BAC Information

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BAC

Clone NameB6Ng01-308K04
Chromosome15 (Build37)
Map Location 65,941,063 - 66,094,684
singlet/doubletdoublet
Overlap geneKcnq3
Upstream geneLOC100040790, LOC665836, C920006C10Rik, Oc90, F930104E18Rik, LOC100040835
Downstream geneLrrc6, LOC100040860, Tmem71, LOC100040881, Phf20l1, Tg, Sla, Wisp1, Ndrg1, LOC100040667, St3gal1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308K04.bB6Ng01-308K04.g
ACCGA101083GA101084
length1,0171,119
definitionB6Ng01-308K04.b B6Ng01-308K04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,094,096 - 66,094,684)(65,941,063 - 65,942,181)
sequence
gaattcctgtgaaagtcccagcgaaggtccagggagaaatgaccttgaag
attgtcctgaatttcatggtccctggttggtgcggatgagtcactagata
ctgaaggaggtactctgcttgctttcagttataacctcatctgcgtttgc
tggaagaatcctgggcactgattactcattactttcatcttccatgaaag
gcactggctcaggacgagtgacagtcaccatacaatgtgggcatggtgac
acatacctgtaattcctgctcttgggaggtggaggcaaggctatcagaaa
cagtagctcagtatgggaagatcattcagtagcgtgatcctaggatccca
tcctatcccacagctaaagaagcagggataagtggtccctgggcatcact
agtttgccagcctagtctatatgctgaccacaagcacagtggggcatgtg
tgcccctgccctccaaaccaatatctatctgtctgtctgtctatgaaaaa
tttaaaagtctccatatgcaataaatgcaaaatccatgacatttctataa
aatacaagagagctgaaataaggaaatgaaaatatttttgcctgcctgca
gaagatttgtttcctgtgattcccgaactggtgtttgcatagcttctttc
tgtccattggaagggaacctacagtcttatctgaagtgacttaaagaagg
cagaattgcacactggtgctgtcagctttctttatagatgacagcagcaa
actttgaaaggacagcttaaaatattccatatggattgagatatggagca
ataaatgctaaaattctcagtgatggaggtctacatgaacaaatttaaat
acttggcaaaagtcttcaattaaagtcacgtggctcctccttcggtgtgt
gagggtggctgatttccaaatgtaagtattgttttagaaactattgacaa
ttctagtgggtactgcctagcagagtgaaacttctccaaatgcaagctaa
ttaaaaactgtctcaga
gaattcttagggatcctgtttaactcaccaacatactaagcatatctgga
tttccttttctattatctccctgaaaggctcggtgttgtattttacattt
agttttgccaccaactctcagttgctattttgtgacatctgtataaactg
tgactggacctgtcactgcatgtgaatacacagccatttcgtgtcatgtg
ggggtggagggggacccacctctcctctctgtagtattgcctttgataga
atctatgtttctaatatgctcttttgtgagttctggtacattggctgaag
gaccacattttgagaaacactgcttttaacacattgtcttgcttttgcta
gtggatatgagtattaaaacaaccaaccctctgttccttgttgctagttg
ggctttatgtcagaaaccatctcttactgacagcatgaagaattacccaa
agcaaggagtaaatctgcccttccctgctgggctgtgagcttttgatgac
aagcttccagttttgatagtccttgcatgtatgtcccctgactcctctct
ggcacaaccaaacttcacgaaagagcagtgctgaatcagggctcaataaa
ctcttgtcaaaatgaacatttgttttctgcattctgtttacatatgattg
tgcgacaggttcacaggacaaggcagcaggatcctgctcctgtctggtct
acaccccttccccactaaaaacaaagcatctttaaaaggcttagctctgc
tccaaagtttgcacacatcctgctttctatgaggaccaacttcctgaact
ttcccactctctaactgaaacacctgcagcttccctaagagttctaagct
gcataatttctttttcagcagaaaaaaaaattttaactttaattttaatt
tcttcagcagattttattattcagctttgcttaagtaatcaagaaacttt
aacgctcacaccataattctggcaaatgggtgtggaccactgacagattg
gaaataggtagattcgaaaaggccacttactaaaatacccaattgagatt
ctccactttccaacactaatgaagagacttcctgtcctttacggactcct
aggcaagtcacttcttaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_66094096_66094684
seq2: B6Ng01-308K04.b_43_631 (reverse)

