactatacccagccaaactctcaattacca
tagatggagaaaccaaagtattccacgacaaaactaaattcacccattat
ctctccacgaatccagcccttcaaaggataataacagaaaaaaccataca
aggacgggaaccacgccctagaaaaaacagagatatccatcaacaaccta
aaagaagacaccacaagaacagaatgcccaacttaacacaaaaatacagg
aagcacatttacgttccctaatatctctaatatcaatggacttcagtccc
caataaagacttggactaacggaactgctaccgaaccagtaatctcatca
ttcctggctgcgctttacagag
gaattcacacaatgacgaaatgggaaaagacccaaatgacactattataa
gcatggaggaaaacatctatctgtattgaaaaaaaaaaaaaaaaaaagga
accttttagacaattcaagagaaatacttactctgaattcaaaaccagga
ataatttcttttcagcaatgaatcagttattggagtttgaattttactgg
agaaatttgcacaatattttatgtgtctacctggggcaagataatttcat
cattacaattaagtcaataatgataataaaacctggtaacatgagtctct
ttccataataatcattctcttgaatataggtgcccctctttgcatacaaa
gtacttttgttaattcaagttcattttaccctcacaaccaagcaaatagg
tattattaataccttgcttaaagtaaaatgttagggctcctagagggaag
atattagagatgatagatggaattttgatctctaagccctctcctctatt
atatactgctttcctccaaaatagttttccaaaccattggcatcattatg
caacatctaaattttgtgtgattattatctttaattttaattaaaatata
aatacattcgtttctattttccttccctatctttaacccttcccatgttc
ctttccaccaaccccctctccaggcacccttgtcatttcctctcaaattc
atagtctctttttctttgattattattgctacatttataaatatatataa
gcacataatatataagtacaacctgttgagttttttggaattgcctgtaa
tgtatataattccaggggctgatcacttggaattagatagcccaaatagg
tggctcttccctgggggaagtcatacttttctttctcgaggtatttctta
gttactgatagtttttaatctatgggtggagcttagtgcaattttcccct
tcttgttttaacatacataatggtgctattattgctcaggtcttgtttag
gcagtcatatgttgaggtaatcataaatgtagcttctcttgtcaatgcag
aaagcatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_65019585_65020638
seq2: B6Ng01-303I24.g_69_1127

seq1  GAATTCACACAATGACGAAATGGGAAAAGACCCAAATGACACTATTATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACAATGACGAAATGGGAAAAGACCCAAATGACACTATTATAA  50

seq1  GCATGGAGGAAAACATCTATCTGTATTGAAAAAAAAAAAAAAAAAAAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGAGGAAAACATCTATCTGTATTGAAAAAAAAAAAAAAAAAAAGGA  100

seq1  ACCTTTTAGACAATTCAAGAGAAATACTTACTCTGAATTCAAAACCAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTAGACAATTCAAGAGAAATACTTACTCTGAATTCAAAACCAGGA  150

seq1  ATAATTTCTTTTCAGCAATGAATCAGTTATTGGAGTTTGAATTTTACTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTCTTTTCAGCAATGAATCAGTTATTGGAGTTTGAATTTTACTGG  200

seq1  AGAAATTTGCACAATATTTTATGTGTCTACCTGGGGCAAGATAATTTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTGCACAATATTTTATGTGTCTACCTGGGGCAAGATAATTTCAT  250

seq1  CATTACAATTAAGTCAATAATGATAATAAAACCTGGTAACATGAGTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACAATTAAGTCAATAATGATAATAAAACCTGGTAACATGAGTCTCT  300

seq1  TTCCATAATAATCATTCTCTTGAATATAGGTGCCCCTCTTTGCATACAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATAATAATCATTCTCTTGAATATAGGTGCCCCTCTTTGCATACAAA  350

seq1  GTACTTTTGTTAATTCAAGTTCATTTTACCCTCACAACCAAGCAAATAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTTGTTAATTCAAGTTCATTTTACCCTCACAACCAAGCAAATAGG  400

seq1  TATTATTAATACCTTGCTTAAAGTAAAATGTTAGGGCTCCTAGAGGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTAATACCTTGCTTAAAGTAAAATGTTAGGGCTCCTAGAGGGAAG  450

seq1  ATATTAGAGATGATAGATGGAATTTTGATCTCTAAGCCCTCTCCTCTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAGAGATGATAGATGGAATTTTGATCTCTAAGCCCTCTCCTCTATT  500

seq1  ATATACTGCTTTCCTCCAAAATAGTTTTCCAAACCATTGGCATCATTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTGCTTTCCTCCAAAATAGTTTTCCAAACCATTGGCATCATTATG  550

seq1  CAACATCTAAATTTTGTGTGATTATTATCTTTAATTTTAATTAAAATATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATCTAAATTTTGTGTGATTATTATCTTTAATTTTAATTAAAATATA  600

seq1  AATACATTCGTTTCTATTTTCCTTCCCTATCTTTAACCCTTCCCATGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATTCGTTTCTATTTTCCTTCCCTATCTTTAACCCTTCCCATGTTC  650

seq1  CTTTCCACCAACCCCCTCTCCAGGCACCCTTGTCATTTCCTCTCAAATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCACCAACCCCCTCTCCAGGCACCCTTGTCATTTCCTCTCAAATTC  700

seq1  ATAGTCTCTTTTTCTTTGATTATTATTGCTACATTTATAAATATATATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCTCTTTTTCTTTGATTATTATTGCTACATTTATAAATATATATAA  750

seq1  GCACATAATATATAAGTACAACCTGTTGAGTTTTTTGGAATTGCCTGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATAATATATAAGTACAACCTGTTGAGTTTTTTGGAATTGCCTGTAA  800

seq1  TGTATATAATTCCA-GGGCTGATCACTTGGAATTAGATAG-CCAAATAGG  848
      |||||||||||||| ||||||||||||||||||||||||| |||||||||
seq2  TGTATATAATTCCAGGGGCTGATCACTTGGAATTAGATAGCCCAAATAGG  850

seq1  TGGCTCTTCCCT-GGGGAAGTCATAC-TTTCTTTCTCGAGGTATTTCTTA  896
      |||||||||||| ||||||||||||| |||||||||||||||||||||||
seq2  TGGCTCTTCCCTGGGGGAAGTCATACTTTTCTTTCTCGAGGTATTTCTTA  900

seq1  GTTACTGATAGTTTTTAATCTATGGGTGGAGCTTAGTGCAATTTTCCCCT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTGATAGTTTTTAATCTATGGGTGGAGCTTAGTGCAATTTTCCCCT  950

seq1  TC-TGTTTTAACATACATAATGGTGCTATTATTGCTCAGGTCTTGTTTAG  995
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTTTAACATACATAATGGTGCTATTATTGCTCAGGTCTTGTTTAG  1000

seq1  GCAGTCATATTGTTGAGGT-ATCATAAATGTAGCTTCTC-TGTCATTGCC  1043
      ||||||||| ||||||||| ||||||||||||||||||| ||||| || |
seq2  GCAGTCATA-TGTTGAGGTAATCATAAATGTAGCTTCTCTTGTCAATG-C  1048

seq1  AGAAAGCATGA  1054
      |||||||||||
seq2  AGAAAGCATGA  1059