BAC Information

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BAC

Clone NameB6Ng01-306O07
Chromosome15 (Build37)
Map Location 22,687,777 - 22,794,830
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040351, EG545091
Downstream geneCdh18, LOC624863
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306O07.bB6Ng01-306O07.g
ACCGA099808GA099809
length5001,105
definitionB6Ng01-306O07.b B6Ng01-306O07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,794,325 - 22,794,830)(22,687,777 - 22,688,889)
sequence
atactgctattctcaactaaagcaagagatttttacttctggaaattaat
acatttcctatttaaaccatgttccaaataatgtcaaacatagaactgtg
agtttgagctgcagttaccatagttgttattgctatcgatgagcattgat
atcgactttgctgtcaaaaaggcattgattcacatacacagaccccagaa
aatatggtcacgaagtttgttctcatatatactttatgtagaatgactgt
aattttttgttaaaataagtggttgtatcattcaaatagacaattataac
aatagttaaatattattaatggattttgaagaaatggtatcttgtactca
tctaagtttatttcatcttatttctgtgaagacgtgaaaaagaacttgtt
aatagagtataaaagagaaatgttaaaaaaaaagaatagtgataattaaa
aaataatggttgcttcttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt


gaattctatctcctagtcattgaatgttttggttcttccataataaacat
ccaaatgaggatcaggactacaacattaatatagttaatattttaacctg
ttgatcgattctctgtaagttgagctatatcagcatttcaatggaattat
ctgttgtgattttggaagtgaattaatttatagtgtttccatcatgagga
tactgtaaatcacaatgaatgtttatgtatgtattataaattttttatat
tgtacctggtgctaaaaatcataacaaaaactatttaaaacaataattat
ttaggaaaaatacaggtcatacttcaaagtgcttaaatctagatgaattt
agataatttatcatgataatatctactgtatagggaaaaaagaaagcaga
aaaaaaagattattttctccttactgtgtatagcaaacatccagaggtaa
acacttccttactttgccctgtgatcaatgcattctacagttcaaattct
aagaatttaacccacaatgtaacactgtgaagatttgaggagcttcaggt
cgttggtaggttatacataatctgtctcaagaatgaattaatgaagagtc
tcatttagttactgtatgaggaggctactgataaagtagaatgtccttaa
cttttctctaagataaacatgatttctcattgcctttccccatgcaatga
cacagcaagctgactctcaacagaatactctaccatgagctgctcatgta
tcatatgtaggaaaattcaccgttgattataaataagcaaatctcaggaa
ttctgttacactggtacaactaaaagtaaaggtactttatttattattat
tattattatttaaaatgacttggaaagtatgtctcaacatctttgcactc
tcttcaatttcaagcacatagaatagcaaaccattaaagagataaaacat
tccatgcattgtttaatgtgagtacattcttcttgaaacacactggatta
cttgcatttttaaattcttgttattgagcaaatgctgtctatcacatgaa
tttgaacaagatcaagtgagggagagaaagaaatacctggcctgatttct
tacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_22794325_22794830
seq2: B6Ng01-306O07.b_48_553 (reverse)

seq1  ACACACACACACACACACACACACACACACACAAGAAGCAACCATTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACAAGAAGCAACCATTATTT  50

seq1  TTTAATTATCACTATTCTTTTTTTTTAACATTTCTCTTTTATACTCTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTATCACTATTCTTTTTTTTTAACATTTCTCTTTTATACTCTATT  100

seq1  AACAAGTTCTTTTTCACGTCTTCACAGAAATAAGATGAAATAAACTTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTTCTTTTTCACGTCTTCACAGAAATAAGATGAAATAAACTTAGA  150

seq1  TGAGTACAAGATACCATTTCTTCAAAATCCATTAATAATATTTAACTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTACAAGATACCATTTCTTCAAAATCCATTAATAATATTTAACTATT  200

seq1  GTTATAATTGTCTATTTGAATGATACAACCACTTATTTTAACAAAAAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAATTGTCTATTTGAATGATACAACCACTTATTTTAACAAAAAATT  250

seq1  ACAGTCATTCTACATAAAGTATATATGAGAACAAACTTCGTGACCATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCATTCTACATAAAGTATATATGAGAACAAACTTCGTGACCATATT  300

seq1  TTCTGGGGTCTGTGTATGTGAATCAATGCCTTTTTGACAGCAAAGTCGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGGTCTGTGTATGTGAATCAATGCCTTTTTGACAGCAAAGTCGAT  350

seq1  ATCAATGCTCATCGATAGCAATAACAACTATGGTAACTGCAGCTCAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATGCTCATCGATAGCAATAACAACTATGGTAACTGCAGCTCAAACT  400

seq1  CACAGTTCTATGTTTGACATTATTTGGAACATGGTTTAAATAGGAAATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTCTATGTTTGACATTATTTGGAACATGGTTTAAATAGGAAATGT  450

seq1  ATTAATTTCCAGAAGTAAAAATCTCTTGCTTTAGTTGAGAATAGCAGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTCCAGAAGTAAAAATCTCTTGCTTTAGTTGAGAATAGCAGTAT  500

