BAC Information

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BAC

Clone NameB6Ng01-304B19
Chromosome15 (Build37)
Map Location 52,227,151 - 52,228,273
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039662, Eif3s3, LOC100039679, D530033C11Rik, Rad21, Aard, LOC100039720, LOC665219, Slc30a8
Downstream geneLOC100039748, Thrap6, LOC100039745, Ext1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304B19.bB6Ng01-304B19.g
ACCGA097747GA097748
length1,0071,120
definitionB6Ng01-304B19.b B6Ng01-304B19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttcctttctctatttctattattcttagatttggtcttttca
gatttcctagatgtttggtttcaggagattttcatatttaacactttttt
caccaaggtatttatttattctaatatgtcttcaatgcctaaaattctct
tttgcatctttttttattctgctgataatgcttgactctgaggtttttaa
ttaaagttcctagattttttttttcagatttctctcagtttgttttactt
ctttttattattgattttatttccactctttggtcttcaatggttgtact
catttctttccattgtttatttgtgttttcatagatttctttgagggggt
tagtcagtttttttttctttaaggacctcttttatatccatatattttaa
tgtttttttcttgtgttttatctatattgaaatactcaggtcctgataag
gtaggcttgctgggctctagtggcaacacattgttctggctgttgttgac
tgtgttttcatgctggtgtctaggcatcaagaatggagagagaggtgata
atctacaattagtctagatacttatttgacctgtgggttcttagggttct
tagtttgttgttgtgactgagataatgcaatgaattgggaagaaggacat
ttggagggaaagatctgtctagtccactgggaatggggacaaatgaggaa
gggagactttttcccacaatttgattagtttctttcataggttagaaaag
tatatattggatggatcagagggctcccaatggaggatctagagaaagta
cccaaggagctaaagggatctgcaaccctataggtggaacaacattatga
actaaccagtaccccggagcttcttgactccagctgcatatgtatcaaaa
gatggcctagtcggccatcactgaaaagagaggccattagacttgtaact
gtatatgctcaagtacaggggacgccaggactaaaattgggatgggtggg
taggagg
gaattctttttgaagactcagataggaggaatggggtgtgcggtgtctct
aggaacccctgcattatgaaatgggaccactgggctgaaggagtgctttg
aagacctgcttctgaaaagggtctctgatgattccatggggttcttcttt
tgcaggctctatggaagaaagaaaaacacctttatgataaaaattaccta
tttctctttgacttttttcataaatatgtgtgaaatttaaaatacatttc
aaagaggaaaaatgatccttgttcaatggaattctatgaggggaaaaacc
aattggagagaaaaagggatttgtctattgtcagtgtgtctttatgtgga
gagacaatctttgatgtagctgatagcttggttatataatagtccaagaa
tacagaagtagcatgtgatgtattatgtagcacttgagaccaaagtttgc
tcctctcagactagcatgaaaagttcactctggaaatttctattgaaaaa
gaaaatttctttgtaataaatcaggacctgtgaaagttgtctttaagtag
gttcctcatatacagttcaggaaagaaaaaaagttaactcattaagatta
atggctcctgaagcatcccagcatgctacagagactaaacttttaacaaa
gaagcttgcttctaaggaggtaggtattgaacctgccagaacagcaagta
agtcatgctttaccgaaggcagtaagcaattctaaagatggctatctcta
tcaactatcccaccagaaaataaaagaacaatgacggtcatctggaaaaa
aaatgaatttaaaaaggtcagctcaccaaaatgaagcagaaagaaaagct
aactaaattgagaactggagagagagagagagagagagagagagagagag
agagagagagagagagagagagtgagagttaccctaatctttatatggag
atgacatgaataggcagagaaataatgtgtacagagcattagtctccagt
ataccaaataaaaatgctgaattttcttcagccctctgtgcaatggaata
tagtgctgaacttgaaaaccaatgcaagtgaacgcaattgcctaccatta
ggactctctctctaagctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_52227151_52228273
seq2: B6Ng01-304B19.g_66_1185

seq1  GAATTCTTTTTGAAGACTCAGATAGGAGGAATGGGGTGTGCGGTGTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTGAAGACTCAGATAGGAGGAATGGGGTGTGCGGTGTCTCT  50

seq1  AGGAACCCCTGCATTATGAAATGGGACCACTGGGCTGAAGGAGTGCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCCCTGCATTATGAAATGGGACCACTGGGCTGAAGGAGTGCTTTG  100

seq1  AAGACCTGCTTCTGAAAAGGGTCTCTGATGATTCCATGGGGTTCTTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTGCTTCTGAAAAGGGTCTCTGATGATTCCATGGGGTTCTTCTTT  150

