BAC Information

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BAC

Clone NameB6Ng01-309N20
Chromosome15 (Build37)
Map Location 20,691,451 - 20,692,419
singlet/doubletsinglet
Overlap genenone
Upstream geneAcot10, LOC100040302
Downstream geneCdh12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309N20.bB6Ng01-309N20.g
ACCGA101998GA101999
length1,1221,158
definitionB6Ng01-309N20.b B6Ng01-309N20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattggccttaacaaggccacacttatgattgtctctgatgcctg
tgtcctgactggatctagatgaaaaaccaagatatcaggagttcaggcag
gtctgttcagcatgtctgacaatgaaattcaccaagtctgtatattctgt
aatatataaatttcaaaacaaagctttagtatcatcaagataaccttttg
gttttattgtctgggatctagttcttgagggggtctccctctatcaaatc
tgatccatatcaggtgtaaataccttaatcaccttttccaaaaacacaaa
gacaaaaccttttccccaagtcagcatatccttccatctgtaatcaggaa
aacctgtagcttgtaccctatcccagaggaacaattaaacaaccacaata
ctcaaaatcacactcattttagcctacgtaggactttctaatttgtcatg
tcaggatattaacccaaaattcccatggaatccacattagagaacatgag
tctcttgcagacattattataccatctttaaaacaattgatttacccttc
tatctatacctgcttataagaggcaacttgtcaaaccaggatttaaaccc
aaaattcccttggacacatgttagacacaatatgagaatcctgtaagact
tgttagagaaatatatctttataccatctttaaagcaattaattcaaact
tccattaatatctgcatataggaagcagatgtcttttaattgataagctc
tctgcctagagcagccatcctgttataccacctatctgttgtgatttcta
ccaggagctacagacatttatttaattaatacttattataatatctatct
gttatgctctctacctggagccacagacttctattaattaatacctgttc
attgcagtgattatcactgctctctctacttggagccagtgactaatatt
ccctatctagttctgaatcgcagtgaaatttcccattctttaagtactaa
tatctgcttacatttcttctcttttattatgaatgaattacctgggtctg
agtcgtttgtacctttgtcctccttgattccttattcaacaggaggagct
gaatggtagaaaagggtgtgtg
gaattctcacccgaggaataccgaaaggctgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagataaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaacccataagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gtccctcaacagaggaatggatacaaaaatgtggtacatttacacaatgg
aatactcctcagctattaaaaagaatgaatttacgaaattcctaggcaaa
tggttggacctggagggcatcatcctgagtgaggtaacccaatcacaaaa
gaactcaaatgaaatgtactcactgataaatggatattaacccagaaact
tagtatagcgagatataaggtacaatatgcaaaacatgaaactgaagaac
aacaacgaagaccaaagtgtggacactttgctcattcttagaattggaaa
caatcatccatggaaggagttacagagacaaagtttggagatgagacaaa
aggatggaccatctagagactgccatatccagggatccatcccataatta
gcctccaaaggatgacaccattgcatacactagcaagcctttgttgcaag
gatggtgatatagctgtcccttgtgagactaggccgggacctagcaaaca
cagaagtggaatgcttcacagtcaacttattggatggatcacagggcccc
ccaattggaggagctagagaaagtaatccaaagagctaagagtatctgca
acctctatccggaggacaacatatgaacttaaccagtacttcagaagctt
cttggactctgcttgcatattgttacaaagatgactctagtcggccactc
cctggaaaggaaggtcatggtcaggctaactttgtatgtcccatgcatca
ggagaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_20691451_20692419
seq2: B6Ng01-309N20.b_191_1167

seq1  TCTGTAATATATAAATTTCAAAACAAAGCTTTAGTATCATCAAGATAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAATATATAAATTTCAAAACAAAGCTTTAGTATCATCAAGATAACC  50

seq1  TTTTGGTTTTATTGTCTGGGATCTAGTTCTTGAGGGGGTCTCCCTCTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTTTTATTGTCTGGGATCTAGTTCTTGAGGGGGTCTCCCTCTATC  100

