BAC Information

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BAC

Clone NameB6Ng01-313E14
Chromosome15 (Build37)
Map Location 55,034,076 - 55,035,208
singlet/doubletsinglet
Overlap geneDepdc6
Upstream geneTnfrsf11b, LOC665280, EG383032, Colec10, Mal2, Nov, LOC665302, LOC100039816, Enpp2, LOC100039911, LOC100039822, Taf2, 2600005O03Rik
Downstream geneCol14a1, Mrpl13, Mtbp, Sntb1, LOC665348, LOC100039908, Hba-ps3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313E14.bB6Ng01-313E14.g
ACCGA104542GA104543
length1,1171,186
definitionB6Ng01-313E14.b B6Ng01-313E14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctgatagttctgcatgctctcggacccatctgataccagcaca
gtacaatgtagactgagaaacaaaccaagcaacttgccataggagtatcc
ccaaacctggcttccgtgtgcatagccacacttttgcataaatctgtaaa
acataaattagtttgtgtgatcttgttttcagtttgctgatttaaaaaaa
aaatccccatggtaactctcacaacagtattttgaattacgacctgcaca
tagactaatacctactgcttactgctttcccttggcatggtgaattatat
gaaacattaaccgtgctatgattacaaccagagagcagcagtctcagtat
aacagattccacaataggttgtagcagtattgtatggaattctttgctct
gggcttgacatgacattggccatcatgggcacagtagctttgataatcta
gcagacacctctgccttcagaacgatacagcagacagctagttagccaat
gggagtggagctcccttgctgtagggtgagagtcatgagatcatcataat
ccctcttatgcttttctgaggttttatgcactactccttcctgttcatat
atgtgtgatctcaaaaatactaaagaataggaggagatagaaattcaatg
gggatgggaccctttggtggtatagcttgttcgtgggtcactcaggctcc
tggaaccccaacaggttcacttatttcaccaaggtaggcatggtaagttt
cttaggtttctctgttcctggtctatttgagataaacagctatttctctt
ctgcctctccagggaggtcttacaacagttcatcacaaggatttttcaga
atgattcagaggtagaacatttgcctagcattgacaaggctcctcactgg
acatgtttagggtcctggtatatctctgggccctaagaaaagtttcaaac
caatgaaaatatatatgtcaatttatagccagatatgatagcagattcga
tagatctagtacttggagtgagatgcagactttttagcagtttgagccat
ctggtctaaaagcagtggtagcagcaaggggatgggatataagacagctg
aattccaataaaactaa
gaattcccagtccacactggagaaattaagaaagggaaagaagctaccaa
gaaggaaagacaaaatgaaatgtcgctgtttgctgttcacacaaacctag
acagggaaggctgtaataaatatagatgcatgtgcacatgaacacaggcc
tgcatgcaaacacatatgcataattagaacatgcataattaatcaatgaa
catagtaaaaccaaaggctacacattaacggtactgtttctacactagcc
aaaaactatccaaaaaagaaatcaaaagaaaagtctcatcgatgataata
actaaaacaaaatgttcagcaataaatttacccaaggatataaaagaccc
acacacagtaaaactacaaaccactgatgagggaaaccaaaggcacaaat
aaatggtgatatttcatgtttataaacataaagaattaatagctcaaatg
ttcgtgctactaaaattgatgtccaaatttagtacagtgcccatggaaat
tctaataccagttttgaaataaacaccccactccttaaattacatatgga
accaaccacaaaagaaacccatcagtccaggtgatcataaaaaaacacac
acacactcatacacactcatacacaaatacacatatacacataatataca
cacacagcacgaggacatattacccttcaaactatactgcaaagctatga
ataattagtatataacactgacacatcaaccaacaaaacagaacagaggg
cccagaaataaatgcatgcatgtgtactcagtagatttccagcaaatata
ccaggaacacagaatgacagcctcttcagtacatggtagtgaaagctgga
attctacatgcaagagaatgagagaggatttaacggtctcacaccatata
taaattcaactcaagtcagaatgaactttctggacttagaagtccagaaa
ctaaaagcactatcaggacacaggatagagaagctcacatgacacagggg
tggtgcatgactgttttttaggcacaagaatacaagaacagcgggccttg
gtgggcttaattccaggcactggggaagcagagcaggcgatccttgagta
atgccagtctgtctacagatggtgattccaggacgctagctacggtcaat
cctagtaataattataaagaatcgctcagggataca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_55034076_55035208
seq2: B6Ng01-313E14.b_46_1162 (reverse)

