BAC Information

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BAC

Clone NameB6Ng01-304F03
Chromosome15 (Build37)
Map Location 101,011,665 - 101,114,856
singlet/doubletdoublet
Overlap geneAcvr1b, Grasp, Nr4a1, 9430023L20Rik
Upstream geneDip2b, Atf1, 4930478A21Rik, EG432981, Mettl7a, ENSMUSG00000058057, LOC554292, Ubie, Yghl1-4, Slc11a2, EG432982, Letmd1, BC035295, Tcfcp2, Pou6f1, Dazap2, BC004728, Bin2, Ela1, Galnt6, Slc4a8, Scn8a, EG668225, Ankrd33, Acvrl1
Downstream gene6030408B16Rik, Krt80, Krt7, Krt85, Krt83, 1700011A15Rik, 5430421N21Rik, EG574415, Krt84, Krt82, 4732456N10Rik, Krt75, EG432985, EG432986, EG406223, EG432987, Krt6b, Krt6a, Krt5, Krt71, Krt74, Krt72, Krt73, Krt2, LOC100043001, Krt1, Krt77, Krt76, Krt4, Krt79, Krt78, Krt8, Krt18, LOC676882, Eif4b, Tenc1, Spryd3, Igfbp6, Soat2, Csad, Zfp740, Itgb7, Rarg, D15Mgi27
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304F03.bB6Ng01-304F03.g
ACCGA097907GA097908
length1,1201,114
definitionB6Ng01-304F03.b B6Ng01-304F03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,113,733 - 101,114,856)(101,011,665 - 101,012,767)
sequence
gaattctgaccggaccggacgtcaggatcgctgcccgcgacctcgcgccg
tctcgggacagcagtgcagacgacgaggaccgagtccagaccctacagac
gccggtccaggcctccgcttcctctgcctgagcggcgcgcgggccggaag
ttttgcccgttcggagggtggaaccggaaggaaccatccgcgcccacggc
gggtgctggccaggctcggctcgacccagccggacgccgctgcagccacg
acatcaggaagctcgcacgagctatatactctctcataatgccacgtaac
tttagtacttgggtgttttttcttgtttgtccttcgggccctaggctcgt
taagaggaaccccccctcctttggacgagtccattcactcccaccaccga
gaacgttgtttgggctgggacaactcacttccgccatcgagacgagaggg
acagaggggacggatggactctgcgctgcccctggtggccaggcggagtc
ggcggcggagagccctcccctgcgacccattgtgggggcccccattcgga
gctgacaaccttaagacaagagagatcccgagatcaaggccataacatct
gagaggcgcctggggatgagcgcacgccggtgtgctgtaggatactgagc
ggatggtgaatctgtgttggcccaaagtgcacaacagtccgggttcactg
aactcagacccacaggaagattttgaaaagggagcttagtctccctgagt
taccttcatacagaagcactacctgatgttgtgtcatgaccgagcaggtg
gcagtcttgtctttaacgattgcgcggttgctcctctaacgttacttatc
ctttccgaatccccatataaacagggagctactgtgaggaatcacaagcg
atacttttgtgatctataaggcgccctataaatataaatgaagtgttcct
gctgaataatctctcggagcgtttttagttgtctatttgttgataagccc
agagcgcaacaggtttgttcagttgcttttagcgcctaagaagcgcgcac
atcctacttcaacaggggcacctcctgagttgtttacgtgagcattaaca
tgcgtgaattcaaacacatt
gaattccagtggaactgcaggggttcaaaccttctcattcaccgggtgat
ggtggcaataaaagccaccaataaaagtctaatctgctggaagtgcagct
tcctcggcacaatgcctctagcctttgagacctccttgtttctcagcctc
agcactgagggtggagggagcttaggcagtggccagcgcctggtgctctg
actgctggggtctgctgggttctaaccctgcagtcacctctggctccctc
ccctgcagggttttactgtggacgtgcactcgctctgtctcctctgtccc
ctctgtccctccctgttgctttcctatgtttccagggtcagctctaggcc
tccaggtttgcatggtcagtcagatgtggccctgctcttgggcttcttgc
tgccccttgtctcttgccggccgggaccttggcactgttgctggcctttc
agtgtgggcccaggatgccttgtgtttttcatggccccatgccttccctg
ttctttctggtaagcttcctccctcctcccctcctcagtactgtgaccca
ggggattttatacttctgtgttttcccatggtcagcagtcagcagtgcac
cttctcctgtgagagtgctggaggctcacatcacttaaggttttgttcct
gcattcagacaacaggtccttgagctagacatcgaacctttgtgtatttt
aagtgcttatatacatttgattaattgaactcatttttccatcctcttgg
caaaatcctaggcaaataattccaattttgtctttctgtgattttttttt
tgaaaatatatatttttacttttttaaagtatgggtgttttgactgcatg
tatgtatatgtactgcacgagtgttagagaccaagaagaaggtcgttgga
tcccctgggaaccagagttaatggatggtttgtgagctgccacgtgggtg
ctaggaagcaaatgcaagtccttctctggctgagcagccaggcttcctcg
ctgtagcatgagactgctcttctggccctgtgttggtatttgtttctttt
taaatcccaagtcactatgatattttttagttaccttgacatatctcctc
tttggtttcgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_101113733_101114856
seq2: B6Ng01-304F03.b_46_1165 (reverse)

