BAC Information

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BAC

Clone NameB6Ng01-305E15
Chromosome15 (Build37)
Map Location 24,468,356 - 24,469,537
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666989
Downstream geneLOC666999, LOC100040492, LOC100040499, LOC100040529, 9230109A22Rik, 4930445E18Rik, Basp1, EG432939, LOC100040583
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305E15.bB6Ng01-305E15.g
ACCGA098617GA098618
length1,1971,207
definitionB6Ng01-305E15.b B6Ng01-305E15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttacccattatgtgactcctggacacaagactgtagggccctt
tgatgaataattgacctgtgtagggcttcacttaaggatgagtaattcac
tttatttagtggttctgggcatgtaatgtgagtcaaaattaaatggtgat
taggggactgtgactctcttcacaatttcattcaggctcttgttcatttg
aaatgagcatttctactactgcagaaccaatgagaatgtagttaatttta
cattgattttctagactgataattacctagcttatgttataggtctgcat
caatcaagtagactattttgatcataatttttaaatactttccatttgga
tagctctgttcattttacttttagcaatggagagtaactacttgtacctt
gccagtctaggatctaaaaattcacactgggtttagattttacagttgag
taaggaacttaatatatggacacacagaagaagattccctttcaaatcat
caaaactaccatatgtgtgtgtatacacacacacacacacacacacacac
acacacacatatgtacatgtatatatatatatatatatatatatatatat
atatatgctaaaattaaataagcaaccttaggaaatggttactaataacc
ataataaatcacattttgttgaatggtgtgtcaaaagacaaagatgagtt
aagtatttaaatccctaagttcgacttcagataagtgggctagaagcttc
tgggtttgcccacagtgagattctatctccttatagcttcatttaattgt
caacaataatacaccatgaagaaattggtatgaatatgctatttctgtcc
ccttttctctctaattctcaaatttagttgcactgttctcactattctcc
tcttatcaagatgctttgaggagccacattatgacttctgcttggcatat
ctgagttcccaacatctactaatgaactttgtagccattaacaaaataga
gactgctggacacatggatagttaaaatcgttatggtttatctggataac
agggaataccgtcccaagaaagcaatagaacaagagtgcctgtagaaatt
caaccttttaccttaagagtggaggcctcatggaaaaatgttatgtgaat
ttatccacggaatttttattttaaatatctctttggccttggtctgt

gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaacaccgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctgtggaggatgtggagaaagaggaacactcccttattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggtttctca
gaaaattggacatagtactaccgggggatcccacaatacctctcctgggc
atatatccagaagatatcccaaccggtaagaggaacacatgctccactat
gttcatagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gaatactactcagctatttaaaaaaaatgaatttatgaagtttctaggca
gatggatggacctggagggtatcatcctgagtggggttacccaatcacaa
aggaacttgcacaatatttactcactgataagtggataatagcccagaaa
cataagatacccaagatataagatacaacttgccaaacgcatgaaattca
agaagaacgaagaccaaagtgtggacactttaccctttcttagaaacggg
aacaaaacacccatagaaggagttacagagacaaaatttggagctgtgac
aaaaggatggaccatctagtgattgccatatgcaggaatccatcgcataa
tcagcttccaaatgctgacaccattgcatacactagcaagattttgctga
aaggacccagatatagctgtctcttgtgagactatgccggggcctagcaa
atacaaaattgggatgctcacagtcagctatcggatgggttcatacggcc
cctaatggagaagctaagagaatttacccaagaggctaaagggaactgca
accctataggtggaacaacaatattgacctaacccagttacctgggagct
cttgtcttagctgccatatgtatatcaaagatgccttaggcggccatacc
actggaaagagatgtgtccatttgactgcaaactttattatggccagtta
cgaaggacgtcaaggccaaaaaggggtgagtgggaccggatagtgtggaa
ttgttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_24468356_24469537
seq2: B6Ng01-305E15.b_44_1240

seq1  GAATTCTTTACCCATTATGTGACTCCTGGACACAAGACTGTAGGGCCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTACCCATTATGTGACTCCTGGACACAAGACTGTAGGGCCCTT  50

seq1  TGATGAATAATTGACCTGTGTAGGGCTTCACTTAAGGATGAGTAATTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAATAATTGACCTGTGTAGGGCTTCACTTAAGGATGAGTAATTCAC  100

seq1  TTTATTTAGTGGTTCTGGGCATGTAATGTGAGTCAAAATTAAATGGTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAGTGGTTCTGGGCATGTAATGTGAGTCAAAATTAAATGGTGAT  150

seq1  TAGGGGACTGTGACTCTCTTCACAATTTCATTCAGGCTCTTGTTCATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGACTGTGACTCTCTTCACAATTTCATTCAGGCTCTTGTTCATTTG  200

