BAC Information

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BAC

Clone NameB6Ng01-305G14
Chromosome15 (Build37)
Map Location 4,738,525 - 4,858,057
singlet/doubletdoublet
Overlap geneC6, LOC100039214, 4930455B06Rik
Upstream geneFbxo4, AW549877, LOC100039196, Oxct1, Plcxd3
Downstream geneC7, Card6, Rpl37, LOC100039281, Prkaa1, Ttc33, Ptger4, LOC100039322, LOC100039308, LOC666291, LOC666319
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305G14.bB6Ng01-305G14.g
ACCGA098709GA098710
length1,2141,097
definitionB6Ng01-305G14.b B6Ng01-305G14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(4,738,525 - 4,739,728)(4,856,971 - 4,858,057)
sequence
gaattctttcttcatatgcaagtatttctcctattctataccatctcact
tgagaatttctgacagtaatgacatgcctaaattttactggaagtctaga
gcagtggctctcaggcttcataatgctgtgaccctctaatagagttcttc
atgttgtggtgactcccaggcataaaattacttttgtcacttcataactg
caattttgctgctgttatgaattgtaatgtgaatatctgtgggttttttt
tttttatgatcttaggcaatccctctgaaagggtcattcgatgcccaaag
ggcatgacccaaaggttgaaaatctgtagagacctgggtaatgctactga
ctctcagtcatatctctggttgtcattcggtctatttcattccccatcca
tgttggtaattttaagtctataaacattccatcatgttttttcttggtct
ggaatttctaagtttctagcatagcagtaaaaggtacatggtttgtgtta
ctccacagactccaaacataggggagtataaatccaaagctaggtctgct
tcaaatcaagagaagagcagttggaaaatagggtacgtgtacattccact
gctgcctgttgctaactatgcatttcaaaacaaattgcttgcagcttcag
tatccgcagtggcagtaatatctacttagcatcgccctgacaattatgta
ggataatgtgtgtaaagagcctggtgtgtaccctgtgctgactaaatggc
accgttggcatcgttactgtaatttgagttattaatccccctgtagagat
tttaaaaaatgctctctcacatttttcctccgagcttacttcttggcagg
acctgactgtgctattctacatttgccctcctgagaaaattgacttgtct
ttgaagtatgaatttttcaataaaattaaaatggatcattttcttgaatc
atcttgcaggttcctttttgcaagggatcagaagaaatccatttccctgg
tccagggcgggaggagtcagcaggcagcagcctttggcttgggagaaatg
gcacttcttggtcaagaagggagaatgtcttatttctggagtgctaagga
tccggtgaaggaaaacccttgctgttagttgaattataggtgagacctga
atgttccgtgggtagggtcttcccaggtcatcactaaggtcatgccacaa
ttcccttttcgttt
gaattcagacgcctgccctgccatgtctgacttctgtgtgagtcctggag
atccaaatgaaaggtcatctgacttgtgcaacaagtgctttaccaatatc
tctcatagtcactttctttcaacatattaatgaattaaaaattttcctga
tattataaaataccttgggactccatatttcctcaatattaaataaaacc
ttccattcgtagggaagcttgtaaagacacaggatgggaattaaaacaat
agggtattttaaggggagatgaaacattctttccagaggggaagtctgtt
tttagtgaatacctcaccatctgagatgaaaacctttcactttgcagaga
aggtaatcaagacacaagttgttcatatgaagatgaagcagtaagatgta
agaggaggtgaaacactgtatctttctgaaaagcttattaataagctcag
gaaataaaaaaaaaattagtgccttcaggaagttcctgaaacagacaagg
ttcactaaacccctcttttccccaggcatatagaagcagtaagaatggct
gagagaatttctcagacaagctgaactgcctgaaagaagcagaaaccatc
tgagctgccttgaagaggctcagaataactgagatacctggacagccttc
atcttggtagagccacctgaaggttttgaagcacactataagcttctccc
ttccttgaactgttacccatgttgggatgggctttggtgatgtggctgtc
ttggagtcatttctgctcctgtacctaacccctcacctaaatgcctgtaa
gtacaagaaaacctattggttcaccaagttgaactttggtgggaatttgg
ctctattgtcggtttctctgtcccttgatgagttgatgcttgttccacat
cacacagcattgcacactattttcattggttttccctcacactattcccc
ctacaataatcctactttctttcctccttttccttaaggtaaattggtta
agatgcctttgttcctgaatttccttacttccgcttcttacaaccctgcc
ccttagtccaactgtatacttagttcaattgaacctggggaagaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_4738525_4739728
seq2: B6Ng01-305G14.b_44_1257