seq1  AAAAATATTTTCATTTCCTTATTTCAGCTCTCTTGTATTTTATAGAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATTTTCATTTCCTTATTTCAGCTCTCTTGTATTTTATAGAAATG  50

seq1  TCATGGATTTTGCATTTATTGCATATGGAGACTTTTAAATTTTTCATAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGATTTTGCATTTATTGCATATGGAGACTTTTAAATTTTTCATAGA  100

seq1  CAGACAGACAGATAGATATTGGTTTGGAGGGCAGGGGCACACATGCCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGACAGATAGATATTGGTTTGGAGGGCAGGGGCACACATGCCCCA  150

seq1  CTGTGCTTGTGGTCAGCATATAGACTAGGCTGGCAAACTAGTGATGCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTTGTGGTCAGCATATAGACTAGGCTGGCAAACTAGTGATGCCCA  200

seq1  GGGACCACTTATCCCTGCTTCTTTAGCTGTGGGATAGGATGGGATCCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCACTTATCCCTGCTTCTTTAGCTGTGGGATAGGATGGGATCCTAG  250

seq1  GATCACGCTACTGAATGATCTTCCCATACTGAGCTACTGTTTCTGATAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACGCTACTGAATGATCTTCCCATACTGAGCTACTGTTTCTGATAGC  300

seq1  CTTGCCTCCACCTCCCAAGAGCAGGAATTACAGGTATGTGTCACCATGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTCCACCTCCCAAGAGCAGGAATTACAGGTATGTGTCACCATGCC  350

seq1  CACATTGTATGGTGACTGTCACTCGTCCTGAGCCAGTGCCTTTCATGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTGTATGGTGACTGTCACTCGTCCTGAGCCAGTGCCTTTCATGGAA  400

seq1  GATGAAAGTAATGAGTAATCAGTGCCCAGGATTCTTCCAGCAAACGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAAGTAATGAGTAATCAGTGCCCAGGATTCTTCCAGCAAACGCAGA  450

seq1  TGAGGTTATAACTGAAAGCAAGCAGAGTACCTCCTTCAGTATCTAGTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTATAACTGAAAGCAAGCAGAGTACCTCCTTCAGTATCTAGTGAC  500

seq1  TCATCCGCACCAACCAGGGACCATGAAATTCAGGACAATCTTCAAGGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCGCACCAACCAGGGACCATGAAATTCAGGACAATCTTCAAGGTCA  550

seq1  TTTCTCCCTGGACCTTCGCTGGGACTTTCACAGGAATTC  589
      |||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCCTGGACCTTCGCTGGGACTTTCACAGGAATTC  589

seq1: chr15_65941063_65942181
seq2: B6Ng01-308K04.g_68_1186

seq1  GAATTCTTAGGGATCCTGTTTAACTCACCAACATACTAAGCATATCTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGGGATCCTGTTTAACTCACCAACATACTAAGCATATCTGGA  50

seq1  TTTCCTTTTCTATTATCTCCCTGAAAGGCTCGGTGTTGTATTTTACATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTTCTATTATCTCCCTGAAAGGCTCGGTGTTGTATTTTACATTT  100

seq1  AGTTTTGCCACCAACTCTCAGTTGCTATTTTGTGACATCTGTATAAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGCCACCAACTCTCAGTTGCTATTTTGTGACATCTGTATAAACTG  150

seq1  TGACTGGACCTGTCACTGCATGTGAATACACAGCCATTTCGTGTCATGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGGACCTGTCACTGCATGTGAATACACAGCCATTTCGTGTCATGTG  200

seq1  GGGGTGGAGGGGGACCCACCTCTCCTCTCTGTAGTATTGCCTTTGATAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGAGGGGGACCCACCTCTCCTCTCTGTAGTATTGCCTTTGATAGA  250

seq1  ATCTATGTTTCTAATATGCTCTTTTGTGAGTTCTGGTACATTGGCTGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATGTTTCTAATATGCTCTTTTGTGAGTTCTGGTACATTGGCTGAAG  300

