BAC Information

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BAC

Clone NameB6Ng01-305P13
Chromosome15 (Build37)
Map Location 56,928,749 - 56,929,914
singlet/doubletsinglet
Overlap genenone
Upstream geneHba-ps3, Has2, EG594843, LOC435442, LOC100040067, LOC100039984
Downstream geneBC026439, Zhx2, Derl1, Wdr67, BC030396, 9130401M01Rik, Zhx1, Atad2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305P13.bB6Ng01-305P13.g
ACCGA099128GA099129
length1,2141,142
definitionB6Ng01-305P13.b B6Ng01-305P13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctgaacatgataaaagcaatctacagcaaacaa
gtagccaacatcaaagtaaatgatgagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctacctattcaacattg
tacttgaattcctaaacagagcaatttgacaacaaaaggagatcaagggg
atacaaattggaaaggaagaaggcaaaatatcacttttttgcaggtgata
tgataatatatatataagtgaccctaaaaattccaccagagaactcctaa
acctgataaacaccttcggtgaagtggctggacataaaattaactcaaac
aagtcaattccctttctctacacaaatgataaacagactgagaaagaaat
tagggaaacaacacccttctgaatagtaacaaatagtataaaataccttg
gcgtgactctaactaaggaagtgaaagatctgtatgaaaagaacttcaag
tctctgaagaaagaaattaaagatctcagaagatggaaagatctccaata
ctcatggattggcacgattaatatagtaaaaatggctaccttgccaaaag
caatctacagattcaatgcaatccccatcaacattccaactcaattcttc
aatgaattagaaagggttatctgcaaattcatctggaataacaaaaaacc
taggatagcaaaatctcttctcaaggataaaagaacctctggtggaatca
acatgcctgaactaaagctgtactacagagcaagtgtgataaaaactgca
tggtactggtatggcaacagacaagtagaccagtggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatctttgacaagggag
ctaaaaccatctagtggaaaaaggacagcattttcaacaaatggtactgg
cacaacttttgggttaacatgtagaagatgtgaattgatccattcctatc
tccttgtactaagtcaatctaagtggatcaggactcacataaagccagaa
gacattgaaacttatagagagaagtgggaatagcctcgagacttgggcac
aggcaaatttctgaatagaatagcatgctgtgctgtaggattggagaatt
ggccatgattccataatgcaagcttcttgttaagcaagacattgtcaatt
agacacaaatggca
gaattcattcagtacagctcttttgctatatctttactcttcactgcatg
ccctgattttcaggattagtggcaaaaatgtattctgacataccaaattt
ctctctggttcaagactttgccctgaaataaaccttttgtttaacctaca
tctctctactccactgttgtctctggtaagcaatgccctcaatttcctta
gagaaacacaaaccactttctagtacttaatctccttctatttcttagag
ttttatctgctcttgatgccaacatctgtttattatccgaatcacttatg
gcgagtgatcttgaatagagaatctctgtctgtgttattttcacttgcct
ctaaatcctgcatgtatgccaagcagtaattcaagacatttccttggaaa
ttgtcctagttaatttccatgtaaaacaatggatgatattggtaaaattg
taaaatactaatcatagctccttttgtttgtttaacttttttctgtaata
cttccatggacagaattgctttgtatatgatattctattaggctattcct
ttcttattttattgatagcaaacccaaagaatagtggaagagatcactca
atgttcttttcttctacctctcttgtcattatcatctgaagttaagtgtt
tttgcgtaagtctgtgaccttttatattctgtagtgttaatctattttcc
attatatgaaaaagaaggaagttaaatgagtcaaataatcccagccataa
aaaattttttcaagatatttcctgtatacattactgtccagaaccttaca
atgctaaagagtatgtcaattctcccaggatattaatcatgtttatcact
gtattatggagacaatttatcaatatgtcagaatgaatggaaatgtgaaa
atggtacagtttacacaagctgtgcaatgtcaatgtacaggaaagtcttt
agtttccattgtgtcattcatcactcacgtcatgagaaattactttttgt
taaaatgtgtcatcatatcatgtgctgcatagagcaatgagaaaatgtac
acatctgtgtgagcaaaggtacacatgtgagaagacaaagcgaaggactt
cttgtggtagacgtgtgatttttcaaaggacttggcttacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_56928749_56929914
seq2: B6Ng01-305P13.g_69_1210 (reverse)

seq1  TTGTAAGCCCCAGACTCCTTTGTGAAAAAATCACACGTCCTTCACCACAA  50
      |||||||||    | |||||||   ||||||||||||||    |||||||
seq2  TTGTAAGCC---AAGTCCTTTG---AAAAATCACACGTC---TACCACAA  41

seq1  GAAAGTCCCTTCGCCTTTGGTTCCTTCTCACATTGTGTACCTTTGCTCAC  100
      | |||| |||||| |||||    ||||||||| |||||||||||||||||
seq2  G-AAGT-CCTTCG-CTTTG---TCTTCTCACA-TGTGTACCTTTGCTCAC  84

