BAC Information

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BAC

Clone NameB6Ng01-304H10
Chromosome15 (Build37)
Map Location 19,615,947 - 19,617,041
singlet/doubletsinglet
Overlap geneLOC621884
Upstream geneCdh10, EG666857, EG666875
Downstream geneLOC100040265, Acot10, LOC100040302
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304H10.bB6Ng01-304H10.g
ACCGA098014GA098015
length1,1841,102
definitionB6Ng01-304H10.b B6Ng01-304H10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccatttttaatggggttatttgattt
tctgaagtccaccttcttgagttctttatatatgttggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacggtgtcttttgccttgcagaaactttggagtttcat
taggtcacatttgtcaattctcgatcttacagcacaagccattgctgttc
tgttaggaatttttcccctgtgcccatatcttcaaggcttttccccactg
tctcctctataagtttcagtgtctctggttttatgtgaagttccttgatc
cacttagatttgaccttagtacaaggagataagtatggatcgattcgcat
tcttctacacgataacaaccagttgtgccagcaccaaatgttgaaaatgc
tgtctttctaccatggatggttttagctcccttgtcgaagatcaagtgac
cataggtgtgtgggttcatttctgggtcttcaattctattccattggtct
ccttgtctgtctctataccagtaccatgcagtttttatcacaattgctct
gtagtaaagctttaggtctggcatggtgattctgccagaagttcttttat
ccttgagaagactttttgctatcctaggttttttgttattccagacaaat
ttgcaaattgctccttccaattcgttgaagaattgagttggaattttgat
ggggattgcattgaatctgtcgattgcttttggcaagattgccattttta
caatgttgatcctgccaatccatgagcatgggagatctttccatcttctg
agatcttccttaatttctttcttcagagattgaagtttttatcatacaga
tctttcactttcttagttagagtcacgccaagatatttttatattatttg
tgactattgagaagggtgttgtttcctaattcttctcagcctgttaatct
ttgtgtagagaaagcattgactgtttgagttaatttttatatcagcttac
tcaccgaagctgttatcaggtttaggagtctctgatgaattttaaggttc
acttaaattacctatcaattcgatctgctaaggtggatatatgggacttc
tctcgtttcagtatgtaataccccctggaaatct
gaattccaatactagccagggaagtgttctgaatgataccagtgtcttgc
aaaaggtagctacaaatggtgcaggtgtgttgtattcctccaaacgtggg
cattcacaggtatgcttctttgaagtggctttagaactcagacattaaga
tagacagtctccaaggaaatgaaagcaagaacttgtgggcagttggagga
caaaaaaagcagagtcccagcagaaaacatcagggaagaaatgctaatac
actgggtagaaaaggacactgaaaggtggctctgatttggaagacaaaag
tagaaatttgtgggctttttatcaaggtgtcttcactacatgtgaaagaa
ttcatccagaggacacagccaaaggacaacaacaacataaaaacaaacaa
caaacaagtaagttatcagcttctgagaaactaaagatgcaatccatatc
tgactatttaagatgtgagtgaacacctgaattaaaatccctcacattca
gaacttcagagaactataacatggtgataagaaaggagctatggatcaac
aggccaaagactgcaggaattccttactttcgtagacttctctttcatgt
tacactgatcaaggttctctgccaatcctaaactaagaaaagtgcaaggt
ggcagttttcccccacagaatatgatggctttagggtagggcagttttgt
tttcttttctcttctctatcatatttgtatattcttcacattatttgcat
ctctttcattattatgtcatctgtttcacagacctgtaaaaagatgtaaa
gtttgcttagtcagcttaaataatttgaggccctatgatgtttgcttatc
tttaatgagttttttttattttttttattacatattttcctcaactacat
ttccaatgctatcccaaaagtcctttcataccctccccccacttccctac
cccacccattcccattttttaacttaataattttaatgattttattttct
ccttcagagctataccattaaaaagatgcccaaatgctgactacaatccc
tcagaacagattcttaggtgctcaggtgaataaactgagataagttactc
ag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_19615947_19617041
seq2: B6Ng01-304H10.g_67_1168 (reverse)

seq1  CTGAGT-ACTTATTTCAGTTTTATTCACTTGAGCA-CTAAGAATCTGTTC  48
      |||||| |||||| |||| ||||||||| |||||| ||||||||||||||
seq2  CTGAGTAACTTATCTCAG-TTTATTCACCTGAGCACCTAAGAATCTGTTC  49

seq1  TGA-GGATTGTTAGTCAGCATTTTGGGCATCTTTTTAATGGTATAGCTCT  97
      ||| |||||| ||||||||| |||||||||||||||||||||||||||||
seq2  TGAGGGATTG-TAGTCAGCA-TTTGGGCATCTTTTTAATGGTATAGCTCT  97