seq1  AATGTGTTTGGAAATCACGCATGTTAATGCTCACGTTAAACAACTCAGGA  50
      ||||||||| ||| ||||||||||||||||||||| ||||||||||||||
seq2  AATGTGTTT-GAATTCACGCATGTTAATGCTCACG-TAAACAACTCAGGA  48

seq1  GTGCCCCCTGTTGAAAGTTAGGGATGTGCGCGCTCTTTAGGCGCTAAAAG  100
      |   ||||||||| ||||   |||||||||||||  ||||||||||||||
seq2  GGTGCCCCTGTTG-AAGT--AGGATGTGCGCGCTTCTTAGGCGCTAAAAG  95

seq1  CAACTGACCAAACCTG-TGCGCTCTGGGCTTATCAACAAATAGACAACTA  149
      ||||||| |||||||| |||||||||||||||||||||||||||||||||
seq2  CAACTGAACAAACCTGTTGCGCTCTGGGCTTATCAACAAATAGACAACTA  145

seq1  AAAACGCTCCGAGAGATTATTCAGCAGGAACACTTCATTTATATTTATAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACGCTCCGAGAGATTATTCAGCAGGAACACTTCATTTATATTTATAG  195

seq1  GGCGCCTTATAGATCACAAAAGTATCGCTTGTGATTCCTCACAGTAGCTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCCTTATAGATCACAAAAGTATCGCTTGTGATTCCTCACAGTAGCTC  245

seq1  CCTGTTTATATGGGGATTCGGAAAGGATAAGTAACGTTAGAGGAGCAACC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTATATGGGGATTCGGAAAGGATAAGTAACGTTAGAGGAGCAACC  295

seq1  GCGCAATCGTTAAAGACAAGACTGCCACCTGCTCGGTCATGACACAACAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCAATCGTTAAAGACAAGACTGCCACCTGCTCGGTCATGACACAACAT  345

seq1  CAGGTAGTGCTTCTGTATGAAGGTAACTCAGGGAGACTAAGCTCCCTTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAGTGCTTCTGTATGAAGGTAACTCAGGGAGACTAAGCTCCCTTTT  395

seq1  CAAAATCTTCCTGTGGGTCTGAGTTCAGTGAACCCGGACTGTTGTGCACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCTTCCTGTGGGTCTGAGTTCAGTGAACCCGGACTGTTGTGCACT  445

seq1  TTGGGCCAACACAGATTCACCATCCGCTCAGTATCCTACAGCACACCGGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCCAACACAGATTCACCATCCGCTCAGTATCCTACAGCACACCGGC  495

seq1  GTGCGCTCATCCCCAGGCGCCTCTCAGATGTTATGGCCTTGATCTCGGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGCTCATCCCCAGGCGCCTCTCAGATGTTATGGCCTTGATCTCGGGA  545

seq1  TCTCTCTTGTCTTAAGGTTGTCAGCTCCGAATGGGGGCCCCCACAATGGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTTGTCTTAAGGTTGTCAGCTCCGAATGGGGGCCCCCACAATGGG  595

