BAC Information

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BAC

Clone NameB6Ng01-310G17
Chromosome15 (Build37)
Map Location 66,437,997 - 66,439,166
singlet/doubletsinglet
Overlap genePhf20l1
Upstream geneC920006C10Rik, Oc90, F930104E18Rik, LOC100040835, Kcnq3, Lrrc6, LOC100040860, Tmem71, LOC100040881
Downstream geneTg, Sla, Wisp1, Ndrg1, LOC100040667, St3gal1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310G17.bB6Ng01-310G17.g
ACCGA102401GA102402
length1,1731,222
definitionB6Ng01-310G17.b B6Ng01-310G17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaggaaaatgacacaaattaagttaactttaatcatttcaaat
acgtattctctgtagattagaaacaggttctactctaggagactgtctta
cagaatgcaagctatagcaccaggacattaaacagtgagcagaaggggaa
catcaagttaccatgaatcataacaccaaacaaaatcactccacaatgat
agccttcacggagaaacaggaggccagcactcccaggaatacaaaagggg
gtgctcaaagaacaatgaagttgaaatcttggtcaaaagtatgtgtcatg
agtaaatttaaatctcaggatttttttcaagttttgcaaaaatccctgac
atcacacaaacatttctaacttccagcaatgtccatgacaatgagagcgc
atcttgtctgaagtactattctttattcctttatgatatgtacaggtact
attttcatgtccactaacactcaatttgtttgcaacttgttactaaaagt
tatagattctgtgcaaagctgtctaccttaaaatgaatgttatgtatacc
atatgatagaactatcatgaaagcatattacatattcaaaaccaagcaga
atacaatttcatttctttctagttgcaaactttgaaaacatcatcccttt
atcattctttctataacaatcagcagaggatacatatgaggggaaacagt
gtatcatcacagagctaaacttacccagtgattggatcactaatctttgg
atagaccctacttaaaaatagagtggaaaaagaaaagtaaataacaaact
gctacaattcttgcccactcctccctagtaaaggacaaaaagacacaggt
agaacttggtaagtttaaaatatagcaagattccaacatgaatctgccat
tttacacaagttctcatttttcttcacagaccacaaatgaaatacactgt
acacaagcacaccaggattaggactgaagaaaatcctttatctactgtcc
tagataaaggacatggcataacttgttgaacatgaaatcaaaattaaagc
agagatgaactgcctaaaaggattgtgataaatttaaatctttctgagta
aataaagggggaaagaacctaatggctccatatggataaaaattctgtgt
actctggactaaccatttacatt
gaattctttataacccaatgggacaaggaattgttgagtgtgtgcatcac
cctctgaaaattggcttttaagtacaaaaaaagggggaattatatccccc
aaggtcactaaaagcacatcttgcttttgtcttatttgttttattattaa
tatttattattatttttacaaactgatgctaaaggtcagtttgcagcaga
tagccactggcatccagtcacttctagctcatatgccatggtcaaatggt
gggatccccatggaatggcccagatcccattttaatatgggggagaggtt
ctgtttgatttatttatttatttttcacaaaaagaagatggagcacgatg
gctgcctgaaagatggattcctcaagtggtcacatgttctgagtcttcta
gtaagtatgattccaattatgatgatggctaaaaatctttattagccagc
tgagttaatttcgagcatagccaccactatttcctgagaagtaacatttt
ttctgctgattctcaaatccacctcccccacactgggaggcaggaccttg
ggtctgatagttgctaatttgcaactgaattgagtgcctgggacatcccc
acagacaaccttaatcctgttgcatttaattttggattttgtatttcaag
cagatctgttacctccttacagcaaagctcagttatggaagttattcatc
tctctgaagagatgcattgagtgcatattgtggcttttgtctgaatggga
aaatggtgtgctatgagggctactgatgattctatgacttttatcaacct
aagacaggcatgtgcgaaaaggtcatgtttgttcataataaacactaaaa
ttccatgtttgtgcaaataaacacaaacaagctgcacgtgttcccgggac
aggtcagaaggagtacagacattcagacccaagccaggtgtggtcaccag
ccaccataattcccagagaggaccatggagcataggaaaattttatgcca
ccagtccagctaattttcaataaataaaaagggaggaaactgtgcccttc
cccacagcttgagctgactgacaagtcttctgaacctagatcagccagct
ggcttgctacattaacatctttctgtcagaagaacctggagaaacttgct
ggccactggactgctgaaagactggcttgcaacttcagttccagactata
aacaaatcctacaacgagaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_66437997_66439166
seq2: B6Ng01-310G17.b_44_1216 (reverse)

seq1  AATGT-AATGGTTAGTACCAGAGTAACACAGAA-TCTTATCCATATGAAG  48
      ||||| |||||||||| ||||||| |||||||| | ||||||||||| ||
seq2  AATGTAAATGGTTAGT-CCAGAGT-ACACAGAATTTTTATCCATATGGAG  48

seq1  CCATTAAGGTCTTTCCCCCCTTTATTTACTCAG-AAGATTTAAATTTATC  97
      |||||| | ||||| |||||||||||||||||| ||||||||||||||||
seq2  CCATTAGGTTCTTT-CCCCCTTTATTTACTCAGAAAGATTTAAATTTATC  97

