BAC Information

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BAC

Clone NameB6Ng01-312D10
Chromosome15 (Build37)
Map Location 25,536,774 - 25,692,085
singlet/doubletdoublet
Overlap geneMyo10, LOC100040602
Upstream geneLOC100040492, LOC100040499, LOC100040529, 9230109A22Rik, 4930445E18Rik, Basp1, EG432939, LOC100040583
Downstream genePpia-ps15_175.1, 1810015C04Rik, Zfp622, AK162044, Fbxl7, LOC622531
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312D10.bB6Ng01-312D10.g
ACCGA103738GA103739
length1,146912
definitionB6Ng01-312D10.b B6Ng01-312D10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,690,943 - 25,692,085)(25,536,774 - 25,538,147)
sequence
gaattccagcgctagaaggcaaagcaggaagacctgattgatgcaagttc
aaggtctgcctggactaggtagaaaattccaagacagagaccttatcatt
aaaaagccccaaacaacaaaaagacccacagaaagaggatggaaatgata
atttattctaagtcagaccacagccccgcagaggctgacagaaggctcag
ccctctgtagaaatcccatctggaaaccctcagagagcagccttgggcgt
gatctaagggacccaaggcagccttttcatcccatgaaactaaacccgac
ctcaatgcattcattatcactaccatttctccagccaccatactgaacag
gtcacaagcccctctattcagactcactctgacaaatcatgctgagacat
acaaattaggagggcagctgtctctctttgctggcaaggacgcccacact
gctcattagaatgctgaatagccgcggatctcactgagtcacgctccaag
gttatgggccgagcaatgtgaacaggattcatagctagaaaaaggcagga
ctgaaacagggtatgtgggaacgagcaggcaaacactcttcaatgtccag
acctgaaatattgtcaactgagatctggaacgcttatgaatccatagcag
acaggacacactgcggcagccatctgcatcaccgagtaggtgataaccag
gaggatccacgttcacaagcccttgcttcttaggtgtttaaacgtcaagg
gtatttccaagcttctggaagattatgcttctaagaagcataatatagtt
aatatacagaggaaaacaaagggtttcagatatagacagacagacacata
cataaacgcatgcgcgcgcgccgcgcgcaccccccccccccccacaaatt
ggagctaagaagtctaataaattagctaaagaaagatgaaaacagcaact
tagaagaagtcaagcccaacacccagccaccaagcagagcggccatttgg
gagactaaaccctgtcctcagtgctaaaccccacagtccacagaagggag
ctaggccagggttgagtgctgccccttccatttcagggacaacactggga
tgagcacctcatttgcataaaaaatacaggctgagaaaaacctcag

gaattcagagtcccttgtccagtccccatccataatatatttctccctct
tccttcccaccacctcccccgacaaatgatccacgcagaagcagagttct
tgtattcctaacatcattggccacgcttttccctgtttacacgactctct
gcgcttatccaaacaccagctcagaggctgggtaagttttatgggtgccg
ctttttttgtttaaagtcctctgtccgtcctcgagtggtgatcagcacgc
tacgccttgctataggaaggtagtcagaagaaatccaaatggaattctgt
gcctcaaagggaaagcagtcaaagtaacagtgggaatttcccagaccaag
gccagtggccaggatcaaatagaagtgatgagggtgggaagggctgtggt
gtttgggggcaattctcatgcttccccaagctagaggctggagagagagc
accactcaccatgcccccatcccccgtcctaaggaaagggaccaacatca
gaatatccattgtatatgtccagcactattttagattacccactgtgtgt
caaacacttaggtgccttgaggatctcacataaaacacaggagcatgaga
agcaaaattattagagattcagttgcagagctgaaatgtcccactgtgaa
ctctgtcccatcttaccccgagctttgtggccttttgtgagtaaatatga
cagaacaaagagtgagggcttgggagaccattgaccaacggggacttggt
caatcgagctctttcttcctaagagcagaatgaacactcgttgacagtgg
ctgttagcatccaacactgtaacacaagcaaagcgttcagagccgtgccc
agctccgctctggcatctgctcacctgcttagtccctgatggtggtggtg
gtgggtgggatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_25690943_25692085
seq2: B6Ng01-312D10.b_46_1191 (reverse)

