BAC Information

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BAC

Clone NameB6Ng01-307J07
Chromosome15 (Build37)
Map Location 19,788,852 - 19,789,950
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh10, EG666857, EG666875, LOC621884, LOC100040265
Downstream geneAcot10, LOC100040302
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307J07.bB6Ng01-307J07.g
ACCGA100315GA100316
length1,1491,085
definitionB6Ng01-307J07.b B6Ng01-307J07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctactaacagaaatcaagaccactcaccatcatcagaacgcagca
ctcccaccccacctagtcctggacaccccaacaaaaccgaaaatctagac
ccagatttaaagacatttctcatgatgatgatagaggacatcaagaagga
ctttcataagtcacttaaagaattacaggagagcactgctaaagagttac
aggcccttaaagaaaagcaggaaaacacagccaaacaggtagaagtcctt
aaagacaaacaggaaaactcatccaaacaggtaatggaaatgaacaaaac
catactagaactaaaaagggaagtagacacagtaaagaaaacccaaagcg
aggcaacgctggagatagaaaccctaggaaagagatctggaacaatagat
gcgagcatcagcaacagaatataagaaatggaagagagaatcttaggtgc
agaagattccatagagaacatcgacacaacagtcaaagaaaatacaaaat
tcaaaaggatcctaactcaaaacatccaggaaatccaggacacaatgaga
agaccaaacctacggataataggaattgatgagaatgaagattttcaact
taaatggccagctaatatcttcaacaaaataatagaagaaaacttcccaa
acataaagaaagagaagccaatgatcatacaagaagcctaaagaactaca
aatagactggaccagaaaagaaattccgccggacacataataatcagaac
aacaaatgcactaaataaagatagaatattaaaagcagtaagggagaaag
gtcaagtaacatataaaggaatgcctatcagaattgcaccagacttttca
ccagagactatgaaagccagaagagcctggacagatgttatacagacaat
aagagaacacaaatgccagtccaggcccaatatacctgggccaaactctc
aatttaccatagatgggagaaaccaaagtattccacgaacaaatccaatt
cacacatattctttcacgaatccagcccttcaagatatacagaaaagaag
catacaagacagaaatcacgccttagaacagcagaagtaatccttcaaac
catgagacggcacagacggaatgccaatctggcaccacacagaaattta
gaattccaagaattcatgaagagattaaaattgaaattgctttgtaggac
ggtctcatttgctagctttatttaggtcaaacatcacaaaaattccctat
acttcgtaatgtattatgtagtgttagagaactgcataaaaagaaccagc
aggaatatcaacggaattgagaaaaaaaaaatatcagttttgtgcaaggg
gaagcattcttctacttgggaattacaaagggttatttaattttgattga
aattagtgaaggtcatatgaacctgaaagaatattgcatcatcttgaaga
aagacttttaggtatacctgtgaggaaataacttgaataaattaattgtg
gtgaaaagacccatacagcatgcctgatattgtatggtaacttgaagctt
gtattgtaataaatgcaggaaaaaaaatgagcaccatcacccacacaata
ttgtctgattctcaactggggatgtaatatgaaaagttcctacaatcttc
tcctcccctagcttcctattttttgagacagaagattctctgtgtaggca
tggctgtcttgaaactgactctgtagaccaggctgtcctggaatttagag
atctgactctgccagcctctccttcaaagtgctaggattaaagacaagag
ccatcacacccagccccatgttctcttttttgcttcggttctctcaggct
acagcactatacacaatacattgaacttttagctggtataatcatttcct
ttgtcacattactgaatgtcactgtatgtatctcagaagaaaaccctgac
tattttttctttatatggctatcttttcaaatatcttgaattcatggtat
ataaacactgctcaggaacttaagagaatgggtattgttagttatgaaaa
tcttttctgctaatgctgcctttctgtctcttctggactacaatagtgtg
gcaattgaatagattctcaggattatttaggacttttacagttgatagtg
acaaaaaaaatttatttctttgataaatgttgttcttgccttacccactt
acattgatctttagagtgatagctctgcatataga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_19788852_19789950
seq2: B6Ng01-307J07.g_65_1149

seq1  GAATTCCAAGAATTCATGAAGAGATTAAAATTGAAATTGCTTTGTAGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGAATTCATGAAGAGATTAAAATTGAAATTGCTTTGTAGGAC  50

seq1  GGTCTCATTTGCTAGCTTTATTTAGGTCAAACATCACAAAAATTCCCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCATTTGCTAGCTTTATTTAGGTCAAACATCACAAAAATTCCCTAT  100

seq1  ACTTCGTAATGTATTATGTAGTGTTAGAGAACTGCATAAAAAGAACCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCGTAATGTATTATGTAGTGTTAGAGAACTGCATAAAAAGAACCAGC  150

