BAC Information

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BAC

Clone NameB6Ng01-307C02
Chromosome15 (Build37)
Map Location 62,396,393 - 62,397,562
singlet/doubletsinglet
Overlap genenone
Upstream geneMyc, Pvt1, LOC100040584, H2afy3
Downstream geneLOC100040430, Tsg101-ps, EG239502
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307C02.bB6Ng01-307C02.g
ACCGA099982GA099983
length1,159449
definitionB6Ng01-307C02.b B6Ng01-307C02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccaacagacatactttttattttaatttgatgaaatcagatgg
aatttcaagctggaagagaacttgatcagatggtctcatttctcatgggg
aaaatgaaatgcaagaatacaaagtaacttcccaattttacttagctatt
gaaaaccccagcagaaagacattctaggctgctctggtccagcctgttct
aatgtcagatcctgtggcacaggagcaggtagaagatggcgatcaataac
aatttgtatggacaacaagatttctctgtgtggcactcagtggatctata
acatttttgtatctattcccaaggaaaaacacgtgcaaataacagcaact
atcccatagtttcaagtgagataatggtacagactctgtgcacaaaaact
acaggcctatgttccccaaataatttgcctctttgtgaatactgaggaca
gctatgtttttagtgctttgagcagggtgggatcatacaactaatatggc
caatagaataagaatcaacatgatattatggccacattagccagcaccta
ttatgtgccaactctttctgtaaatggccacacgttgtggatgtaagaat
cacaagctaggcagagatttgaatcactataaggcaaagaatcagatgat
caataacacccacattgatttctgtaggtgagacaaaaaaaaatgtgctt
tctgggttattgattatagcatcatttggtaattattttaacaaccatag
taaacactatgtttttccagttaagaattagtaccagttatagtttccta
caagtggctcttcctttccacaggactaaacactgagaactacaatcaac
gctgatgagtgaagtcctcagattcttcagtgcttggcaacaattcaact
gtatgctatgagatgaagctgtagatgtatatttattacctcttaatttc
ttcaaaaatcagcaagtaaggaaagttctcatttttaacagatactataa
agcaaattttaagttctggcactattctagtacagcacatatggttgcca
atgcaccctgtgatgctaattttggatatcactgactgagcaaggggcct
catgaaactggtgaagggaaggtgcatgttgtaaacagtcagaggctaaa
gggtgggga

taggaggttttggataaagaactaaccataaagaataggaggaggaaaat
ggaaatcctgtgtttacaggtatatgtatgtgtggtgtgtctctgtgtac
atgtgtgtggtatgcttgtgtggacatgtatgtatgtgatgtgtttatga
ctgtgtggtgtatgtgtgtggtgagaggctccttcctatcgcccttccca
actgttgcccagcctgaatgggtaatggtgtttgatgcggtattttctcc
ttacgcatctgtgcggtattcacacttcatatggtgtattttttttttca
atctgctttgatgctctttagttaatccatccccgatactctccaacatc
cgttgacgcgtcctgatgggcttgtctgcttccggcattcgcttacagac
aagctgtgaccgtctccgggatttgcatgtgttagaggttttttccgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_62396393_62397562
seq2: B6Ng01-307C02.b_46_1204 (reverse)

seq1  TCCCCACCCTCTGGCCTTCTGACTGTTCTACAACATTTCCACCTCCCTTT  50
      |||||||||| | ||| |||||||||| |||||||  | ||||| || ||
seq2  TCCCCACCCTTTAGCC-TCTGACTGTT-TACAACA--TGCACCTTCCCTT  46

seq1  CAACAAGTTTTCATGA-GCCCCTTGCTCCAGTCAAGTTGATTATCAAAAT  99
      || ||   |||||||| |||||||||| ||||||   ||| |||| ||| 
seq2  CACCA--GTTTCATGAGGCCCCTTGCT-CAGTCA--GTGA-TATCCAAAA  90

seq1  TAAGCATCACAGGGTGCATTTGGCAA-CATATGTGCTGTTACTAGAATAG  148
      | |||||||||||||||| ||||||| ||||||||||| |||||||||||
seq2  TTAGCATCACAGGGTGCA-TTGGCAACCATATGTGCTG-TACTAGAATAG  138

seq1  TGCCAGAACTTAAAATTTGCTTAATAGTTATCTGTTTAAAAATGAGAACT  198
      |||||||||||||||||||||| |||| |||||| |||||||||||||||
seq2  TGCCAGAACTTAAAATTTGCTTTATAG-TATCTG-TTAAAAATGAGAACT  186