seq1  CTGA-GTTTTTCTCAG-CTGTA-TTTTTATGCAAATGAGGTTGCTTCATC  47
      |||| ||||||||||| ||||| ||||||||||||||||| ||| |||||
seq2  CTGAGGTTTTTCTCAGCCTGTATTTTTTATGCAAATGAGG-TGC-TCATC  48

seq1  TCAGGTTGTTGTCCCTGAAATGGGAAGGGGCAGCCACTCAAACCTGGCCT  97
       |||  ||||||||||||||| ||||||||||| ||||||| ||||||||
seq2  CCAG--TGTTGTCCCTGAAAT-GGAAGGGGCAG-CACTCAACCCTGGCCT  94

seq1  AGCTCC--TCTGT-GACTGT-GTGTTTAGCACTGAGGACA-GGTTTAGTC  142
      ||||||  ||||| |||||| | ||||||||||||||||| |||||||||
seq2  AGCTCCCTTCTGTGGACTGTGGGGTTTAGCACTGAGGACAGGGTTTAGTC  144

seq1  TCCCAAATGGCCGCTCTGCTTGGTGGCTGGGTGTTTGGCTTGACTTCTTC  192
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCCCAAATGGCCGCTCTGCTTGGTGGCTGGGTGTTGGGCTTGACTTCTTC  194

seq1  TAAGTTGCTGTTTTCATCTTTCTTTAGCTAATTTATTAGACTTCTTAGCT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTGCTGTTTTCATCTTTCTTTAGCTAATTTATTAGACTTCTTAGCT  244

seq1  CCAATTTGT-GGGGGGGGGGGGGTGCGCGCGGCGCGCGCGCATGCGTTTA  291
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTTGTGGGGGGGGGGGGGGTGCGCGCGGCGCGCGCGCATGCGTTTA  294

seq1  TGTATGTGTCTGTCTGTCTATATCTGAAACCCTTTGTTTTCCTCTGTATA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGTCTGTCTGTCTATATCTGAAACCCTTTGTTTTCCTCTGTATA  344

seq1  TTAACTATATTATGCTTCTTAGAAGCATAATCTTCCAGAAGCTTGGAAAT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTATATTATGCTTCTTAGAAGCATAATCTTCCAGAAGCTTGGAAAT  394

seq1  ACCCTTGACGTTTAAACACCTAAGAAGCAAGGGCTTGTGAACGTGGATCC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTGACGTTTAAACACCTAAGAAGCAAGGGCTTGTGAACGTGGATCC  444

seq1  TCCTGGTTATCACCTACTCGGTGATGCAGATGGCTGCCGCAGTGTGTCCT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGTTATCACCTACTCGGTGATGCAGATGGCTGCCGCAGTGTGTCCT  494

seq1  GTCTGCTATGGATTCATAAGCGTTCCAGATCTCAGTTGACAATATTTCAG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCTATGGATTCATAAGCGTTCCAGATCTCAGTTGACAATATTTCAG  544

seq1  GTCTGGACATTGAAGAGTGTTTGCCTGCTCGTTCCCACATACCCTGTTTC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGACATTGAAGAGTGTTTGCCTGCTCGTTCCCACATACCCTGTTTC  594

seq1  AGTCCTGCCTTTTTCTAGCTATGAATCCTGTTCACATTGCTCGGCCCATA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTGCCTTTTTCTAGCTATGAATCCTGTTCACATTGCTCGGCCCATA  644

seq1  ACCTTGGAGCGTGACTCAGTGAGATCCGCGGCTATTCAGCATTCTAATGA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGAGCGTGACTCAGTGAGATCCGCGGCTATTCAGCATTCTAATGA  694

seq1  GCAGTGTGGGCGTCCTTGCCAGCAAAGAGAGACAGCTGCCCTCCTAATTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGTGGGCGTCCTTGCCAGCAAAGAGAGACAGCTGCCCTCCTAATTT  744