seq1  GAATTC  506
      ||||||
seq2  GAATTC  506


seq1: chr15_22687777_22688889
seq2: B6Ng01-306O07.g_68_1172

seq1  GAATTCTATCTCCTAGTCATTGAATGTTTTGGTTCTTCCATAATAAACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCTCCTAGTCATTGAATGTTTTGGTTCTTCCATAATAAACAT  50

seq1  CCAAATGAGGATCAGGACTACAACATTAATATAGTTAATATTTTAACCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATGAGGATCAGGACTACAACATTAATATAGTTAATATTTTAACCTG  100

seq1  TTGATCGATTCTCTGTAAGTTGAGCTATATCAGCATTTCAATGGAATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCGATTCTCTGTAAGTTGAGCTATATCAGCATTTCAATGGAATTAT  150

seq1  CTGTTGTGATTTTGGAAGTGAATTAATTTATAGTGTTTCCATCATGAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTGATTTTGGAAGTGAATTAATTTATAGTGTTTCCATCATGAGGA  200

seq1  TACTGTAAATCACAATGAATGTTTATGTATGTATTATAAATTTTTTATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTAAATCACAATGAATGTTTATGTATGTATTATAAATTTTTTATAT  250

seq1  TGTACCTGGTGCTAAAAATCATAACAAAAACTATTTAAAACAATAATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCTGGTGCTAAAAATCATAACAAAAACTATTTAAAACAATAATTAT  300

seq1  TTAGGAAAAATACAGGTCATACTTCAAAGTGCTTAAATCTAGATGAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAAAAATACAGGTCATACTTCAAAGTGCTTAAATCTAGATGAATTT  350

seq1  AGATAATTTATCATGATAATATCTACTGTATAGGGAAAAAAGAAAGCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATTTATCATGATAATATCTACTGTATAGGGAAAAAAGAAAGCAGA  400

seq1  AAAAAAAGATTATTTTCTCCTTACTGTGTATAGCAAACATCCAGAGGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGATTATTTTCTCCTTACTGTGTATAGCAAACATCCAGAGGTAA  450

seq1  ACACTTCCTTACTTTGCCCTGTGATCAATGCATTCTACAGTTCAAATTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCCTTACTTTGCCCTGTGATCAATGCATTCTACAGTTCAAATTCT  500

seq1  AAGAATTTAACCCACAATGTAACACTGTGAAGATTTGAGGAGCTTCAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTAACCCACAATGTAACACTGTGAAGATTTGAGGAGCTTCAGGT  550

seq1  CGTTGGTAGGTTATACATAATCTGTCTCAAGAATGAATTAATGAAGAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGGTAGGTTATACATAATCTGTCTCAAGAATGAATTAATGAAGAGTC  600

seq1  TCATTTAGTTACTGTATGAGGAGGCTACTGATAAAGTAGAATGTCCTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAGTTACTGTATGAGGAGGCTACTGATAAAGTAGAATGTCCTTAA  650

seq1  CTTTTCTCTAAGATAAACATGATTTCTCATTGCCTTTCCCCATGCAATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTCTAAGATAAACATGATTTCTCATTGCCTTTCCCCATGCAATGA  700

seq1  CACAGCAAGCTGACTCTCAACAGAATACTCTACCATGAGCTGCTCATGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAAGCTGACTCTCAACAGAATACTCTACCATGAGCTGCTCATGTA  750

seq1  TCATATGTAGGAAAATTCACCGTTGATTATAAATAAGCAAATCTCAGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATGTAGGAAAATTCACCGTTGATTATAAATAAGCAAATCTCAGGAA  800

seq1  TTCTGTTACACTGGTACAACTAAAAGT-AAGGTACTTTATTTATTATTAT  849
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTCTGTTACACTGGTACAACTAAAAGTAAAGGTACTTTATTTATTATTAT  850

seq1  TATTATTATTTAAAATGACTTGGAAAGTATGTCTCAACATCTTTGCACTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTTAAAATGACTTGGAAAGTATGTCTCAACATCTTTGCACTC  900

seq1  TCTTCAATTTCAAGCACATAGAATAAGCAAACCATTAAAGAGATAAAACA  949
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCTTCAATTTCAAGCACATAGAAT-AGCAAACCATTAAAGAGATAAAACA  949

seq1  TTCCATGCATTGTTTAATGTGAAGTACATTC-TCTTGAAACACACTGGAA  998
      ||||||||||||||||||||| ||||||||| |||||||||||||||| |
seq2  TTCCATGCATTGTTTAATGTG-AGTACATTCTTCTTGAAACACACTGG-A  997

seq1  TTACTTGCATTTTTAAAATTCTGTTATTTGAAGGCAAATGCTGTTCTATT  1048
      ||||||||||||||||| |  ||||| ||||  |||||||||| |||| |
seq2  TTACTTGCATTTTTAAATTCTTGTTA-TTGA--GCAAATGCTG-TCTA-T  1042

seq1  CACATGAATTTTAAACAAAGATTCAAGTGA-GGAGAGAAGAAAATACCTT  1097
      ||||||||||| ||   |||| |||||||| ||||||||  |||||||| 
seq2  CACATGAATTTGAA--CAAGA-TCAAGTGAGGGAGAGAAAGAAATACCTG  1089

seq1  GCTGAATTTCTTACCT  1113
      ||   |||||||||||
seq2  GCCTGATTTCTTACCT  1105


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