BAC Information

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BAC

Clone NameB6Ng01-311K04
Chromosome15 (Build37)
Map Location 93,442,318 - 93,443,457
singlet/doubletsinglet
Overlap genenone
Upstream genePdzrn4, LOC100042552, LOC100043283, Glt8d3, Yaf2, Zcrb1, Pphln1, LOC627623, Prickle1
Downstream geneZfp42-ps1, LOC100042627, LOC100042631, D630010B17Rik, Adamts20, Pus7l, Irak4, Twf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311K04.bB6Ng01-311K04.g
ACCGA103304GA103305
length1,1861,143
definitionB6Ng01-311K04.b B6Ng01-311K04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacagagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atgagagctagagaaaatagccaaggagctaaagggatctgcaaccctat
aggtggaacaacattatgagctaccagtaccccggagctcttgactctag
ctgcatatatatcaaaagaatgggccctagtcgtcatcactgaaagagag
gccattgaactgccaacttatatgcctcaagtacaggaatccagaccaaa
acggggattgcttggaccagggggcatgattggtga
gaattctctccttgggtttggaagtgtggattctgtatctctttaaaaaa
cgtaatatttgatcttggggaccctgggcagccgttttatactcatgaac
ggagagagcggcaccgcgctaagaaggaggtgggagagttgtaatgagcg
tctggcgctctcttctccccttctagccctctgctcctgcacttgggctt
tgggataaagtcatccatctgcccctctttgtgaccagagcgagtgagtg
gctttttaatggaaagacgacttcaagcatctctgtatccagacgcggct
gcaaaaagcagggcaaagcaacagacaaaaggacagaggtgtatacaaac
ggttgggaaactggaccgttcctttgttcctttctgggaagtttacagca
agcagagccctgagcggagactaaccaatgatgagcatgatatggccacg
gccggaaacgccaggagcgcatctatgtgagttttgagacggggtttctt
gcactccaggtctagccttggatttgctattgcagctaaggctgaccttc
tgtttctgatcctcctgcttgctaatgccaactgctgtgacctcaggtgc
tttcactgtgccctagaatcagcttttaagaggtgatgagtcacacttgg
aagtttcacctagagcctggtcctctccggcagatgaaacctggaatcag
atcctttcccaggacgcgaactcttggtgggagccagagatcatttatct
ctgaaatacgactcagggtgttttgaagtgtgtatatcaccattgttttg
catcgcaaagacggaagggaggactttgaaagttgtttcgaaaatcagca
tttcctttccctcttctgacacagataattatatgccactttgtggtgtg
acttactcagacaccattatgtttcaaacacaaaatattcttgtattttc
attattacaaaataacttgctgcttggtcagagccaagtttgggggggga
gccagcctgtctgctcccatgaaacacattctgctctgcttgtgcacatc
ctgtctcgatgaccatggatggggggactctccaatgtggctgaagcata
gctttctgtggggagggatctgtggagatggaatggttaactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_93442318_93443457
seq2: B6Ng01-311K04.g_67_1209

seq1  GAATTCTCTCCTTGGGTTTGGAAGTGTGGATTCTGTATCTCTTTAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCTTGGGTTTGGAAGTGTGGATTCTGTATCTCTTTAAAAAA  50

seq1  CGTAATATTTGATCTTGGGGACCCTGGGCAGCCGTTTTATACTCATGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAATATTTGATCTTGGGGACCCTGGGCAGCCGTTTTATACTCATGAAC  100

seq1  GGAGAGAGCGGCACCGCGCTAAGAAGGAGGTGGGAGAGTTGTAATGAGCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAGCGGCACCGCGCTAAGAAGGAGGTGGGAGAGTTGTAATGAGCG  150

seq1  TCTGGCGCTCTCTTCTCCCCTTCTAGCCCTCTGCTCCTGCACTTGGGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCGCTCTCTTCTCCCCTTCTAGCCCTCTGCTCCTGCACTTGGGCTT  200

seq1  TGGGATAAAGTCATCCATCTGCCCCTCTTTGTGACCAGAGCGAGTGAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATAAAGTCATCCATCTGCCCCTCTTTGTGACCAGAGCGAGTGAGTG  250

seq1  GCTTTTTAATGGAAAGACGACTTCAAGCATCTCTGTATCCAGACGCGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTAATGGAAAGACGACTTCAAGCATCTCTGTATCCAGACGCGGCT  300