seq1  AAATCTGATCCATATCAGGTGTAAATACCTTAATCACCTTTTCCAAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGATCCATATCAGGTGTAAATACCTTAATCACCTTTTCCAAAAAC  150

seq1  ACAAAGACAAAACCTTTTCCCCAAGTCAGCATATCCTTCCATCTGTAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGACAAAACCTTTTCCCCAAGTCAGCATATCCTTCCATCTGTAATC  200

seq1  AGGAAAACCTGTAGCTTGTACCCTATCCCAGAGGAACAATTAAACAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAACCTGTAGCTTGTACCCTATCCCAGAGGAACAATTAAACAACCA  250

seq1  CAATACTCAAAATCACACTCATTTTAGCCTACGTAGGACTTTCTAATTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACTCAAAATCACACTCATTTTAGCCTACGTAGGACTTTCTAATTTG  300

seq1  TCATGTCAGGATATTAACCCAAAATTCCCATGGAATCCACATTAGAGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCAGGATATTAACCCAAAATTCCCATGGAATCCACATTAGAGAAC  350

seq1  ATGAGTCTCTTGCAGACATTATTATACCATCTTTAAAACAATTGATTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTCTCTTGCAGACATTATTATACCATCTTTAAAACAATTGATTTAC  400

seq1  CCTTCTATCTATACCTGCTTATAAGAGGCAACTTGTCAAACCAGGATTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTATCTATACCTGCTTATAAGAGGCAACTTGTCAAACCAGGATTTA  450

seq1  AACCCAAAATTCCCTTGGACACATGTTAGACACAATATGAGAATCCTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAAAATTCCCTTGGACACATGTTAGACACAATATGAGAATCCTGTA  500

seq1  AGACTTGTTAGAGAAATATATCTTTATACCATCTTTAAAGCAATTAATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGTTAGAGAAATATATCTTTATACCATCTTTAAAGCAATTAATTC  550

seq1  AAACTTCCATTAATATCTGCATATAGGAAGCAGATGTCTTTTAATTGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCCATTAATATCTGCATATAGGAAGCAGATGTCTTTTAATTGATA  600

seq1  AGCTCTCTGCCTAGAGCAGCCATCCTGTTATACCACCTATCTGTTGTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCTGCCTAGAGCAGCCATCCTGTTATACCACCTATCTGTTGTGAT  650

seq1  TTCTACCAGGAGCTACAGACATTTATTTAATTAATACTTATTATAATATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCAGGAGCTACAGACATTTATTTAATTAATACTTATTATAATATC  700

seq1  TATCTGTTATGCTCTCTACCTGGAGCCACAGACTTCTATTAATTAATACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTTATGCTCTCTACCTGGAGCCACAGACTTCTATTAATTAATACC  750

seq1  TGTTCATTGCAGGTGATTATCACTGCTCTCTCTACTTGGAGCCAGTGACT  800
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATTGCA-GTGATTATCACTGCTCTCTCTACTTGGAGCCAGTGACT  799

seq1  AATATTCCCTATCTAGTTCTGAATCGCAGGTGAAATTTCCCA-TCTTTAA  849
      |||||||||||||||||||||||||||| ||||||||||||| |||||||
seq2  AATATTCCCTATCTAGTTCTGAATCGCA-GTGAAATTTCCCATTCTTTAA  848

seq1  GTACT-ATATCTGCTTACATTTC-TCTCTTT--ATATGAATGAATTACCT  895
      ||||| ||||||||||||||||| |||||||   ||||||||||||||||
seq2  GTACTAATATCTGCTTACATTTCTTCTCTTTTATTATGAATGAATTACCT  898

seq1  -GGTCTGGAGCCCTTTGTACCTTTGT-CTCC-TGATTCTTTATTCACAGG  942
       ||||| ||| | ||||||||||||| |||| |||||| |||||||   |
seq2  GGGTCT-GAGTCGTTTGTACCTTTGTCCTCCTTGATTCCTTATTCAACAG  947

seq1  GAGGAGCTGAGT-GTAGAAA--GGTGTGTG  969
      |||||||||| | |||||||  ||||||||
seq2  GAGGAGCTGAATGGTAGAAAAGGGTGTGTG  977