seq1  TCGCAGGGGAGGGCTCTCCGCCGCCGACTCCGCCTGGCCACCAGGGGCAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAGGGGAGGGCTCTCCGCCGCCGACTCCGCCTGGCCACCAGGGGCAG  645

seq1  CGCAGAGTCCATCCGTCCCCTCTGTCCCTCTCGTCTCGATGGCGGAAGTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGAGTCCATCCGTCCCCTCTGTCCCTCTCGTCTCGATGGCGGAAGTG  695

seq1  AGTTGTCCCAGCCCAAACAACGTTCTCGGTGGTGGGAGTGAATGGACTCG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTCCCAGCCCAAACAACGTTCTCGGTGGTGGGAGTGAATGGACTCG  745

seq1  TCCAAAGGAGGGGGGGTTCCTCTTAACGAGCCTAGGGCCCGAAGGACAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGGAGGGGGGGTTCCTCTTAACGAGCCTAGGGCCCGAAGGACAAA  795

seq1  CAAGAAAAAACACCCAAGTACTAAAGTTACGTGGCATTATGAGAGAGTAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAAAACACCCAAGTACTAAAGTTACGTGGCATTATGAGAGAGTAT  845

seq1  ATAGCTCGTGCGAGCTTCCTGATGTCGTGGCTGCAGCGGCGTCCGGCTGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTCGTGCGAGCTTCCTGATGTCGTGGCTGCAGCGGCGTCCGGCTGG  895

seq1  GTCGAGCCGAGCCTGGCCAGCACCCGCCGTGGGCGCGGATGGTTCCTTCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGAGCCGAGCCTGGCCAGCACCCGCCGTGGGCGCGGATGGTTCCTTCC  945

seq1  GGTTCCACCCTCCGAACGGGCAAAACTTCCGGCCCGCGCGCCGCTCAGGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCACCCTCCGAACGGGCAAAACTTCCGGCCCGCGCGCCGCTCAGGC  995

seq1  AGAGGAAGCGGAGGCCTGGACCGGCGTCTGTAGGGTCTGGACTCGGTCCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAGCGGAGGCCTGGACCGGCGTCTGTAGGGTCTGGACTCGGTCCT  1045

seq1  CGTCGTCTGCACTGCTGTCCCGAGACGGCGCGAGGTCGCGGGCAGCGATC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCGTCTGCACTGCTGTCCCGAGACGGCGCGAGGTCGCGGGCAGCGATC  1095

seq1  CTGACGTCCGGTCCGGTCAGAATTC  1124
      |||||||||||||||||||||||||
seq2  CTGACGTCCGGTCCGGTCAGAATTC  1120

seq1: chr15_101011665_101012767
seq2: B6Ng01-304F03.g_68_1181

seq1  GAATTCCAGTGGAACTGCAGGGGTTCAAACCTTCTCATTCACCGGGTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTGGAACTGCAGGGGTTCAAACCTTCTCATTCACCGGGTGAT  50

seq1  GGTGGCAATAAAAGCCACCAATAAAAGTCTAATCTGCTGGAAGTGCAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCAATAAAAGCCACCAATAAAAGTCTAATCTGCTGGAAGTGCAGCT  100

seq1  TCCTCGGCACAATGCCTCTAGCCTTTGAGACCTCCTTGTTTCTCAGCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCGGCACAATGCCTCTAGCCTTTGAGACCTCCTTGTTTCTCAGCCTC  150

seq1  AGCACTGAGGGTGGAGGGAGCTTAGGCAGTGGCCAGCGCCTGGTGCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGAGGGTGGAGGGAGCTTAGGCAGTGGCCAGCGCCTGGTGCTCTG  200

seq1  ACTGCTGGGGTCTGCTGGGTTCTAACCCTGCAGTCACCTCTGGCTCCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGGGGTCTGCTGGGTTCTAACCCTGCAGTCACCTCTGGCTCCCTC  250

seq1  CCCTGCAGGGTTTTACTGTGGACGTGCACTCGCTCTGTCTCCTCTGTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCAGGGTTTTACTGTGGACGTGCACTCGCTCTGTCTCCTCTGTCCC  300

seq1  CTCTGTCCCTCCCTGTTGCTTTCCTATGTTTCCAGGGTCAGCTCTAGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCCCTCCCTGTTGCTTTCCTATGTTTCCAGGGTCAGCTCTAGGCC  350

