BAC Information

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BAC

Clone NameB6Ng01-306E14
Chromosome15 (Build37)
Map Location 34,937,239 - 35,060,696
singlet/doubletdoublet
Overlap geneStk3
Upstream geneLOC675463, Mtdh, Laptm4b, Matn2, Rpl30, BC030476, Hrsp12, Pop1, Npal2, Kcns2
Downstream geneOsr2, Vps13b, EG666183, Cox6c, Rgs22
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306E14.bB6Ng01-306E14.g
ACCGA099364GA099365
length635617
definitionB6Ng01-306E14.b B6Ng01-306E14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,937,239 - 34,937,873)(35,060,080 - 35,060,696)
sequence
gaattcttttctatttaacagtaagaaacatcggaaaattatttgttagt
gtaagacacactgaggtacactgtagacatactgtgagagactcagtgag
gcacagtgtagatatacctacatgcatatggtgtggcatatttattagtt
gagagttctgaggcaattctgttaagaagaaaaagttccacaaacttgtt
tttctattataaatattaagttatttctttttgctttagaatccacgaat
tttttaaaaagcctcttggttttttagatacagagtttatttacagtagg
cataaaatacgtcactcaggtaaccttatcactagcatttataacatgta
ataatcttttcagggatcttggatttacatacattagagtggagccagaa
gtcaagggacaatgctgagttaagaagcacaaggaaaccactgggagata
aaacccacagcaagagctcacaaaacaagggacatgggagcacatagaag
acaaacaacaacaaacgcacgagagttaagtgcatgtgtcacaactccat
gttttcaatctttagacagtcctgagactcattagctttgggaatctgtg
aagaggaggaggagaaggaagaggaggaggaggag
gaattctctagaacgtggaagagtttccactttaaagtcaagagtatatt
ttttgaatctttgatagaaacttaaaacatttccactaaaatcagggaca
agacaaggctgtccactcttttcctaactatttaatataatacttgaagt
tctagccagagaaataagacaactaaaggagatacaaaggggatacaaat
tagaaaagaagaagtcaaagtatctctatttgatgatgatatgatagtat
atgtaaatgatcccaagaattttaccagagaactcctacaactgataaac
accttcagcaaaggatgcaaagttaattaaaaaaaatcagaaaccttcct
ttatacaataataaaggggccaagaaagaaattaggaaaataacaccctt
tgcaatagccatgaataatataaaatatcttagtgtaactctatccaagc
agatgaaagatctgtatgagaatttctatatttaagttgagaacatgagg
tgttaaaaacctactagtatcatagacagataaaactatgctcatattgt
atttgtcatatcagtaaagtagaaaagtactgtgtgtgtgtgttaggtgt
gtgtgtgtgtgagtgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_34937239_34937873
seq2: B6Ng01-306E14.b_44_678

seq1  GAATTCTTTTCTATTTAACAGTAAGAAACATCGGAAAATTATTTGTTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTATTTAACAGTAAGAAACATCGGAAAATTATTTGTTAGT  50

seq1  GTAAGACACACTGAGGTACACTGTAGACATACTGTGAGAGACTCAGTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGACACACTGAGGTACACTGTAGACATACTGTGAGAGACTCAGTGAG  100

seq1  GCACAGTGTAGATATACCTACATGCATATGGTGTGGCATATTTATTAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGTGTAGATATACCTACATGCATATGGTGTGGCATATTTATTAGTT  150

seq1  GAGAGTTCTGAGGCAATTCTGTTAAGAAGAAAAAGTTCCACAAACTTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTCTGAGGCAATTCTGTTAAGAAGAAAAAGTTCCACAAACTTGTT  200

seq1  TTTCTATTATAAATATTAAGTTATTTCTTTTTGCTTTAGAATCCACGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTATAAATATTAAGTTATTTCTTTTTGCTTTAGAATCCACGAAT  250

seq1  TTTTTAAAAAGCCTCTTGGTTTTTTAGATACAGAGTTTATTTACAGTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAAAGCCTCTTGGTTTTTTAGATACAGAGTTTATTTACAGTAGG  300

seq1  CATAAAATACGTCACTCAGGTAACCTTATCACTAGCATTTATAACATGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAATACGTCACTCAGGTAACCTTATCACTAGCATTTATAACATGTA  350