seq1  GACCACATTTTGAGAAACACTGCTTTTAACACATTGTCTTGCTTTTGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACATTTTGAGAAACACTGCTTTTAACACATTGTCTTGCTTTTGCTA  350

seq1  GTGGATATGAGTATTAAAACAACCAACCCTCTGTTCCTTGTTGCTAGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATATGAGTATTAAAACAACCAACCCTCTGTTCCTTGTTGCTAGTTG  400

seq1  GGCTTTATGTCAGAAACCATCTCTTACTGACAGCATGAAGAATTACCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTATGTCAGAAACCATCTCTTACTGACAGCATGAAGAATTACCCAA  450

seq1  AGCAAGGAGTAAATCTGCCCTTCCCTGCTGGGCTGTGAGCTTTTGATGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGAGTAAATCTGCCCTTCCCTGCTGGGCTGTGAGCTTTTGATGAC  500

seq1  AAGCTTCCAGTTTTGATAGTCCTTGCATGTATGTCCCCTGACTCCTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCCAGTTTTGATAGTCCTTGCATGTATGTCCCCTGACTCCTCTCT  550

seq1  GGCACAACCAAACTTCACGAAAGAGCAGTGCTGAATCAGGGCTCAATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAACCAAACTTCACGAAAGAGCAGTGCTGAATCAGGGCTCAATAAA  600

seq1  CTCTTGTCAAAATGAACATTTGTTTTCTGCATTCTGTTTACATATGATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTCAAAATGAACATTTGTTTTCTGCATTCTGTTTACATATGATTG  650

seq1  TGCGACAGGTTCACAGGACAAGGCAGCAGGATCCTGCTCCTGTCTGGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGACAGGTTCACAGGACAAGGCAGCAGGATCCTGCTCCTGTCTGGTCT  700

seq1  ACACCCCTTCCCCACT-AAAACAAAGCATCTTTAAAAGGCTTAGCTCTGC  749
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACACCCCTTCCCCACTAAAAACAAAGCATCTTTAAAAGGCTTAGCTCTGC  750

seq1  TCCAAAGTTTGCACACATCCTGCTTTCTATGAGGACCAACTTCCTGAACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGTTTGCACACATCCTGCTTTCTATGAGGACCAACTTCCTGAACT  800

seq1  TTCCCACTCTCTAACTGAAACACCTGCAGCTTCCCTAAGAGTTCTAAGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACTCTCTAACTGAAACACCTGCAGCTTCCCTAAGAGTTCTAAGCT  850

seq1  GCATAATTTCTTTTTCAGCAGAAAAAAAAA-TTTAACTTTAATTTTAATT  898
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GCATAATTTCTTTTTCAGCAGAAAAAAAAATTTTAACTTTAATTTTAATT  900

seq1  TCTTCAGCAGATTTTATTATTCAGCTTTGCTTAAGTAATCAAGAAACTTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGCAGATTTTATTATTCAGCTTTGCTTAAGTAATCAAGAAACTTT  950

seq1  AAACGCTCACACCATAATTCTGGCAAATGGGTGTGGA-CACTGACAGATT  997
       |||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  -AACGCTCACACCATAATTCTGGCAAATGGGTGTGGACCACTGACAGATT  999

seq1  GGAAATAGGTAGATTCGAAAAGGCCACTTACTAAAATACCAAATTAAGAA  1047
      |||||||||||||||||||||||||||||||||||||||| |||| || |
seq2  GGAAATAGGTAGATTCGAAAAGGCCACTTACTAAAATACCCAATTGAG-A  1048

seq1  TTCTCCACTTTCCAACACTATGAAAGAGGACTT-CTGT-CTTTACGGGCT  1095
      ||||||||||||||||||||   |||| ||||| |||| |||||||| ||
seq2  TTCTCCACTTTCCAACACTAATGAAGA-GACTTCCTGTCCTTTACGGACT  1097

seq1  CCTAGGCAAAGGCACTTCCTTACA  1119
      ||||||| ||| ||||| ||||||
seq2  CCTAGGC-AAGTCACTT-CTTACA  1119