seq1  GAAGGAGAAA--TAAATCATTAAAA-TATTAAGTTAAAAAATGGGAATGG  144
      ||||||||||   |||||||||||| ||||||||||||||||||||||||
seq2  GAAGGAGAAAATAAAATCATTAAAATTATTAAGTTAAAAAATGGGAATGG  147

seq1  GT-GGGTAGGGAAGTGGGGGGAGGGTATG-AAGGACTTTTGGGATAGCAT  192
      || |||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTGGGGTAGGGAAGTGGGGGGAGGGTATGAAAGGACTTTTGGGATAGCAT  197

seq1  TGGAAATGTAGTTGAGGAAAATATGTAATAAAAAAA--TAAAAAAACTCA  240
      ||||||||||||||||||||||||||||||||||||   |||||||||||
seq2  TGGAAATGTAGTTGAGGAAAATATGTAATAAAAAAAATAAAAAAAACTCA  247

seq1  TTAAAGATAAGCAAACATCATAGGGCCTCAAATTATTTAAGCTGACTAAG  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGATAAGCAAACATCATAGGGCCTCAAATTATTTAAGCTGACTAAG  297

seq1  CAAACTTTACATCTTTTTACAGGTCTGTGAAACAGATGACATAATAATGA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTTACATCTTTTTACAGGTCTGTGAAACAGATGACATAATAATGA  347

seq1  AAGAGATGCAAATAATGTGAAGAATATACAAATATGATAGAGAAGAGAAA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATGCAAATAATGTGAAGAATATACAAATATGATAGAGAAGAGAAA  397

seq1  AGAAAACAAAACTGCCCTACCCTAAAGCCATCATATTCTGTGGGGGAAAA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACAAAACTGCCCTACCCTAAAGCCATCATATTCTGTGGGGGAAAA  447

seq1  CTGCCACCTTGCACTTTTCTTAGTTTAGGATTGGCAGAGAACCTTGATCA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACCTTGCACTTTTCTTAGTTTAGGATTGGCAGAGAACCTTGATCA  497

seq1  GTGTAACATGAAAGAGAAGTCTACGAAAGTAAGGAATTCCTGCAGTCTTT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAACATGAAAGAGAAGTCTACGAAAGTAAGGAATTCCTGCAGTCTTT  547

seq1  GGCCTGTTGATCCATAGCTCCTTTCTTATCACCATGTTATAGTTCTCTGA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGTTGATCCATAGCTCCTTTCTTATCACCATGTTATAGTTCTCTGA  597

seq1  AGTTCTGAATGTGAGGGATTTTAATTCAGGTGTTCACTCACATCTTAAAT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGAATGTGAGGGATTTTAATTCAGGTGTTCACTCACATCTTAAAT  647

seq1  AGTCAGATATGGATTGCATCTTTAGTTTCTCAGAAGCTGATAACTTACTT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGATATGGATTGCATCTTTAGTTTCTCAGAAGCTGATAACTTACTT  697

seq1  GTTTGTTGTTTGTTTTTATGTTGTTGTTGTCCTTTGGCTGTGTCCTCTGG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTGTTTGTTTTTATGTTGTTGTTGTCCTTTGGCTGTGTCCTCTGG  747

seq1  ATGAATTCTTTCACATGTAGTGAAGACACCTTGATAAAAAGCCCACAAAT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTCTTTCACATGTAGTGAAGACACCTTGATAAAAAGCCCACAAAT  797

seq1  TTCTACTTTTGTCTTCCAAATCAGAGCCACCTTTCAGTGTCCTTTTCTAC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTTTTGTCTTCCAAATCAGAGCCACCTTTCAGTGTCCTTTTCTAC  847

seq1  CCAGTGTATTAGCATTTCTTCCCTGATGTTTTCTGCTGGGACTCTGCTTT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGTATTAGCATTTCTTCCCTGATGTTTTCTGCTGGGACTCTGCTTT  897

seq1  TTTTGTCCTCCAACTGCCCACAAGTTCTTGCTTTCATTTCCTTGGAGACT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCCTCCAACTGCCCACAAGTTCTTGCTTTCATTTCCTTGGAGACT  947

seq1  GTCTATCTTAATGTCTGAGTTCTAAAGCCACTTCAAAGAAGCATACCTGT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATCTTAATGTCTGAGTTCTAAAGCCACTTCAAAGAAGCATACCTGT  997

seq1  GAATGCCCACGTTTGGAGGAATACAACACACCTGCACCATTTGTAGCTAC  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCCCACGTTTGGAGGAATACAACACACCTGCACCATTTGTAGCTAC  1047

seq1  CTTTTGCAAGACACTGGTATCATTCAGAACACTTCCCTGGCTAGTATTGG  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCAAGACACTGGTATCATTCAGAACACTTCCCTGGCTAGTATTGG  1097

seq1  AATTC  1095
      |||||
seq2  AATTC  1102