seq1  ATAATCTTTTCAGGGATCTTGGATTTACATACATTAGAGTGGAGCCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTTTTCAGGGATCTTGGATTTACATACATTAGAGTGGAGCCAGAA  400

seq1  GTCAAGGGACAATGCTGAGTTAAGAAGCACAAGGAAACCACTGGGAGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGGGACAATGCTGAGTTAAGAAGCACAAGGAAACCACTGGGAGATA  450

seq1  AAACCCACAGCAAGAGCTCACAAAACAAGGGACATGGGAGCACATAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCACAGCAAGAGCTCACAAAACAAGGGACATGGGAGCACATAGAAG  500

seq1  ACAAACAACAACAAACGCACGAGAGTTAAGTGCATGTGTCACAACTCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAACAACAAACGCACGAGAGTTAAGTGCATGTGTCACAACTCCAT  550

seq1  GTTTTCAATCTTTAGACAGTCCTGAGACTCATTAGCTTTGGGAATCTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAATCTTTAGACAGTCCTGAGACTCATTAGCTTTGGGAATCTGTG  600

seq1  AAGAGGAGGAGGAGAAGGAAGAGGAGGAGGAGGAG  635
      |||||||||||||||||||||||||||||||||||
seq2  AAGAGGAGGAGGAGAAGGAAGAGGAGGAGGAGGAG  635

seq1: chr15_35060080_35060696
seq2: B6Ng01-306E14.g_62_678 (reverse)

seq1  TACACTCACACACACACACACCTAACACACACACACAGTACTTTTCTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTCACACACACACACACCTAACACACACACACAGTACTTTTCTACT  50

seq1  TTACTGATATGACAAATACAATATGAGCATAGTTTTATCTGTCTATGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGATATGACAAATACAATATGAGCATAGTTTTATCTGTCTATGATA  100

seq1  CTAGTAGGTTTTTAACACCTCATGTTCTCAACTTAAATATAGAAATTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAGGTTTTTAACACCTCATGTTCTCAACTTAAATATAGAAATTCTC  150

seq1  ATACAGATCTTTCATCTGCTTGGATAGAGTTACACTAAGATATTTTATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGATCTTTCATCTGCTTGGATAGAGTTACACTAAGATATTTTATAT  200

seq1  TATTCATGGCTATTGCAAAGGGTGTTATTTTCCTAATTTCTTTCTTGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATGGCTATTGCAAAGGGTGTTATTTTCCTAATTTCTTTCTTGGCC  250

seq1  CCTTTATTATTGTATAAAGGAAGGTTTCTGATTTTTTTTAATTAACTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATTATTGTATAAAGGAAGGTTTCTGATTTTTTTTAATTAACTTTG  300

seq1  CATCCTTTGCTGAAGGTGTTTATCAGTTGTAGGAGTTCTCTGGTAAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTTGCTGAAGGTGTTTATCAGTTGTAGGAGTTCTCTGGTAAAATT  350

seq1  CTTGGGATCATTTACATATACTATCATATCATCATCAAATAGAGATACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGATCATTTACATATACTATCATATCATCATCAAATAGAGATACTT  400

seq1  TGACTTCTTCTTTTCTAATTTGTATCCCCTTTGTATCTCCTTTAGTTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTCTTCTTTTCTAATTTGTATCCCCTTTGTATCTCCTTTAGTTGTC  450

seq1  TTATTTCTCTGGCTAGAACTTCAAGTATTATATTAAATAGTTAGGAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTCTGGCTAGAACTTCAAGTATTATATTAAATAGTTAGGAAAAG  500

seq1  AGTGGACAGCCTTGTCTTGTCCCTGATTTTAGTGGAAATGTTTTAAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGACAGCCTTGTCTTGTCCCTGATTTTAGTGGAAATGTTTTAAGTTT  550

seq1  CTATCAAAGATTCAAAAAATATACTCTTGACTTTAAAGTGGAAACTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAAAGATTCAAAAAATATACTCTTGACTTTAAAGTGGAAACTCTTC  600

seq1  CACGTTCTAGAGAATTC  617
      |||||||||||||||||
seq2  CACGTTCTAGAGAATTC  617