seq1  GTATGTCTCAGCATGATTTGTCAGAGTGAGTCTGAATAGAGGGGCTTGTG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTCTCAGCATGATTTGTCAGAGTGAGTCTGAATAGAGGGGCTTGTG  794

seq1  ACCTGTTCAGTATGGTGGCTGGAGAAATGGTAGTGATAATGAATGCATTG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTTCAGTATGGTGGCTGGAGAAATGGTAGTGATAATGAATGCATTG  844

seq1  AGGTCGGGTTTAGTTTCATGGGATGAAAAGGCTGCCTTGGGTCCCTTAGA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCGGGTTTAGTTTCATGGGATGAAAAGGCTGCCTTGGGTCCCTTAGA  894

seq1  TCACGCCCAAGGCTGCTCTCTGAGGGTTTCCAGATGGGATTTCTACAGAG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGCCCAAGGCTGCTCTCTGAGGGTTTCCAGATGGGATTTCTACAGAG  944

seq1  GGCTGAGCCTTCTGTCAGCCTCTGCGGGGCTGTGGTCTGACTTAGAATAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGCCTTCTGTCAGCCTCTGCGGGGCTGTGGTCTGACTTAGAATAA  994

seq1  ATTATCATTTCCATCCTCTTTCTGTGGGTCTTTTTGTTGTTTGGGGCTTT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCATTTCCATCCTCTTTCTGTGGGTCTTTTTGTTGTTTGGGGCTTT  1044

seq1  TTAATGATAAGGTCTCTGTCTTGGAATTTTCTACCTAGTCCAGGCAGACC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGATAAGGTCTCTGTCTTGGAATTTTCTACCTAGTCCAGGCAGACC  1094

seq1  TTGAACTTGCATCAATCAGGTCTTCCTGCTTTGCCTTCTAGCGCTGGAAT  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTTGCATCAATCAGGTCTTCCTGCTTTGCCTTCTAGCGCTGGAAT  1144

seq1  TC  1143
      ||
seq2  TC  1146


seq1: chr15_25536774_25538147
seq2: B6Ng01-312D10.g_69_980

seq1  GAATTCAGAGTCCCTTGTCCAGTCCCCATCCATAATATATTTCTCCCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGTCCCTTGTCCAGTCCCCATCCATAATATATTTCTCCCTCT  50

seq1  TCCTTCCCACCACCTCCCCCGACAAATGATCCACGCAGAAGCAGAGTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCCACCACCTCCCCCGACAAATGATCCACGCAGAAGCAGAGTTCT  100

seq1  TGTATTCCTAACATCATTGGCCACGCTTTTCCCTGTTTACACGACTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCCTAACATCATTGGCCACGCTTTTCCCTGTTTACACGACTCTCT  150

seq1  GCGCTTATCCAAACACCAGCTCAGAGGCTGGGTAAGTTTTATGGGTGCCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTTATCCAAACACCAGCTCAGAGGCTGGGTAAGTTTTATGGGTGCCG  200

seq1  CTTTTTTTGTTTAAAGTCCTCTGTCCGTCCTCGAGTGGTGATCAGCACGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTGTTTAAAGTCCTCTGTCCGTCCTCGAGTGGTGATCAGCACGC  250

seq1  TACGCCTTGCTATAGGAAGGTAGTCAGAAGAAATCCAAATGGAATTCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCCTTGCTATAGGAAGGTAGTCAGAAGAAATCCAAATGGAATTCTGT  300

seq1  GCCTCAAAGGGAAAGCAGTCAAAGTAACAGTGGGAATTTCCCAGACCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAAAGGGAAAGCAGTCAAAGTAACAGTGGGAATTTCCCAGACCAAG  350

seq1  GCCAGTGGCCAGGATCAAATAGAAGTGATGAGGGTGGGAAGGGCTGTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTGGCCAGGATCAAATAGAAGTGATGAGGGTGGGAAGGGCTGTGGT  400