seq1  GAATTCTTTCTTCATATGCAAGTATTTCTCCTATTCTATACCATCTCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTCATATGCAAGTATTTCTCCTATTCTATACCATCTCACT  50

seq1  TGAGAATTTCTGACAGTAATGACATGCCTAAATTTTACTGGAAGTCTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATTTCTGACAGTAATGACATGCCTAAATTTTACTGGAAGTCTAGA  100

seq1  GCAGTGGCTCTCAGGCTTCATAATGCTGTGACCCTCTAATAGAGTTCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGGCTCTCAGGCTTCATAATGCTGTGACCCTCTAATAGAGTTCTTC  150

seq1  ATGTTGTGGTGACTCCCAGGCATAAAATTACTTTTGTCACTTCATAACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTGGTGACTCCCAGGCATAAAATTACTTTTGTCACTTCATAACTG  200

seq1  CAATTTTGCTGCTGTTATGAATTGTAATGTGAATATCTGTGGGTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTGCTGCTGTTATGAATTGTAATGTGAATATCTGTGGGTTTTTTT  250

seq1  TTTTTATGATCTTAGGCAATCCCTCTGAAAGGGTCATTCGATGCCCAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATGATCTTAGGCAATCCCTCTGAAAGGGTCATTCGATGCCCAAAG  300

seq1  GGCATGACCCAAAGGTTGAAAATCTGTAGAGACCTGGGTAATGCTACTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGACCCAAAGGTTGAAAATCTGTAGAGACCTGGGTAATGCTACTGA  350

seq1  CTCTCAGTCATATCTCTGGTTGTCATTCGGTCTATTTCATTCCCCATCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGTCATATCTCTGGTTGTCATTCGGTCTATTTCATTCCCCATCCA  400

seq1  TGTTGGTAATTTTAAGTCTATAAACATTCCATCATGTTTTTTCTTGGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTAATTTTAAGTCTATAAACATTCCATCATGTTTTTTCTTGGTCT  450

seq1  GGAATTTCTAAGTTTCTAGCATAGCAGTAAAAGGTACATGGTTTGTGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTCTAAGTTTCTAGCATAGCAGTAAAAGGTACATGGTTTGTGTTA  500

seq1  CTCCACAGACTCCAAACATAGGGGAGTATAAATCCAAAGCTAGGTCTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAGACTCCAAACATAGGGGAGTATAAATCCAAAGCTAGGTCTGCT  550

seq1  TCAAATCAAGAGAAGAGCAGTTGGAAAATAGGGTACGTGTACATTCCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCAAGAGAAGAGCAGTTGGAAAATAGGGTACGTGTACATTCCACT  600

seq1  GCTGCCTGTTGCTAACTATGCATTTCAAAACAAATTGCTTGCAGCTTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCTGTTGCTAACTATGCATTTCAAAACAAATTGCTTGCAGCTTCAG  650

seq1  TATCCGCAGTGGCAGTAATATCTACTTAGCATCGCCCTGACAATTATGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCGCAGTGGCAGTAATATCTACTTAGCATCGCCCTGACAATTATGTA  700

seq1  GGATAATGTGTGTAAAGAGCCTGGTGTGTACCCTGTGCTGACTAAATGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAATGTGTGTAAAGAGCCTGGTGTGTACCCTGTGCTGACTAAATGGC  750

seq1  ACCGTTGGCATCGTTACTGTAATTTGAGTTATTAATCCCCCTGTAGAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTTGGCATCGTTACTGTAATTTGAGTTATTAATCCCCCTGTAGAGAT  800

seq1  TTTAAAAAATGCTCTCTCACA-TTTTCCTCCGAGCTTACTTCTTGGCAGG  849
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTTAAAAAATGCTCTCTCACATTTTTCCTCCGAGCTTACTTCTTGGCAGG  850

