BAC Information

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BAC

Clone NameB6Ng01-308J23
Chromosome15 (Build37)
Map Location 89,399,239 - 89,400,391
singlet/doubletsinglet
Overlap geneAcr
Upstream geneZdhhc25, Brd1, Zbed4, Alg12, Creld2, Pim3, 1700019P01Rik, Mlc1, LOC667558, Mov10l1, Panx2, Trabd, 1300018J18Rik, Hdac10, Mapk12, Mapk11, Plxnb2, LOC100043185, 1700027J05Rik, Saps2, Sbf1, Adm2, Miox, Tmem112b, Ncaph2, Ecgf1, 2010001J22Rik, Klhdc7b, 1700007E06Rik, Cpt1b, Chkb, C730034F03Rik, Mapk8ip2, Arsa, Shank3
Downstream geneRabl2a, LOC676575, Syt10, Alg10b, Cpne8, EG627342
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308J23.bB6Ng01-308J23.g
ACCGA101073GA101074
length1,1511,191
definitionB6Ng01-308J23.b B6Ng01-308J23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaggcatcatatgcctttgcatctctgtccacccaaagactct
catccctaagggactcaatgcaaacaactccaaaactctaggtagccttt
cccctgtgatacgttcctagaacttccagctcaggatcccccccccccca
atgcttaggggacactgtattagcttgaaattatttgcagtttttttctc
cagacccagatccacagctccacaacctcctgagtcatgtgacacttgct
tgggtctcccatccaagattggtcctgaaaaaccattagacctccactcc
atagcatttttgactaccactgtgtccagggtttcccgtcaatacctcta
gggcccatctagatatttcctggagactgtgacctcctgcataccttagg
ctgcctctcctaccctaaagctccccgccccatctttcccaaccctgtgt
ccctgcctccccccaggtgtggaggtacaaagactggatggctcttcttg
atttgagcagtttcctggtctctcctcagtggtccctgtgggttacgatt
caggcagaactcacaagcaggtacccggattgtcagtgggcagagtgcgc
agcttggggcctggccctggatggtcagcttacagatcttcacgtcccat
aacagccgcaggtaccacgcctgtggaggcagcctcctgaactcccactg
ggtgctcacagctgcccactgcttcgataacaaaaagtaagtgtggggct
cagagagggaggtctctagggtactctgaatggaaagggaaatttccccc
agggggctatgcccagggtctctgtggagctctggggccatgtggttacc
agactctgaccgagctccgaggtacaccacaggctttcctctggccagtc
tgtgaatgagtccgactggcgcacctttgtctccctcagaaaagtctatg
actggagactggttttcggagccacagaaatcgaatatggaggaaacaag
ccagtgaagagcctcagcaggagagatatgtgcagagattgtcatccatg
agaaatacaacgtactgacggaaggaaatgacttgcgctcttggaagatc
actcctcctgtacatgtgggaacctcaattggacctgctgtcctactcat
t
gaattctttctttagctctgagacccttttttttaatggggttatctgat
tttctggaatccaccttcttgagttctttatatatattggataatagtcc
cctatctgatttaggataggtaaagatcctttcccaatcttggtggactt
tttgtcttattgacagtgtcttttgacttacagaagctttgcaattttat
gaggtcccatttgtcaattctcaatcttacagcacaagccattgctgttc
tattcaggaatttttcccctgtgcccatatcttcgaggcttttccctcac
tttctcctctataagtttcagtgtctctggttttatgtggagtttcttaa
tccacttagatttgaccttaatacaaggagataggaatggatcaattctc
attcttggacatgataaccaccagttgtgccagcaccatttgttgaaaat
gctatcttttttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttaaattctattccattgg
tctacttgtctgtcactataccagtaccatgcagtttttatcacaattgc
tttgtagtacagcattaggtcaggcatggtaattccaccagaggttcttt
tatccatgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcagattgctctttctaatacgttgaagaattgagttggaatttt
gataggcattgcattgaatctgtagattgcttttggcaagatagacactt
ttactatattgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttccttcttcagagacttgaagttcttatcata
cagatcattcaccttccttagttagagtcatgccaaggtattttatatta
tttgtgactatggagaaaggtgttgttcctaatttcattcttcaggcctg
tttattctttgtgtagaagaaggccattggacttttttgagttaaatttt
atattccagctactcacgaagcttgtttatcaaggttagggaagtctctg
ggtgtttttacggtcacttataattcctatcattcactcgcaaaaggtat
atttggacctcttccttttccagcagttggatatgccccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_89399239_89400391
seq2: B6Ng01-308J23.b_48_1198

seq1  GAATTCAAAGGCATCATATGCCTTTGCATCTCTGTCCACCCAAAGACTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGGCATCATATGCCTTTGCATCTCTGTCCACCCAAAGACTCT  50

seq1  CATCCCTAAGGGACTCAATGCAAACAACTCCAAAACTCTAGGTAGCCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTAAGGGACTCAATGCAAACAACTCCAAAACTCTAGGTAGCCTTT  100

seq1  CCCCTGTGATACGTTCCTAGAACTTCCAGCTCAGGATCCCCCCCCCCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGTGATACGTTCCTAGAACTTCCAGCTCAGGATCCCCCCCCCCCCA  150