seq1  AGGAATATCAACGGAATTGAGAAAAAAAAAATATCAGTTTTGTGCAAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATATCAACGGAATTGAGAAAAAAAAAATATCAGTTTTGTGCAAGGG  200

seq1  GAAGCATTCTTCTACTTGGGAATTACAAAGGGTTATTTAATTTTGATTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATTCTTCTACTTGGGAATTACAAAGGGTTATTTAATTTTGATTGA  250

seq1  AATTAGTGAAGGTCATATGAACCTGAAAGAATATTGCATCATCTTGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTGAAGGTCATATGAACCTGAAAGAATATTGCATCATCTTGAAGA  300

seq1  AAGACTTTTAGGTATACCTGTGAGGAAATAACTTGAATAAATTAATTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTTTAGGTATACCTGTGAGGAAATAACTTGAATAAATTAATTGTG  350

seq1  GTGAAAAGACCCATACAGCATGCCTGATATTGTATGGTAACTTGAAGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAAGACCCATACAGCATGCCTGATATTGTATGGTAACTTGAAGCTT  400

seq1  GTATTGTAATAAATGCAGGAAAAAAAATGAGCACCATCACCCACACAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGTAATAAATGCAGGAAAAAAAATGAGCACCATCACCCACACAATA  450

seq1  TTGTCTGATTCTCAACTGGGGATGTAATATGAAAAGTTCCTACAATCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGATTCTCAACTGGGGATGTAATATGAAAAGTTCCTACAATCTTC  500

seq1  TCCTCCCCTAGCTTCCTATTTTTTGAGACAGAAGATTCTCTGTGTAGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCCTAGCTTCCTATTTTTTGAGACAGAAGATTCTCTGTGTAGGCA  550

seq1  TGGCTGTCTTGAAACTGACTCTGTAGACCAGGCTGTCCTGGAATTTAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTCTTGAAACTGACTCTGTAGACCAGGCTGTCCTGGAATTTAGAG  600

seq1  ATCTGACTCTGCCAGCCTCTCCTTCAAAGTGCTAGGATTAAAGACAAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGACTCTGCCAGCCTCTCCTTCAAAGTGCTAGGATTAAAGACAAGAG  650

seq1  CCATCACACCCAGCCCCATGTTCTCTTTTTTGCTTCGGTTCTCTCAGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACACCCAGCCCCATGTTCTCTTTTTTGCTTCGGTTCTCTCAGGCT  700

seq1  ACAGCACTATACACAATACATTGAACTTTTAGCTGGTATAATCATTTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACTATACACAATACATTGAACTTTTAGCTGGTATAATCATTTCCT  750

seq1  TTGTCACATTACTGAATGTCACTGTATGTATCTCAGAAGAAAACCCTGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACATTACTGAATGTCACTGTATGTATCTCAGAAGAAAACCCTGAC  800

seq1  TATTTTTTCTTTATATGGCTATCTTTTCAAATATCTTGAATTCATGGTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTCTTTATATGGCTATCTTTTCAAATATCTTGAATTCATGGTAT  850

seq1  ATAAACACTGCTCAGGAACTTAAGAGAAT-GGTATTGTTAGTTATGAAAA  899
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATAAACACTGCTCAGGAACTTAAGAGAATGGGTATTGTTAGTTATGAAAA  900

seq1  TCTTTTCTGCTAATGCTGCCCTTTCTGTCTCTTCTGGACTACAATAGTGT  949
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCTTTTCTGCTAATGCTG-CCTTTCTGTCTCTTCTGGACTACAATAGTGT  949

seq1  GGCAAATTGAATAGGAATCTCAGGA-TATTTAGGGACTTTAACAAGTTGA  998
      ||| ||||||||| || |||||||| |||||| ||||||| || ||||||
seq2  GGC-AATTGAATA-GATTCTCAGGATTATTTA-GGACTTTTAC-AGTTGA  995

seq1  TAGTGACAAAAAAAAATTTATTTTCTTTGATAAAATGTTGTTCTTGCCCT  1048
      ||||||| |||||||||||| |||||||||| |||||||||||||| |||
seq2  TAGTGAC-AAAAAAAATTTA-TTTCTTTGAT-AAATGTTGTTCTTG-CCT  1041

seq1  TAACCCCACTTACATTTGGTCTTTTAGAAGTGATAAGCTTCTGCATATAG  1098
      ||  |||||||||| ||| || ||||| |||||| ||| |||||||||||
seq2  TA--CCCACTTACA-TTGATC-TTTAG-AGTGAT-AGC-TCTGCATATAG  1084

seq1  A  1099
      |
seq2  A  1085