seq1  GCAAAAAGCAGGGCAAAGCAACAGACAAAAGGACAGAGGTGTATACAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAAGCAGGGCAAAGCAACAGACAAAAGGACAGAGGTGTATACAAAC  350

seq1  GGTTGGGAAACTGGACCGTTCCTTTGTTCCTTTCTGGGAAGTTTACAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGGAAACTGGACCGTTCCTTTGTTCCTTTCTGGGAAGTTTACAGCA  400

seq1  AGCAGAGCCCTGAGCGGAGACTAACCAATGATGAGCATGATATGGCCACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGCCCTGAGCGGAGACTAACCAATGATGAGCATGATATGGCCACG  450

seq1  GCCGGAAACGCCAGGAGCGCATCTATGTGAGTTTTGAGACGGGGTTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGAAACGCCAGGAGCGCATCTATGTGAGTTTTGAGACGGGGTTTCTT  500

seq1  GCACTCCAGGTCTAGCCTTGGATTTGCTATTGCAGCTAAGGCTGACCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCCAGGTCTAGCCTTGGATTTGCTATTGCAGCTAAGGCTGACCTTC  550

seq1  TGTTTCTGATCCTCCTGCTTGCTAATGCCAACTGCTGTGACCTCAGGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTGATCCTCCTGCTTGCTAATGCCAACTGCTGTGACCTCAGGTGC  600

seq1  TTTCACTGTGCCCTAGAATCAGCTTTTAAGAGGTGATGAGTCACACTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTGTGCCCTAGAATCAGCTTTTAAGAGGTGATGAGTCACACTTGG  650

seq1  AAGTTTCACCTAGAGCCTGGTCCTCTCCGGCAGATGAAACCTGGAATCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCACCTAGAGCCTGGTCCTCTCCGGCAGATGAAACCTGGAATCAG  700

seq1  ATCCTTTCCCAGGACGCGAACTCTTGGTGGGAGCCAGAGATCATTTATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTCCCAGGACGCGAACTCTTGGTGGGAGCCAGAGATCATTTATCT  750

seq1  CTGAAATACGACTCAGGGTGTTTTGAAGTGTGTATATCACCATTGTTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATACGACTCAGGGTGTTTTGAAGTGTGTATATCACCATTGTTTTG  800

seq1  CATCGCAAAGACGGAAGGGAGGACTTTGAAAGTTGTTTCGAAAATCAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGCAAAGACGGAAGGGAGGACTTTGAAAGTTGTTTCGAAAATCAGCA  850

seq1  TTTCCTTTCCCTCTTCTGACACAGATAATTTATATGCCAC-TTGTGGTGT  899
      |||||||||||||||||||||||||||| ||||||||||| |||||||||
seq2  TTTCCTTTCCCTCTTCTGACACAGATAA-TTATATGCCACTTTGTGGTGT  899

seq1  GACTTACTCAGACACCATTATGTTTCAAACAC-AAATATTCTTGTATTTT  948
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GACTTACTCAGACACCATTATGTTTCAAACACAAAATATTCTTGTATTTT  949

seq1  CATTATTACAAAATAACTTGCTGCTT-GTCAGAGCCAAGTTT-TGGGGGG  996
      |||||||||||||||||||||||||| |||||||||||||||  ||||||
seq2  CATTATTACAAAATAACTTGCTGCTTGGTCAGAGCCAAGTTTGGGGGGGG  999

seq1  AGCCAGCCCTGTCTGCTTCCCATGAAACACATTTCTGCTCTGCCTTGTGC  1046
      |||||| ||||||||| |||||||||||||| |||||||||| |||||||
seq2  AGCCAG-CCTGTCTGC-TCCCATGAAACACA-TTCTGCTCTG-CTTGTGC  1045

seq1  CAACATTCTGTCTCCGTTGA-CATGGATTGGGGGACTCTTCATTGTGGCT  1095
        |||| |||||| || ||| ||||||| |||||||||| || |||||||
seq2  --ACATCCTGTCT-CGATGACCATGGATGGGGGGACTCTCCAATGTGGCT  1092

seq1  GAAGCATAGCTTTTTGTGGGGAGGGGTCT---GAGAT-GAATG--TAACT  1139
      ||||||||||||| ||||||||||| |||   ||||| |||||  |||||
seq2  GAAGCATAGCTTTCTGTGGGGAGGGATCTGTGGAGATGGAATGGTTAACT  1142

seq1  C  1140
      |
seq2  C  1143