seq1  AAATGAGCATTTCTACTACTGCAGAACCAATGAGAATGTAGTTAATTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGCATTTCTACTACTGCAGAACCAATGAGAATGTAGTTAATTTTA  250

seq1  CATTGATTTTCTAGACTGATAATTACCTAGCTTATGTTATAGGTCTGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATTTTCTAGACTGATAATTACCTAGCTTATGTTATAGGTCTGCAT  300

seq1  CAATCAAGTAGACTATTTTGATCATAATTTTTAAATACTTTCCATTTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAAGTAGACTATTTTGATCATAATTTTTAAATACTTTCCATTTGGA  350

seq1  TAGCTCTGTTCATTTTACTTTTAGCAATGGAGAGTAACTACTTGTACCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTGTTCATTTTACTTTTAGCAATGGAGAGTAACTACTTGTACCTT  400

seq1  GCCAGTCTAGGATCTAAAAATTCACACTGGGTTTAGATTTTACAGTTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTCTAGGATCTAAAAATTCACACTGGGTTTAGATTTTACAGTTGAG  450

seq1  TAAGGAACTTAATATATGGACACACAGAAGAAGATTCCCTTTCAAATCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAACTTAATATATGGACACACAGAAGAAGATTCCCTTTCAAATCAT  500

seq1  CAAAACTACCATATGTGTGTGTATACACACACACACACACACACACACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTACCATATGTGTGTGTATACACACACACACACACACACACACAC  550

seq1  ACACACACATATGTACATGTATATATATATATATATATATATATATATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACATATGTACATGTATATATATATATATATATATATATATATAT  600

seq1  ATATATGCTAAAATTAAATAAGCAACCTTAGGAAATGGTTACTAATAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGCTAAAATTAAATAAGCAACCTTAGGAAATGGTTACTAATAACC  650

seq1  ATAATAAATCACATTTTGTTGAATGGTGTGTCAAAAGACAAAGATGAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAATCACATTTTGTTGAATGGTGTGTCAAAAGACAAAGATGAGTT  700

seq1  AAGTATTTAAATCCCTAAGTTCGACTTCAGATAAGTGGGCTAGAAGCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTTAAATCCCTAAGTTCGACTTCAGATAAGTGGGCTAGAAGCTTC  750

seq1  TGGGTTTGCCCACAGTGAGATTCTATCTCCTTATAGCTTCATTTAATTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTGCCCACAGTGAGATTCTATCTCCTTATAGCTTCATTTAATTGT  800

seq1  CAACAATAATACACCATGAAGAAATTGGTATGAATATGCTATTTCTGTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAATAATACACCATGAAGAAATTGGTATGAATATGCTATTTCTGTCC  850

seq1  CCTTTTCTCTCTAATTCTCAAATTTAGTTGCACTGTTCTCACTATTCTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCTCTCTAATTCTCAAATTTAGTTGCACTGTTCTCACTATTCTCC  900

seq1  TCTTATCAAGATGCTTTGAGGAGCCACATTATGACTTCTGCTTGGCATAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATCAAGATGCTTTGAGGAGCCACATTATGACTTCTGCTTGGCATAT  950

seq1  CTGAGTTTCCAACATCTACTAATGAACTTTGTAGCCATTAACAAAATAAG  1000
      ||||||| ||||||||||||||||||||||||||||||||||||||| ||
seq2  CTGAGTTCCCAACATCTACTAATGAACTTTGTAGCCATTAACAAAAT-AG  999

seq1  AGACTGCTGAACACATTGATAGTT-AAATCGTAATGGTTAATCT-GAT-A  1047
      ||||||||| |||||| ||||||| ||||||| |||||| |||| ||| |
seq2  AGACTGCTGGACACATGGATAGTTAAAATCGTTATGGTTTATCTGGATAA  1049

seq1  CAGGG-ATAACGTCCC-AGGAAGC-ATAGAAC-AGAGTG-CTGTAAGAAT  1092
      ||||| ||| |||||| || |||| ||||||| |||||| |||||  |||
seq2  CAGGGAATACCGTCCCAAGAAAGCAATAGAACAAGAGTGCCTGTAGAAAT  1099

seq1  TCATAC-TTTAACTTAAGAGT-GAGGCTCAATG--AAAATG-TATG---A  1134
      |||  | |||| ||||||||| |||||   |||  |||||| ||||   |
seq2  TCAACCTTTTACCTTAAGAGTGGAGGCCTCATGGAAAAATGTTATGTGAA  1149

seq1  GTTATCCACAGAATTTTTATTT--AATA-CT-TTTGGCCTTTGGCTGTCT  1180
       |||||||| ||||||||||||  |||| || ||||||||| | ||||  
seq2  TTTATCCACGGAATTTTTATTTTAAATATCTCTTTGGCCTTGGTCTGT--  1197

seq1  GT  1182
        
seq2  --  1197


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