BAC Information

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BAC

Clone NameB6Ng01-303N16
Chromosome15 (Build37)
Map Location 23,384,315 - 23,385,469
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545091, Cdh18
Downstream geneLOC624863, LOC666989
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303N16.bB6Ng01-303N16.g
ACCGA097554GA097555
length1,1821,160
definitionB6Ng01-303N16.b B6Ng01-303N16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtactccctttttatttgtttgcttgtttaattttaaactcca
gattgtattgccttcctggtccatccttggaatgtaccacatccaatatc
tcctccccaccctcctgtctctatgaggatgtcctcacctcccaccccta
ccccacctgacctctaatctcccttggacctccagtctctggagggttgg
gtacattttctctgactacccagaaatcaactgctgtatatgagtttggg
ggcctcatatcagctggtgtatgctgcctggttggtgttccagtatctga
gagaactcaggggtccaggttaattgagactgctggtcctccaacaagat
tttcctcttcctcaactccttccagctttaccctatttcaaccaaagtgg
tcagcagcttctgaacaatggttggatgcaaatatctgcatctgactctt
tcagctgcttgttggttcttttagagggcagtgatgataggtcccttttt
gtgagtcctccatagcctcagtaatagtgttaggtcttgcgacctcccct
tgagctggatcccactttgggcctgtcactgaaccttcttttcttcaggc
ttctctccatttccattcatgcagttcttttacacaggatcaattatcag
taagagttttgactgtgagatgacaaccctttcccttacctgatgccctg
tctttctactggaggtgggctctacaagttccctctccctaatgtagaaa
atttgatctaaagtctctccctttgagcctgtgagtctctcacctccaag
gcctatggtacattctggagggtcccctcaacctcctacctcttgaggtt
gcctgtttccattcattcttctggtcctcagggatttcagtccttttttc
cccacccagtaaccaatcacattcccttctctgccacccccatcctctta
ctcttccaggtctctcctaacccccttgcagctgcttcttctgctcccaa
gtgggactgaggcatctcgcttttaattgggttattgggatgtggtgtat
aattttttgaggttctttgtaagtccagaatataccctcttgtcagaatt
gagagttgtgaagaatcctttccaatctgtagccaaggtttgtcaattgg
acaggattctttttcttgggcaataagacgcc
gaattcacgctctgaaagtgtacagccagagagcagcagaattctgtcag
gtgaagcctgataaatgtcagtagctggtgaccctgagatttgactggta
ggggaaaggagagccatggtagaataaaaacatgccccagctcctccttg
acaggagttaagtgactcagcagggcacagtggctgctgcatccattaga
ggatgttggatgcttggtttgtaactcaggggcgattatgtgtgcactat
tttgtttaggaatgggagaaatcactaaatgttttcttgaaaccctgtgg
ataaaaacagaattttaaatgtttacgctcgatggcgaaattaagcacat
tacaacaccagctgcgagttcttatttgaaggccaaaaataaaactatgg
ggatattgactgctctgcagctgacaatgctaaagaaacataaaaaagac
ctaaaaagctcccaagggcctctaatgtgtctcaaacaaaatgactatat
tgcaatgccaatgctctgtgaaatttgaaagaaagagcatcagaagatac
attaaaagctacatagtcagggttgaatcattccatatgcaatttctcag
ttaagctttcagctaatgcagcgccaaacgtacctacacaaaacattaac
atatttttcttttaaaatataagcaattcatcatttatttttggaaagaa
aaattaatattgcaaaattaatgaaaaatgatacaatgaaggcaaaagta
aaattttaaaaatagtaatacaaaaattaaaaaaaaaaatagaaatggga
gcctagttctttaatgtcttccgaagccagggtagtacagtctttgtcag
catcctgcggacacagggcatgctagaccttcacaagaggatgctactga
gagggatttaggtatacagctgtgcccttctctcctgtattcttgcttcc
cacctggcattgggtgagtactttctctcatcaagcaagtcacgatgctt
tgtttttttacctccagactgaagcactgaccacgtgaacccaagctgaa
ggcatctggaaggccaagattcaggtttccttactctcaatattctttaa
agagctcatgtgatagccaatgaatactgatccagaaataacaggttatt
gggtgcaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_23384315_23385469
seq2: B6Ng01-303N16.g_66_1225 (reverse)

seq1  TATT-CACCCA--TACCTGTTATTTCTGAATCAGTATTTCATT-GCTATC  46
      |||| ||||||   |||||||||||||| ||||||| |||||| ||||||
seq2  TATTGCACCCAATAACCTGTTATTTCTGGATCAGTA-TTCATTGGCTATC  49

seq1  ACATGA-CTCTTTAAAGAATTAATGAGAAGGTAGGAAAACTGAATCCTGG  95
      |||||| |||||||||||| || |||| ||  |||||| ||||||| |||
seq2  ACATGAGCTCTTTAAAGAA-TATTGAG-AGTAAGGAAACCTGAATCTTGG  97