seq1  ATGCTTAGGGGACACTGTATTAGCTTGAAATTATTTGCAGTTTTTTTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTAGGGGACACTGTATTAGCTTGAAATTATTTGCAGTTTTTTTCTC  200

seq1  CAGACCCAGATCCACAGCTCCACAACCTCCTGAGTCATGTGACACTTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCCAGATCCACAGCTCCACAACCTCCTGAGTCATGTGACACTTGCT  250

seq1  TGGGTCTCCCATCCAAGATTGGTCCTGAAAAACCATTAGACCTCCACTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTCCCATCCAAGATTGGTCCTGAAAAACCATTAGACCTCCACTCC  300

seq1  ATAGCATTTTTGACTACCACTGTGTCCAGGGTTTCCCGTCAATACCTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATTTTTGACTACCACTGTGTCCAGGGTTTCCCGTCAATACCTCTA  350

seq1  GGGCCCATCTAGATATTTCCTGGAGACTGTGACCTCCTGCATACCTTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCATCTAGATATTTCCTGGAGACTGTGACCTCCTGCATACCTTAGG  400

seq1  CTGCCTCTCCTACCCTAAAGCTCCCCGCCCCATCTTTCCCAACCCTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCTCCTACCCTAAAGCTCCCCGCCCCATCTTTCCCAACCCTGTGT  450

seq1  CCCTGCCTCCCCCCAGGTGTGGAGGTACAAAGACTGGATGGCTCTTCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCTCCCCCCAGGTGTGGAGGTACAAAGACTGGATGGCTCTTCTTG  500

seq1  ATTTGAGCAGTTTCCTGGTCTCTCCTCAGTGGTCCCTGTGGGTTACGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGCAGTTTCCTGGTCTCTCCTCAGTGGTCCCTGTGGGTTACGATT  550

seq1  CAGGCAGAACTCACAAGCAGGTACCCGGATTGTCAGTGGGCAGAGTGCGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGAACTCACAAGCAGGTACCCGGATTGTCAGTGGGCAGAGTGCGC  600

seq1  AGCTTGGGGCCTGGCCCTGGATGGTCAGCTTACAGATCTTCACGTCCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGGGGCCTGGCCCTGGATGGTCAGCTTACAGATCTTCACGTCCCAT  650

seq1  AACAGCCGCAGGTACCACGCCTGTGGAGGCAGCCTCCTGAACTCCCACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCGCAGGTACCACGCCTGTGGAGGCAGCCTCCTGAACTCCCACTG  700

seq1  GGTGCTCACAGCTGCCCACTGCTTCGATAACAAAAAGTAAGTGTGGGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTCACAGCTGCCCACTGCTTCGATAACAAAAAGTAAGTGTGGGGCT  750

seq1  CAGAGAGGGAGGTCTCTAGGGTACTCTGAATGGAAAGGGAAATTTCCCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGGGAGGTCTCTAGGGTACTCTGAATGGAAAGGGAAATTTCCCCC  800

seq1  AGGGGGCTATGCCCAGGGTCTCTGTGGAGCTCTGGGGCCATGTGGTTACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGCTATGCCCAGGGTCTCTGTGGAGCTCTGGGGCCATGTGGTTACC  850

seq1  AGACTCTGACCGAGCTCCGAGGTACACCACAGGCTTTCCTCTGGCCAGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTGACCGAGCTCCGAGGTACACCACAGGCTTTCCTCTGGCCAGTC  900

seq1  TGTGAATGAGTCCGACTGGCGCACCTTTGTCT-CCTCAGAAAAGTCTATG  949
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGTGAATGAGTCCGACTGGCGCACCTTTGTCTCCCTCAGAAAAGTCTATG  950

seq1  ACTGGAGACTGGTTTTCGGAGCACAAGAAATCGAATATGGAAGAAACAAG  999
      ||||||||||||||||||||||   |||||||||||||||| ||||||||
seq2  ACTGGAGACTGGTTTTCGGAGCCACAGAAATCGAATATGGAGGAAACAAG  1000

seq1  CCAGTGAAAGAGCCCCAGCAGGAGAGATATGTGCAGAAGATTGTCATCCA  1049
      |||||| ||||||| ||||||||||||||||||||| |||||||||||||
seq2  CCAGTG-AAGAGCCTCAGCAGGAGAGATATGTGCAG-AGATTGTCATCCA  1048

seq1  TGAGAAATACAACGTAGTGACGGAGGGAAATGACATTGCGCTCTT-GAAG  1098
      |||||||||||||||| ||||||| ||||||||| |||||||||| ||||
seq2  TGAGAAATACAACGTACTGACGGAAGGAAATGAC-TTGCGCTCTTGGAAG  1097

seq1  ATCACTCCTCCTGTTACATGTGGGAACTTC-ATTGGACCCTGCTGTCTAC  1147
      ||||||||||||| ||||||||||||| || |||||| |||||||||   
seq2  ATCACTCCTCCTG-TACATGTGGGAACCTCAATTGGA-CCTGCTGTCCTA  1145

seq1  CTCATT  1153
      ||||||
seq2  CTCATT  1151