seq1  TTCCTTACTTGCTGATTTTTGAAG-AATTAAGAGGTAATAAATATACATC  247
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTCCTTACTTGCTGATTTTTGAAGAAATTAAGAGGTAATAAATATACATC  236

seq1  TACAGCTTCATCTCATAGCATACAGTTGAATTGTTGCCAAGCACTGAAGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTTCATCTCATAGCATACAGTTGAATTGTTGCCAAGCACTGAAGA  286

seq1  ATCTGAGGACTTCACTCATCAGCGTTGATTGTAGTTCTCAGTGTTTAGTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGGACTTCACTCATCAGCGTTGATTGTAGTTCTCAGTGTTTAGTC  336

seq1  CTGTGGAAAGGAAGAGCCACTTGTAGGAAACTATAACTGGTACTAATTCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGAAAGGAAGAGCCACTTGTAGGAAACTATAACTGGTACTAATTCT  386

seq1  TAACTGGAAAAACATAGTGTTTACTATGGTTGTTAAAATAATTACCAAAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGGAAAAACATAGTGTTTACTATGGTTGTTAAAATAATTACCAAAT  436

seq1  GATGCTATAATCAATAACCCAGAAAGCACATTTTTTTTTGTCTCACCTAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTATAATCAATAACCCAGAAAGCACATTTTTTTTTGTCTCACCTAC  486

seq1  AGAAATCAATGTGGGTGTTATTGATCATCTGATTCTTTGCCTTATAGTGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCAATGTGGGTGTTATTGATCATCTGATTCTTTGCCTTATAGTGA  536

seq1  TTCAAATCTCTGCCTAGCTTGTGATTCTTACATCCACAACGTGTGGCCAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATCTCTGCCTAGCTTGTGATTCTTACATCCACAACGTGTGGCCAT  586

seq1  TTACAGAAAGAGTTGGCACATAATAGGTGCTGGCTAATGTGGCCATAATA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAAAGAGTTGGCACATAATAGGTGCTGGCTAATGTGGCCATAATA  636

seq1  TCATGTTGATTCTTATTCTATTGGCCATATTAGTTGTATGATCCCACCCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTGATTCTTATTCTATTGGCCATATTAGTTGTATGATCCCACCCT  686

seq1  GCTCAAAGCACTAAAAACATAGCTGTCCTCAGTATTCACAAAGAGGCAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAAGCACTAAAAACATAGCTGTCCTCAGTATTCACAAAGAGGCAAA  736

seq1  TTATTTGGGGAACATAGGCCTGTAGTTTTTGTGCACAGAGTCTGTACCAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGGGGAACATAGGCCTGTAGTTTTTGTGCACAGAGTCTGTACCAT  786

seq1  TATCTCACTTGAAACTATGGGATAGTTGCTGTTATTTGCACGTGTTTTTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCACTTGAAACTATGGGATAGTTGCTGTTATTTGCACGTGTTTTTC  836

seq1  CTTGGGAATAGATACAAAAATGTTATAGATCCACTGAGTGCCACACAGAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGAATAGATACAAAAATGTTATAGATCCACTGAGTGCCACACAGAG  886

seq1  AAATCTTGTTGTCCATACAAATTGTTATTGATCGCCATCTTCTACCTGCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTGTTGTCCATACAAATTGTTATTGATCGCCATCTTCTACCTGCT  936

seq1  CCTGTGCCACAGGATCTGACATTAGAACAGGCTGGACCAGAGCAGCCTAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGCCACAGGATCTGACATTAGAACAGGCTGGACCAGAGCAGCCTAG  986

seq1  AATGTCTTTCTGCTGGGGTTTTCAATAGCTAAGTAAAATTGGGAAGTTAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTTTCTGCTGGGGTTTTCAATAGCTAAGTAAAATTGGGAAGTTAC  1036

seq1  TTTGTATTCTTGCATTTCATTTTCCCCATGAGAAATGAGACCATCTGATC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTCTTGCATTTCATTTTCCCCATGAGAAATGAGACCATCTGATC  1086

seq1  AAGTTCTCTTCCAGCTTGAAATTCCATCTGATTTCATCAAATTAAAATAA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTCTTCCAGCTTGAAATTCCATCTGATTTCATCAAATTAAAATAA  1136

seq1  AAAGTATGTCTGTTGGAGAATTC  1170
      |||||||||||||||||||||||
seq2  AAAGTATGTCTGTTGGAGAATTC  1159


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