seq1  ACAGATTGTGTACCTTTTCTCATTGCTTCTTATGCAGCCACATGATATGA  150
      ||||| ||||||| |||||||||||||   ||||||| ||||||||||| 
seq2  ACAGA-TGTGTACATTTTCTCATTGCT--CTATGCAG-CACATGATATG-  129

seq1  ATGACCACAATTTTAACAAAAAGTAATTTCTCATGACGTGAGTGATGAAT  200
      |||| ||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATGA-CAC-ATTTTAACAAAAAGTAATTTCTCATGACGTGAGTGATGAAT  177

seq1  GACAACAATGGAAACTAAAGACTTTCCTGTACATTGACATTGCACAGCTT  250
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAC-ACAATGGAAACTAAAGACTTTCCTGTACATTGACATTGCACAGCTT  226

seq1  GTGTAAACTGTACCATTTTCACATTTCCATTCATTCTGACATATTGATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAACTGTACCATTTTCACATTTCCATTCATTCTGACATATTGATAA  276

seq1  ATTGTCTCCATAATACAGTGATAAACATGATTAATATCCTGGGAGAATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTCCATAATACAGTGATAAACATGATTAATATCCTGGGAGAATTG  326

seq1  ACATACTCTTTAGCATTGTAAGGTTCTGGACAGTAATGTATACAGGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACTCTTTAGCATTGTAAGGTTCTGGACAGTAATGTATACAGGAAAT  376

seq1  ATCTTGAAAAAATTTTTTATGGCTGGGATTATTTGACTCATTTAACTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGAAAAAATTTTTTATGGCTGGGATTATTTGACTCATTTAACTTCC  426

seq1  TTCTTTTTCATATAATGGAAAATAGATTAACACTACAGAATATAAAAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTCATATAATGGAAAATAGATTAACACTACAGAATATAAAAGGT  476

seq1  CACAGACTTACGCAAAAACACTTAACTTCAGATGATAATGACAAGAGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACTTACGCAAAAACACTTAACTTCAGATGATAATGACAAGAGAGG  526

seq1  TAGAAGAAAAGAACATTGAGTGATCTCTTCCACTATTCTTTGGGTTTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAAAAGAACATTGAGTGATCTCTTCCACTATTCTTTGGGTTTGCT  576

seq1  ATCAATAAAATAAGAAAGGAATAGCCTAATAGAATATCATATACAAAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATAAAATAAGAAAGGAATAGCCTAATAGAATATCATATACAAAGCA  626

seq1  ATTCTGTCCATGGAAGTATTACAGAAAAAAGTTAAACAAACAAAAGGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTCCATGGAAGTATTACAGAAAAAAGTTAAACAAACAAAAGGAGC  676

seq1  TATGATTAGTATTTTACAATTTTACCAATATCATCCATTGTTTTACATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTAGTATTTTACAATTTTACCAATATCATCCATTGTTTTACATGG  726

seq1  AAATTAACTAGGACAATTTCCAAGGAAATGTCTTGAATTACTGCTTGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAACTAGGACAATTTCCAAGGAAATGTCTTGAATTACTGCTTGGCA  776

seq1  TACATGCAGGATTTAGAGGCAAGTGAAAATAACACAGACAGAGATTCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGCAGGATTTAGAGGCAAGTGAAAATAACACAGACAGAGATTCTCT  826

seq1  ATTCAAGATCACTCGCCATAAGTGATTCGGATAATAAACAGATGTTGGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGATCACTCGCCATAAGTGATTCGGATAATAAACAGATGTTGGCA  876

seq1  TCAAGAGCAGATAAAACTCTAAGAAATAGAAGGAGATTAAGTACTAGAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAGCAGATAAAACTCTAAGAAATAGAAGGAGATTAAGTACTAGAAA  926

seq1  GTGGTTTGTGTTTCTCTAAGGAAATTGAGGGCATTGCTTACCAGAGACAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTGTGTTTCTCTAAGGAAATTGAGGGCATTGCTTACCAGAGACAA  976

seq1  CAGTGGAGTAGAGAGATGTAGGTTAAACAAAAGGTTTATTTCAGGGCAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAGTAGAGAGATGTAGGTTAAACAAAAGGTTTATTTCAGGGCAAA  1026

seq1  GTCTTGAACCAGAGAGAAATTTGGTATGTCAGAATACATTTTTGCCACTA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGAACCAGAGAGAAATTTGGTATGTCAGAATACATTTTTGCCACTA  1076

seq1  ATCCTGAAAATCAGGGCATGCAGTGAAGAGTAAAGATATAGCAAAAGAGC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGAAAATCAGGGCATGCAGTGAAGAGTAAAGATATAGCAAAAGAGC  1126

seq1  TGTACTGAATGAATTC  1166
      ||||||||||||||||
seq2  TGTACTGAATGAATTC  1142