seq1  ACAATCCTTTTA-GCAGTTCATCTCTGCTTTTATTTTTGATTTCATGT--  144
      |||||||||||| ||||||||||||||| |||| ||||||||||||||  
seq2  ACAATCCTTTTAGGCAGTTCATCTCTGC-TTTAATTTTGATTTCATGTTC  146

seq1  CACAAG-TATGCCATGTCCTTTATCTAGGACAGTAGATAAAGGATTTTCT  193
       ||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTTATGCCATGTCCTTTATCTAGGACAGTAGATAAAGGATTTTCT  196

seq1  TCAGTCCTAATCCTGGTGTGCTTGTGTACAGTGTATTTCATTTGTGGTCT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCCTAATCCTGGTGTGCTTGTGTACAGTGTATTTCATTTGTGGTCT  246

seq1  GTGAAGAAAAATGAGAACTTGTGTAAAATGGCAGATTCATGTTGGAATCT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAAAAATGAGAACTTGTGTAAAATGGCAGATTCATGTTGGAATCT  296

seq1  TGCTATATTTTAAACTTACCAAGTTCTACCTGTGTCTTTTTGTCCTTTAC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATATTTTAAACTTACCAAGTTCTACCTGTGTCTTTTTGTCCTTTAC  346

seq1  TAGGGAGGAGTGGGCAAGAATTGTAGCAGTTTGTTATTTACTTTTCTTTT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAGGAGTGGGCAAGAATTGTAGCAGTTTGTTATTTACTTTTCTTTT  396

seq1  TCCACTCTATTTTTAAGTAGGGTCTATCCAAAGATTAGTGATCCAATCAC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTCTATTTTTAAGTAGGGTCTATCCAAAGATTAGTGATCCAATCAC  446

seq1  TGGGTAAGTTTAGCTCTGTGATGATACACTGTTTCCCCTCATATGTATCC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAAGTTTAGCTCTGTGATGATACACTGTTTCCCCTCATATGTATCC  496

seq1  TCTGCTGATTGTTATAGAAAGAATGATAAAGGGATGATGTTTTCAAAGTT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGATTGTTATAGAAAGAATGATAAAGGGATGATGTTTTCAAAGTT  546

seq1  TGCAACTAGAAAGAAATGAAATTGTATTCTGCTTGGTTTTGAATATGTAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACTAGAAAGAAATGAAATTGTATTCTGCTTGGTTTTGAATATGTAA  596

seq1  TATGCTTTCATGATAGTTCTATCATATGGTATACATAACATTCATTTTAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTTCATGATAGTTCTATCATATGGTATACATAACATTCATTTTAA  646

seq1  GGTAGACAGCTTTGCACAGAATCTATAACTTTTAGTAACAAGTTGCAAAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGACAGCTTTGCACAGAATCTATAACTTTTAGTAACAAGTTGCAAAC  696

seq1  AAATTGAGTGTTAGTGGACATGAAAATAGTACCTGTACATATCATAAAGG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGAGTGTTAGTGGACATGAAAATAGTACCTGTACATATCATAAAGG  746

seq1  AATAAAGAATAGTACTTCAGACAAGATGCGCTCTCATTGTCATGGACATT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGAATAGTACTTCAGACAAGATGCGCTCTCATTGTCATGGACATT  796

seq1  GCTGGAAGTTAGAAATGTTTGTGTGATGTCAGGGATTTTTGCAAAACTTG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAAGTTAGAAATGTTTGTGTGATGTCAGGGATTTTTGCAAAACTTG  846

seq1  AAAAAAATCCTGAGATTTAAATTTACTCATGACACATACTTTTGACCAAG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATCCTGAGATTTAAATTTACTCATGACACATACTTTTGACCAAG  896

seq1  ATTTCAACTTCATTGTTCTTTGAGCACCCCCTTTTGTATTCCTGGGAGTG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAACTTCATTGTTCTTTGAGCACCCCCTTTTGTATTCCTGGGAGTG  946

seq1  CTGGCCTCCTGTTTCTCCGTGAAGGCTATCATTGTGGAGTGATTTTGTTT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTCCTGTTTCTCCGTGAAGGCTATCATTGTGGAGTGATTTTGTTT  996

seq1  GGTGTTATGATTCATGGTAACTTGATGTTCCCCTTCTGCTCACTGTTTAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTATGATTCATGGTAACTTGATGTTCCCCTTCTGCTCACTGTTTAA  1046

seq1  TGTCCTGGTGCTATAGCTTGCATTCTGTAAGACAGTCTCCTAGAGTAGAA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGGTGCTATAGCTTGCATTCTGTAAGACAGTCTCCTAGAGTAGAA  1096

seq1  CCTGTTTCTAATCTACAGAGAATACGTATTTGAAATGATTAAAGTTAACT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTCTAATCTACAGAGAATACGTATTTGAAATGATTAAAGTTAACT  1146

seq1  TAATTTGTGTCATTTTCCTTTGAATTC  1170
      |||||||||||||||||||||||||||
seq2  TAATTTGTGTCATTTTCCTTTGAATTC  1173