seq1  GTTTGGGGGCAATTCTCATGCTTCCCCAAGCTAGAGGCTGGAGAGAGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGGGGCAATTCTCATGCTTCCCCAAGCTAGAGGCTGGAGAGAGAGC  450

seq1  ACCACTCACCATGCCCCCATCCCCCGTCCTAAGGAAAGGGACCAACATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTCACCATGCCCCCATCCCCCGTCCTAAGGAAAGGGACCAACATCA  500

seq1  GAATATCCATTGTATATGTCCAGCACTATTTTAGATTACCCACTGTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCCATTGTATATGTCCAGCACTATTTTAGATTACCCACTGTGTGT  550

seq1  CAAACACTTAGGTGCCTTGAGGATCTCACATAAAACACAGGAGCATGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACTTAGGTGCCTTGAGGATCTCACATAAAACACAGGAGCATGAGA  600

seq1  AGCAAAATTATTAGAGATTCAGTTGCAGAGCTGAAATGTCCCACTGTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAATTATTAGAGATTCAGTTGCAGAGCTGAAATGTCCCACTGTGAA  650

seq1  CTCTGTCCCATCTTACCCCGAGCTTTGTGGCCTTTTGTGAGTAAATATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCCCATCTTACCCCGAGCTTTGTGGCCTTTTGTGAGTAAATATGA  700

seq1  CAGAACAAAGAGTGAGGGCTTGGGAGACCATTGACCAACGGGGACTTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACAAAGAGTGAGGGCTTGGGAGACCATTGACCAACGGGGACTTGGT  750

seq1  CAATCGAGCTCTTTCTTCCTAAGAGCAGAATGAACACTCGTTGACAGTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCGAGCTCTTTCTTCCTAAGAGCAGAATGAACACTCGTTGACAGTGG  800

seq1  CTGTTAGCATCCAACACTGTAACACAAGCAAAGCGTTCAGAGCCGTGCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAGCATCCAACACTGTAACACAAGCAAAGCGTTCAGAGCCGTGCCC  850

seq1  AGCTCCGCTCTGGCATCTGCTCACCTGCTTAGTCCCTGATGGTGGTGGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCGCTCTGGCATCTGCTCACCTGCTTAGTCCCTGATGGTGGTGGTG  900

seq1  GT-GGTGGGAGTGTTGTGACATTGCTTGACGAAGATTCTCACTTGAATGG  949
      || ||||||| |                                      
seq2  GTGGGTGGGATT--------------------------------------  912

seq1  TTTGATTAACAGGATGATTCCTCCTCATTGTTGCATCTGTGGCAGGATCA  999
                                                        
seq2  --------------------------------------------------  912

seq1  CTCTGTGTGCTGGGGATACTGTAGGAAATAAAATAGACACATCTATTGGC  1049
                                                        
seq2  --------------------------------------------------  912

seq1  TTAAGATCAGGAATGCAACTTTCTGCGGAAGATGGCAGACAGTAAGCTTG  1099
                                                        
seq2  --------------------------------------------------  912

seq1  GAGATACAGTAAACAAGTAGCCTGGATCAGCAAATCTCTCTGAGAGGAGC  1149
                                                        
seq2  --------------------------------------------------  912

seq1  AGAAGTAAATATTTAGTCCTTGCTGGTCAGGTCGGCTATCATGCCACAAG  1199
                                                        
seq2  --------------------------------------------------  912

seq1  GCATCCACATTCAACCTGTAAGTGAACAGGGATGGCAGGCATATCACACT  1249
                                                        
seq2  --------------------------------------------------  912

seq1  AACGTATCATTTCAACAAGCTTGGTGCAAGAGGTTACCCACGGGCCACTA  1299
                                                        
seq2  --------------------------------------------------  912

seq1  TTTGATGATGGGCACAGAAGACCATTTCAGTGAATCAGTGAATGATAAAT  1349
                                                        
seq2  --------------------------------------------------  912

seq1  ACTATGAATGGAATTGGGTGGGATT  1374
                               
seq2  -------------------------  912


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