seq1  C--TTCAGATG-CTTCAGCCTTGGGTCACGTGGTCAAGTGCTTCAAGTCT  142
      |  | |||||| ||||||| | || |||||||||| |||||||| |||||
seq2  CCTTCCAGATGCCTTCAGCTTGGGTTCACGTGGTC-AGTGCTTC-AGTCT  145

seq1  -GAGGT-AAAAAACAAAGCATCGTGACTTGCTTGATGAGAGAAAGTACTC  190
       ||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTAAAAAAACAAAGCATCGTGACTTGCTTGATGAGAGAAAGTACTC  195

seq1  ACCCAATGCCAGGTGGGAAGCAAGAATACAGGAGAGAAGGGCACAGCTGT  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAATGCCAGGTGGGAAGCAAGAATACAGGAGAGAAGGGCACAGCTGT  245

seq1  ATACCTAAATCCCTCTCAGTAGCATCCTCTTGTGAAGGTCTAGCATGCCC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTAAATCCCTCTCAGTAGCATCCTCTTGTGAAGGTCTAGCATGCCC  295

seq1  TGTGTCCGCAGGATGCTGACAAAGACTGTACTACCCTGGCTTCGGAAGAC  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCGCAGGATGCTGACAAAGACTGTACTACCCTGGCTTCGGAAGAC  345

seq1  ATTAAAGAACTAGGCTCCCATTTCTATTTTTTTTTTTAATTTTTGTATTA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGAACTAGGCTCCCATTTCTATTTTTTTTTTTAATTTTTGTATTA  395

seq1  CTATTTTTAAAATTTTACTTTTGCCTTCATTGTATCATTTTTCATTAATT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTAAAATTTTACTTTTGCCTTCATTGTATCATTTTTCATTAATT  445

seq1  TTGCAATATTAATTTTTCTTTCCAAAAATAAATGATGAATTGCTTATATT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAATATTAATTTTTCTTTCCAAAAATAAATGATGAATTGCTTATATT  495

seq1  TTAAAAGAAAAATATGTTAATGTTTTGTGTAGGTACGTTTGGCGCTGCAT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGAAAAATATGTTAATGTTTTGTGTAGGTACGTTTGGCGCTGCAT  545

seq1  TAGCTGAAAGCTTAACTGAGAAATTGCATATGGAATGATTCAACCCTGAC  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGAAAGCTTAACTGAGAAATTGCATATGGAATGATTCAACCCTGAC  595

seq1  TATGTAGCTTTTAATGTATCTTCTGATGCTCTTTCTTTCAAATTTCACAG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGCTTTTAATGTATCTTCTGATGCTCTTTCTTTCAAATTTCACAG  645

seq1  AGCATTGGCATTGCAATATAGTCATTTTGTTTGAGACACATTAGAGGCCC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGGCATTGCAATATAGTCATTTTGTTTGAGACACATTAGAGGCCC  695

seq1  TTGGGAGCTTTTTAGGTCTTTTTTATGTTTCTTTAGCATTGTCAGCTGCA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGCTTTTTAGGTCTTTTTTATGTTTCTTTAGCATTGTCAGCTGCA  745

seq1  GAGCAGTCAATATCCCCATAGTTTTATTTTTGGCCTTCAAATAAGAACTC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTCAATATCCCCATAGTTTTATTTTTGGCCTTCAAATAAGAACTC  795

seq1  GCAGCTGGTGTTGTAATGTGCTTAATTTCGCCATCGAGCGTAAACATTTA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGGTGTTGTAATGTGCTTAATTTCGCCATCGAGCGTAAACATTTA  845

seq1  AAATTCTGTTTTTATCCACAGGGTTTCAAGAAAACATTTAGTGATTTCTC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTGTTTTTATCCACAGGGTTTCAAGAAAACATTTAGTGATTTCTC  895

seq1  CCATTCCTAAACAAAATAGTGCACACATAATCGCCCCTGAGTTACAAACC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCTAAACAAAATAGTGCACACATAATCGCCCCTGAGTTACAAACC  945

seq1  AAGCATCCAACATCCTCTAATGGATGCAGCAGCCACTGTGCCCTGCTGAG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATCCAACATCCTCTAATGGATGCAGCAGCCACTGTGCCCTGCTGAG  995

seq1  TCACTTAACTCCTGTCAAGGAGGAGCTGGGGCATGTTTTTATTCTACCAT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTAACTCCTGTCAAGGAGGAGCTGGGGCATGTTTTTATTCTACCAT  1045

seq1  GGCTCTCCTTTCCCCTACCAGTCAAATCTCAGGGTCACCAGCTACTGACA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTCCTTTCCCCTACCAGTCAAATCTCAGGGTCACCAGCTACTGACA  1095

seq1  TTTATCAGGCTTCACCTGACAGAATTCTGCTGCTCTCTGGCTGTACACTT  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAGGCTTCACCTGACAGAATTCTGCTGCTCTCTGGCTGTACACTT  1145

seq1  TCAGAGCGTGAATTC  1155
      |||||||||||||||
seq2  TCAGAGCGTGAATTC  1160