This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
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BAC Information
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Search Result
BAC
Clone Name
B6Ng01-312I13
Chromosome
15 (Build37)
Map Location
48,298,305 - 48,491,512
singlet/doublet
doublet
Overlap gene
Csmd3
Upstream gene
LOC100039493
Downstream gene
EG665146
,
LOC100039600
,
LOC100039539
,
LOC665160
Link
Open Mouse BAC browser
Click to get alignment info.
name
LOC100039493
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100039493
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
pseudo
: _no_value
name
Csmd3
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:239420
MGI:2386403
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
EG665146
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:665146
MGI:3643004
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins
pseudo
: _no_value
name
LOC100039600
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100039600
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins
pseudo
: _no_value
name
LOC100039539
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100039539
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
pseudo
: _no_value
name
LOC665160
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:665160
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins
pseudo
: _no_value
name
Csmd3
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:124487116
GeneID:239420
MGI:2386403
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: CUB and Sushi multiple domains 3
transcript_id
: NM_001081391.1
name
Csmd3
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:124487117
GeneID:239420
MGI:2386403
definition
GO_component
: GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO_function
: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO_process
: GO:0005975 - carbohydrate metabolism [Evidence IEA]
codon_start
: 1
product
: CUB and Sushi multiple domains 3
protein_id
: NP_001074860.1
name
LOC100039493
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039493
definition
number
: 1
pseudo
: _no_value
name
LOC100039493
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039493
definition
number
: 2
pseudo
: _no_value
name
LOC100039493
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039493
definition
number
: 3
pseudo
: _no_value
name
LOC100039600
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039600
definition
number
: 1
pseudo
: _no_value
name
LOC100039539
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039539
definition
number
: 1
pseudo
: _no_value
name
LOC100039539
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039539
definition
number
: 2
pseudo
: _no_value
name
LOC100039539
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039539
definition
number
: 3
pseudo
: _no_value
name
LOC100039539
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039539
definition
number
: 4
pseudo
: _no_value
name
LOC100039539
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039539
definition
number
: 5
pseudo
: _no_value
name
LOC100039539
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039539
definition
number
: 6
pseudo
: _no_value
name
LOC665160
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:665160
definition
number
: 1
pseudo
: _no_value
name
EG665146
(CDS detail)
type
misc_RNA
link
vega
ensembl
MGI
NCBI
xref
GI:149266578
GeneID:665146
MGI:3643004
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins
product
: predicted gene, EG665146
pseudo
: _no_value
transcript_id
: XR_035659.1
clone name
MSMg01-392M07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-102E17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-351O21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-068D06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-431P11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-164P07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-337K03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-437O14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-356F13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-318K06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-450H10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-133G16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-495F05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-337B01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-477P20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-496H04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-360L05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-528H02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-124D22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-307F08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-274K24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-123N15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-052F08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-415K03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-275L08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-452M09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-313A01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-208G17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-166M08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-084I17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-170J11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-145N17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-545I17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-377F04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-127N20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-412O07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-302J01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-300J14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-118K20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-475N24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-102H07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-440I17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-120G13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-390K14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-324E22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-454P06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-475N23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-421N04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-353F20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-116P10
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-348M14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-299I15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-500F03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-418P04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-385P02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-522P14
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-354H18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-493M15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-401K23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-392A19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-192C22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-368J04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-423K18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-525C06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-362A20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-154H06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-459M17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-377M13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-051J06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-184G02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-289M22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-289K20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-530A15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-295C19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-344I24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-327G19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-436P04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-067P07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-063N06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-330J04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-055O02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-291L14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-108F05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-308O21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-111H22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-500O02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-479K09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-353C13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-344B20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-261F24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-260D19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-527O23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-366I03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-386O18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-260L04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-336B09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-189F10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-477B10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-313B03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-228A10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-226M17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-001J10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-311F07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-263L02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-326C05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-203D14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-030K03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-247I08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-185I15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-229N21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-008L23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-333O23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-242N16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-116E18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-146J17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-233M21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-246G21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-087B02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-289P16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-075K09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-216P13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-230N03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-220C20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-250D23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-247N09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-251F13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-077L19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-141H23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-062O03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-295M05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-263H09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-183B08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-260C04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-191A13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-131M22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-187H21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-211J17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-344D03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-290I20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-275J02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-110E18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-196F13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-338I19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-050J06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-039P07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-089L19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-052H03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-093O17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-100D19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-303K15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-036M23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-044H21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-224A01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-283E13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-196J14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-074K17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-251F09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-157G19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-171G15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-070H13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-092F06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-243E10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-312I13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-280O10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-341B20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-038A16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-345M19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-280L16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-163H12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-210D03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-120B03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-130N20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-192H17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-137B18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-122L11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-199E12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-216N05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-265G11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-122F21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-212K08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-064G09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-066E09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-215I07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-240M01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-249N15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-104E06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-100K03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-087E06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-274P17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-186F17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-263G09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-158D21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-092I09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-086L18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-150K02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-061E04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-185H08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-061K11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-072D10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-301O03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-147O14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-098M18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-026N15
singlet/doublet
singlet
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unique
clone name
B6Ng01-308F19
singlet/doublet
singlet
plural/unique
unique
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B6Ng01-213O20
singlet/doublet
singlet
plural/unique
unique
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B6Ng01-301C07
singlet/doublet
doublet
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unique
clone name
B6Ng01-322H16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-052M17
singlet/doublet
doublet
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unique
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B6Ng01-225K07
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singlet
plural/unique
unique
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B6Ng01-149O18
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singlet
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unique
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B6Ng01-210O21
singlet/doublet
doublet
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unique
clone name
B6Ng01-055A01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-318C01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-336E10
singlet/doublet
singlet
plural/unique
unique