seq1  ACCTGACTGTGCTA-TCTACA-TTGCCCTCCTGAGAAAATTGACTTGTCT  897
      |||||||||||||| |||||| ||||||||||||||||||||||||||||
seq2  ACCTGACTGTGCTATTCTACATTTGCCCTCCTGAGAAAATTGACTTGTCT  900

seq1  TTGAAGTATGAA-TTTTCAATAAAATT-AAATGGATCATTTTCTTGAATC  945
      |||||||||||| |||||||||||||| ||||||||||||||||||||||
seq2  TTGAAGTATGAATTTTTCAATAAAATTAAAATGGATCATTTTCTTGAATC  950

seq1  ATCTTGCAGGTTCCTTTTTGC-AGGGATCAG-AGAAATCCATTTCCCTGG  993
      ||||||||||||||||||||| ||||||||| ||||||||||||||||||
seq2  ATCTTGCAGGTTCCTTTTTGCAAGGGATCAGAAGAAATCCATTTCCCTGG  1000

seq1  TCCAGGGCGGGAGGAGTCAGCAGGCAGCAGCC-TTGGCTTGGGAG-AAGG  1041
      |||||||||||||||||||||||||||||||| |||||||||||| || |
seq2  TCCAGGGCGGGAGGAGTCAGCAGGCAGCAGCCTTTGGCTTGGGAGAAATG  1050

seq1  GCACCTC-TGGTCCAGA--GGAGAATGTCT--ATTCT-GAGTGGCTAGAA  1085
      |||| || ||||| |||  |||||||||||   |||| |||||   || |
seq2  GCACTTCTTGGTCAAGAAGGGAGAATGTCTTATTTCTGGAGTGCTAAGGA  1100

seq1  T-CGGTGAAGGAAAACCC-TGCTG-TAGTTG-ATTATAAGGTGAGA-CTG  1130
      | |||||||||||||||| ||||| |||||| ||||| |||||||| |||
seq2  TCCGGTGAAGGAAAACCCTTGCTGTTAGTTGAATTAT-AGGTGAGACCTG  1149

seq1  AAGAGTTCTGTGGGTAAGGGGGCTCCACAGGCCATCAGCCCAAAGTGCAT  1180
      ||  |||| |||||||  ||| || | |||| |||||   | |||  |||
seq2  AA-TGTTCCGTGGGTA--GGGTCTTCCCAGGTCATCA---CTAAGGTCAT  1193

seq1  GCCACACCATTCCCTTTTCCGTTT  1204
      ||||||  |||||||||| |||||
seq2  GCCACA--ATTCCCTTTT-CGTTT  1214

seq1: chr15_4856971_4858057
seq2: B6Ng01-305G14.g_70_1166 (reverse)

seq1  TGTTCTTCCCCAGTGTCAAATGGAAACTAGGT-TACAG-TGGACT-AGGG  47
      |||||||||||||  |||| ||  ||||| || ||||| |||||| ||||
seq2  TGTTCTTCCCCAGGTTCAATTG--AACTAAGTATACAGTTGGACTAAGGG  48

seq1  GCAGGGGTTGTAAGAAGCGGAGGT-AGGAAATTCA-GAACAAA-GCATCT  94
      ||| ||||||||||||||||| || |||||||||| ||||||| ||||||
seq2  GCA-GGGTTGTAAGAAGCGGAAGTAAGGAAATTCAGGAACAAAGGCATCT  97

seq1  TAACAAATTTACCCTAA-GAAAAGGAGGAAAGAAAGTA-GAATATTGTAG  142
      |||| |||||||| ||| |||||||||||||||||||| || ||||||||
seq2  TAACCAATTTACCTTAAGGAAAAGGAGGAAAGAAAGTAGGATTATTGTAG  147

seq1  GGGGAATAGTGTGAGGGAAAACCAATG-AAATAGTGTGCAATGCTGTGTG  191
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGGGAATAGTGTGAGGGAAAACCAATGAAAATAGTGTGCAATGCTGTGTG  197