seq1  TCCAGGTTTGCATGGTCAGTCAGATGTGGCCCTGCTCTTGGGCTTCTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTTTGCATGGTCAGTCAGATGTGGCCCTGCTCTTGGGCTTCTTGC  400

seq1  TGCCCCTTGTCTCTTGCCGGCCGGGACCTTGGCACTGTTGCTGGCCTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCTTGTCTCTTGCCGGCCGGGACCTTGGCACTGTTGCTGGCCTTTC  450

seq1  AGTGTGGGCCCAGGATGCCTTGTGTTTTTCATGGCCCCATGCCTTCCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGGCCCAGGATGCCTTGTGTTTTTCATGGCCCCATGCCTTCCCTG  500

seq1  TTCTTTCTGGTAAGCTTCCTCCCTCCTCCCCTCCTCAGTACTGTGACCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTGGTAAGCTTCCTCCCTCCTCCCCTCCTCAGTACTGTGACCCA  550

seq1  GGGGATTTTATACTTCTGTGTTTTCCCATGGTCAGCAGTCAGCAGTGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATTTTATACTTCTGTGTTTTCCCATGGTCAGCAGTCAGCAGTGCAC  600

seq1  CTTCTCCTGTGAGAGTGCTGGAGGCTCACATCACTTAAGGTTTTGTTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCTGTGAGAGTGCTGGAGGCTCACATCACTTAAGGTTTTGTTCCT  650

seq1  GCATTCAGACAACAGGTCCTTGAGCTAGACATCGAACC-TTGTGTATTTT  699
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCATTCAGACAACAGGTCCTTGAGCTAGACATCGAACCTTTGTGTATTTT  700

seq1  AAGTGCTTATATACATTTGATTAATTGAACTCATTTTTCCATCCTCTTGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTTATATACATTTGATTAATTGAACTCATTTTTCCATCCTCTTGG  750

seq1  CAAAATCCTAGGCAAATAATTCCAATTTTGTCTTTCTGTGA-TTTTTTTT  798
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CAAAATCCTAGGCAAATAATTCCAATTTTGTCTTTCTGTGATTTTTTTTT  800

seq1  TGAAAATATATATTTTTAC-TTTTTAAAGTATGGGTGTTTTGACTGCATG  847
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGAAAATATATATTTTTACTTTTTTAAAGTATGGGTGTTTTGACTGCATG  850

seq1  TATGTATATGTACTGCACGAGTGTTAGAGACC-AGAAG-AGGTCGTTGGA  895
      |||||||||||||||||||||||||||||||| ||||| |||||||||||
seq2  TATGTATATGTACTGCACGAGTGTTAGAGACCAAGAAGAAGGTCGTTGGA  900

seq1  TCCCCT-GGAACCAGAG-TAATGGATGG-TTGTGAGCTGCCACGTGGGTG  942
      |||||| |||||||||| |||||||||| |||||||||||||||||||||
seq2  TCCCCTGGGAACCAGAGTTAATGGATGGTTTGTGAGCTGCCACGTGGGTG  950

seq1  CTAGGAAGCAAATGCAAGTCCTTCTCT-GCTGAGCAGCCAGGGCTCCTCC  991
      ||||||||||||||||||||||||||| ||||||||||||||  |||| |
seq2  CTAGGAAGCAAATGCAAGTCCTTCTCTGGCTGAGCAGCCAGGCTTCCT-C  999

seq1  GCTG-AGCCTGAGCCGGCTCTCCT-GCCCTGTGTT-GTATTTTGTTC-TT  1037
      |||| ||| |||| | ||||| || |||||||||| ||||||  ||| ||
seq2  GCTGTAGCATGAGACTGCTCTTCTGGCCCTGTGTTGGTATTTGTTTCTTT  1049

seq1  TTAAATCCC-AGTCACTATGGATATTTTTTAGTTACTTGGACATAATCT-  1085
      ||||||||| ||||||||| |||||||||||||||| | ||||| |||| 
seq2  TTAAATCCCAAGTCACTAT-GATATTTTTTAGTTACCTTGACAT-ATCTC  1097

seq1  CTCTTTGGTTTCTGTGTG  1103
      |||||||||||| |||||
seq2  CTCTTTGGTTTC-GTGTG  1114