BAC Information

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BAC

Clone NameB6Ng01-312O23
Chromosome15 (Build37)
Map Location 60,452,605 - 60,453,751
singlet/doubletsinglet
Overlap genenone
Upstream geneTrib1, LOC665602, EG632248, LOC665613, 4933412E24Rik, LOC100040266, LOC623048, LOC211832, LOC623094
Downstream geneEG632412, LOC100040311, D330050I23Rik, 9930014A18Rik, A1bg, LOC100040323
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312O23.bB6Ng01-312O23.g
ACCGA104282GA104283
length1,2071,169
definitionB6Ng01-312O23.b B6Ng01-312O23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaccatag
taattgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
aaacaaattggaaaggaggaagtcaaaatatcactttttgcagataatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaagcaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggct
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaagtct
ctgaataaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaatattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtggtaaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacaatggtgctggc
acactggttgtatcatgtagagaatgcgaatcgatccataacttatctct
gtactaaggtcaatctaaatggatcaaagaacttccacataaaacagaag
acactgaaacttatagagagaagtggggcaaggctgaagaattggcacag
ggtaaaattctgaacagaaacagcattgccttgtgctgtagatcgaaatg
catgacctatgaacctcaaggttcgcagccgaagaaactcggctctaatt
aggttca
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctggagttcaccttcttgagttctttatatatattggatattagtccc
ctatctgatttagaataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgatgttgtcttttgacaaggcacatttctaaaaactta
cttctttctcactttactccataggccttctgtagctcctacctgtattc
tattttttttcaccctccagagatttgtttctatcaatattggatcttgc
tatttatctggtttacagatgctgtccattcttctctgtgttccccaggc
tagctcacaaaagtccatagagccttgtttcacctgttctctcagttcta
tttctggccattgctggcttatctctcaagctcttgctttattctgaacc
tgttttccttttgcctacaaagcagtgttctatttgcctttcagatttgc
ccttggtatagattgacttcctttatttctatgctttcataacacaatgt
acttcctggtgagctcgtctctagctttgcagttttggtagaaaataagc
ttttgttattttagtgttttgttagtaaaaagagattgtattaccaagtt
tactgtatgtttagaaggatgttgtgtaaaatcaaattacaaagcatgga
aaatatgcctagtatcacttacactctattctctacacatttgatgtgat
aaataccaactttttattttccaaatctgttcccattttcaagacataag
aacctatgagtacaaccaacttttcttagctacttgtgtatattgactag
aaagtgaatagagaacgtgctccctatttctacttatagaacattgttct
acttatagaacattgtcagaggattcacatgaggtcttaaattttcctta
gaacagaaggaaagaaaaggaaatactcatggaacaagacaagaataatt
gctgatactgaatattgattgttcagtgggagggaatggtgaattccatt
agattcatcctgttttggtatacacccattaaaatgttgtgttctaaatt
ggaaaaaggttaacttagccgaagaaagagaaaatgccaacttaaaaaat
tgtgggagttgacaattcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_60452605_60453751
seq2: B6Ng01-312O23.g_70_1238 (reverse)

seq1  GGAATAGTCAACT--CACAATTTTT--AG-TAGCATTTT-TCTTCTTTTG  44
      ||||| |||||||  ||||||||||  || | ||||||| ||||  || |
seq2  GGAATTGTCAACTCCCACAATTTTTTAAGTTGGCATTTTCTCTTTCTTCG  50

seq1  GCT-AGTTAAC--TTTTTCAATT----AGACAACATTTTAA-ATGTGTAT  86
      ||| |||||||  |||| |||||    | ||||||||||||   ||||||
seq2  GCTAAGTTAACCTTTTTCCAATTTAGAACACAACATTTTAATGGGTGTAT  100

seq1  A-CAAAACAGAATG-ATCTAAT-GAAATCA-CATTCC--TCCACTGAAC-  129
      | |||||||| ||| ||||||| ||| ||| ||||||   ||||||||| 
seq2  ACCAAAACAGGATGAATCTAATGGAATTCACCATTCCCTCCCACTGAACA  150

seq1  ATCAATA-TCAGTATCAGCAATTA-TCTTGTCTTGTTCCATGAGTATTTC  177
      ||||||| |||||||||||||||| |||||||||||||||||||||||||
seq2  ATCAATATTCAGTATCAGCAATTATTCTTGTCTTGTTCCATGAGTATTTC  200