seq1  ATGT-GAACAAGCATCAACTCATCAA-GGACAGAG-AACCGACAATAGAG  238
      |||| ||||||||||||||||||||| |||||||| ||||||||||||||
seq2  ATGTGGAACAAGCATCAACTCATCAAGGGACAGAGAAACCGACAATAGAG  247

seq1  CC-AATTCCCACCAAAGTTCAACTTGGTGAACCAATAGGTTTTCTTGTAC  287
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTCCCACCAAAGTTCAACTTGGTGAACCAATAGGTTTTCTTGTAC  297

seq1  TTACAGGCATTTAGGTGAGGGGTTAGGTACAGGAGCAGAAATGACTCCAA  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGCATTTAGGTGAGGGGTTAGGTACAGGAGCAGAAATGACTCCAA  347

seq1  GACAGCCACATCACCAAAGCCCATCCCAACATGGGTAACAGTTCAAGGAA  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCCACATCACCAAAGCCCATCCCAACATGGGTAACAGTTCAAGGAA  397

seq1  GGGAGAAGCTTATAGTGTGCTTCAAAACCTTCAGGTGGCTCTACCAAGAT  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAAGCTTATAGTGTGCTTCAAAACCTTCAGGTGGCTCTACCAAGAT  447

seq1  GAAGGCTGTCCAGGTATCTCAGTTATTCTGAGCCTCTTCAAGGCAGCTCA  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTGTCCAGGTATCTCAGTTATTCTGAGCCTCTTCAAGGCAGCTCA  497

seq1  GATGGTTTCTGCTTCTTTCAGGCAGTTCAGCTTGTCTGAGAAATTCTCTC  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTTCTGCTTCTTTCAGGCAGTTCAGCTTGTCTGAGAAATTCTCTC  547

seq1  AGCCATTCTTACTGCTTCTATATGCCTGGGGAAAAGAGGGGTTTAGTGAA  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTCTTACTGCTTCTATATGCCTGGGGAAAAGAGGGGTTTAGTGAA  597

seq1  CCTTGTCTGTTTCAGGAACTTCCTGAAGGCACTAATTTTTTTTTTATTTC  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTCTGTTTCAGGAACTTCCTGAAGGCACTAATTTTTTTTTTATTTC  647

seq1  CTGAGCTTATTAATAAGCTTTTCAGAAAGATACAGTGTTTCACCTCCTCT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTTATTAATAAGCTTTTCAGAAAGATACAGTGTTTCACCTCCTCT  697

seq1  TACATCTTACTGCTTCATCTTCATATGAACAACTTGTGTCTTGATTACCT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCTTACTGCTTCATCTTCATATGAACAACTTGTGTCTTGATTACCT  747

seq1  TCTCTGCAAAGTGAAAGGTTTTCATCTCAGATGGTGAGGTATTCACTAAA  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCAAAGTGAAAGGTTTTCATCTCAGATGGTGAGGTATTCACTAAA  797

seq1  AACAGACTTCCCCTCTGGAAAGAATGTTTCATCTCCCCTTAAAATACCCT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACTTCCCCTCTGGAAAGAATGTTTCATCTCCCCTTAAAATACCCT  847

seq1  ATTGTTTTAATTCCCATCCTGTGTCTTTACAAGCTTCCCTACGAATGGAA  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTAATTCCCATCCTGTGTCTTTACAAGCTTCCCTACGAATGGAA  897

seq1  GGTTTTATTTAATATTGAGGAAATATGGAGTCCCAAGGTATTTTATAATA  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTATTTAATATTGAGGAAATATGGAGTCCCAAGGTATTTTATAATA  947

seq1  TCAGGAAAATTTTTAATTCATTAATATGTTGAAAGAAAGTGACTATGAGA  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAAATTTTTAATTCATTAATATGTTGAAAGAAAGTGACTATGAGA  997

seq1  GATATTGGTAAAGCACTTGTTGCACAAGTCAGATGACCTTTCATTTGGAT  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTGGTAAAGCACTTGTTGCACAAGTCAGATGACCTTTCATTTGGAT  1047

seq1  CTCCAGGACTCACACAGAAGTCAGACATGGCAGGGCAGGCGTCTGAATTC  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGACTCACACAGAAGTCAGACATGGCAGGGCAGGCGTCTGAATTC  1097