seq1  TGCAGGCTCTATGGAAGAAAGAAAAACACCTTTATGATAAAAATTACCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGCTCTATGGAAGAAAGAAAAACACCTTTATGATAAAAATTACCTA  200

seq1  TTTCTCTTTGACTTTTTTCATAAATATGTGTGAAATTTAAAATACATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTTTGACTTTTTTCATAAATATGTGTGAAATTTAAAATACATTTC  250

seq1  AAAGAGGAAAAATGATCCTTGTTCAATGGAATTCTATGAGGGGAAAAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGAAAAATGATCCTTGTTCAATGGAATTCTATGAGGGGAAAAACC  300

seq1  AATTGGAGAGAAAAAGGGATTTGTCTATTGTCAGTGTGTCTTTATGTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGAGAGAAAAAGGGATTTGTCTATTGTCAGTGTGTCTTTATGTGGA  350

seq1  GAGACAATCTTTGATGTAGCTGATAGCTTGGTTATATAATAGTCCAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAATCTTTGATGTAGCTGATAGCTTGGTTATATAATAGTCCAAGAA  400

seq1  TACAGAAGTAGCATGTGATGTATTATGTAGCACTTGAGACCAAAGTTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAAGTAGCATGTGATGTATTATGTAGCACTTGAGACCAAAGTTTGC  450

seq1  TCCTCTCAGACTAGCATGAAAAGTTCACTCTGGAAATTTCTATTGAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCAGACTAGCATGAAAAGTTCACTCTGGAAATTTCTATTGAAAAA  500

seq1  GAAAATTTCTTTGTAATAAATCAGGACCTGTGAAAGTTGTCTTTAAGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTTCTTTGTAATAAATCAGGACCTGTGAAAGTTGTCTTTAAGTAG  550

seq1  GTTCCTCATATACAGTTCAGGAAAGAAAAAAAGTTAACTCATTAAGATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTCATATACAGTTCAGGAAAGAAAAAAAGTTAACTCATTAAGATTA  600

seq1  ATGGCTCCTGAAGCATCCCAGCATGCTACAGAGACTAAACTTTTAACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCCTGAAGCATCCCAGCATGCTACAGAGACTAAACTTTTAACAAA  650

seq1  GAAGCTTGCTTCTAAGGAGGTAGGTATTGAACCTGCCAGAACAGCAAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTTGCTTCTAAGGAGGTAGGTATTGAACCTGCCAGAACAGCAAGTA  700

seq1  AGTCATGCTTTACCGAAGGCAGTAAGCAATTCTAAAGATGGCTATCTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGCTTTACCGAAGGCAGTAAGCAATTCTAAAGATGGCTATCTCTA  750

seq1  TCAACTATCCCACCAGAAAATAAAAGAACAATGACGGTCATCTGGAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTATCCCACCAGAAAATAAAAGAACAATGACGGTCATCTGGAAAAA  800

seq1  AAATGAATTTAAAAAGGTCAGCTCACCAAAATGAAGCAGAAAGAAAAGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATTTAAAAAGGTCAGCTCACCAAAATGAAGCAGAAAGAAAAGCT  850

seq1  AACTAAATTGAGAACTGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAATTGAGAACTGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  900

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACCAAAATCTTTATAATGG  950
      |||||||||||||||||||||| |||||   |||  ||||||||| ||||
seq2  AGAGAGAGAGAGAGAGAGAGAGTGAGAG-TTACCCTAATCTTTAT-ATGG  948

seq1  AGATGACATGAATAGGCAGAAGAAATAATGTGTACAGAGCATTAAGTCTT  1000
      ||||||||||||||||||| ||||||||||||||||||||||| ||||| 
seq2  AGATGACATGAATAGGCAG-AGAAATAATGTGTACAGAGCATT-AGTCTC  996

seq1  CAGTATA-CAAAT-AAAATGCTG-ATTTTTTTCAG-GCTCTGTGGTTATG  1046
      ||||||| ||||| ||||||||| ||||| |||||  |||||||     |
seq2  CAGTATACCAAATAAAAATGCTGAATTTTCTTCAGCCCTCTGTGCAATGG  1046

seq1  AATATAGTGCTGAAAATTTAAAACAAAATGCAAAAGTGAAACACAATTGC  1096
      |||||||||||| || || |||||  |||||  ||||| ||| |||||||
seq2  AATATAGTGCTG-AACTTGAAAAC-CAATGC--AAGTG-AACGCAATTGC  1091

seq1  ATA-CATTAGGACTCT-TCTCTAAGCTCC  1123
       || |||||||||||| ||||||||||||
seq2  CTACCATTAGGACTCTCTCTCTAAGCTCC  1120