seq1  CTTTTCTTTCCCTTCTGTTCTAAGGAAAATTTAAGACCTCATGTGAATCC  227
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTT-CCTTCTGTTCTAAGGAAAATTTAAGACCTCATGTGAATCC  249

seq1  TCTGACAATGTTCTATAAGTAGAACAATGTTCTATAAGTAGAAATAGGGA  277
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACAATGTTCTATAAGTAGAACAATGTTCTATAAGTAGAAATAGGGA  299

seq1  GCACGTTCTCTATTCACTTTCTAGTCAATATACACAAGTAGCTAAGAAAA  327
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGTTCTCTATTCACTTTCTAGTCAATATACACAAGTAGCTAAGAAAA  349

seq1  GTTGGTTGTACTCATAGGTTCTTATGTCTTGAAAATGGGAACAGATTTGG  377
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTTGTACTCATAGGTTCTTATGTCTTGAAAATGGGAACAGATTTGG  399

seq1  AAAATAAAAAGTTGGTATTTATCACATCAAATGTGTAGAGAATAGAGTGT  427
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAAAGTTGGTATTTATCACATCAAATGTGTAGAGAATAGAGTGT  449

seq1  AAGTGATACTAGGCATATTTTCCATGCTTTGTAATTTGATTTTACACAAC  477
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATACTAGGCATATTTTCCATGCTTTGTAATTTGATTTTACACAAC  499

seq1  ATCCTTCTAAACATACAGTAAACTTGGTAATACAATCTCTTTTTACTAAC  527
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTCTAAACATACAGTAAACTTGGTAATACAATCTCTTTTTACTAAC  549

seq1  AAAACACTAAAATAACAAAAGCTTATTTTCTACCAAAACTGCAAAGCTAG  577
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACTAAAATAACAAAAGCTTATTTTCTACCAAAACTGCAAAGCTAG  599

seq1  AGACGAGCTCACCAGGAAGTACATTGTGTTATGAAAGCATAGAAATAAAG  627
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGAGCTCACCAGGAAGTACATTGTGTTATGAAAGCATAGAAATAAAG  649

seq1  GAAGTCAATCTATACCAAGGGCAAATCTGAAAGGCAAATAGAACACTGCT  677
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAATCTATACCAAGGGCAAATCTGAAAGGCAAATAGAACACTGCT  699

seq1  TTGTAGGCAAAAGGAAAACAGGTTCAGAATAAAGCAAGAGCTTGAGAGAT  727
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGGCAAAAGGAAAACAGGTTCAGAATAAAGCAAGAGCTTGAGAGAT  749

seq1  AAGCCAGCAATGGCCAGAAATAGAACTGAGAGAACAGGTGAAACAAGGCT  777
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGCAATGGCCAGAAATAGAACTGAGAGAACAGGTGAAACAAGGCT  799

seq1  CTATGGACTTTTGTGAGCTAGCCTGGGGAACACAGAGAAGAATGGACAGC  827
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGACTTTTGTGAGCTAGCCTGGGGAACACAGAGAAGAATGGACAGC  849

seq1  ATCTGTAAACCAGATAAATAGCAAGATCCAATATTGATAGAAACAAATCT  877
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAAACCAGATAAATAGCAAGATCCAATATTGATAGAAACAAATCT  899

seq1  CTGGAGGGTGAAAAAAAATAGAATACAGGTAGGAGCTACAGAAGGCCTAT  927
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGGTGAAAAAAAATAGAATACAGGTAGGAGCTACAGAAGGCCTAT  949

seq1  GGAGTAAAGTGAGAAAGAAGTAAGTTTTTAGAAATGTGCCTTGTCAAAAG  977
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTAAAGTGAGAAAGAAGTAAGTTTTTAGAAATGTGCCTTGTCAAAAG  999

seq1  ACAACATCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTT  1027
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTT  1049

seq1  ACCTATTCTAAATCAGATAGGGGACTAATATCCAATATATATAAAGAACT  1077
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATTCTAAATCAGATAGGGGACTAATATCCAATATATATAAAGAACT  1099

seq1  CAAGAAGGTGAACTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCT  1127
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAGGTGAACTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCT  1149

seq1  CAGAACTGAACAAAGAATTC  1147
      ||||||||||||||||||||
seq2  CAGAACTGAACAAAGAATTC  1169