seq1  TTAGTTTTATTTGAAATCAGGCTGTCTTTATATCCCATCCCCCTGGCTGG  50
      ||||||||||| ||| ||| |||||| ||||||||||| ||||| |||| 
seq2  TTAGTTTTATTGGAATTCA-GCTGTC-TTATATCCCAT-CCCCTTGCTG-  46

seq1  CCTACAACTTGCTTTTTAGACCAGATTGGCCTCAAACTTGCTAAAAAGTC  100
       |||| || ||| |||||||||||||  | ||||||| ||||||||||||
seq2  -CTACCAC-TGC-TTTTAGACCAGAT--GGCTCAAAC-TGCTAAAAAGTC  90

seq1  TGCCATCTCCACTTCCAAGTACTAGGATCTATCGAAATCTGCTATCATAT  150
      || ||||| ||| ||||||||||| ||||||||| |||||||||||||||
seq2  TG-CATCT-CAC-TCCAAGTACTA-GATCTATCG-AATCTGCTATCATAT  135

seq1  CTGGCTATAAATTGACATTATATATTTTCATTGGTTTGAAACTTTTCTTA  200
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTGGCTATAAATTGACA-TATATATTTTCATTGGTTTGAAACTTTTCTTA  184

seq1  GGG-CCAGAGATTATACCAGGACCCTAAACATGTCCAGTGAGGAGCCTTG  249
      ||| ||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCAGAGA-TATACCAGGACCCTAAACATGTCCAGTGAGGAGCCTTG  233

seq1  TCAATGCTAGGCAAATGTTCTACCTCTGAATCATTCTGAAAAATCCTTGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGCTAGGCAAATGTTCTACCTCTGAATCATTCTGAAAAATCCTTGT  283

seq1  GATGAACTGTTGTAAGACCTCCCTGGAGAGGCAGAAGAGAAATAGCTGTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAACTGTTGTAAGACCTCCCTGGAGAGGCAGAAGAGAAATAGCTGTT  333

seq1  TATCTCAAATAGACCAGGAACAGAGAAACCTAAGAAACTTACCATGCCTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCAAATAGACCAGGAACAGAGAAACCTAAGAAACTTACCATGCCTA  383

seq1  CCTTGGTGAAATAAGTGAACCTGTTGGGGTTCCAGGAGCCTGAGTGACCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGTGAAATAAGTGAACCTGTTGGGGTTCCAGGAGCCTGAGTGACCC  433

seq1  ACGAACAAGCTATACCACCAAAGGGTCCCATCCCCATTGAATTTCTATCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAACAAGCTATACCACCAAAGGGTCCCATCCCCATTGAATTTCTATCT  483

seq1  CCTCCTATTCTTTAGTATTTTTGAGATCACACATATATGAACAGGAAGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTATTCTTTAGTATTTTTGAGATCACACATATATGAACAGGAAGGA  533

seq1  GTAGTGCATAAAACCTCAGAAAAGCATAAGAGGGATTATGATGATCTCAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGCATAAAACCTCAGAAAAGCATAAGAGGGATTATGATGATCTCAT  583

seq1  GACTCTCACCCTACAGCAAGGGAGCTCCACTCCCATTGGCTAACTAGCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTCACCCTACAGCAAGGGAGCTCCACTCCCATTGGCTAACTAGCTG  633

seq1  TCTGCTGTATCGTTCTGAAGGCAGAGGTGTCTGCTAGATTATCAAAGCTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGTATCGTTCTGAAGGCAGAGGTGTCTGCTAGATTATCAAAGCTA  683

seq1  CTGTGCCCATGATGGCCAATGTCATGTCAAGCCCAGAGCAAAGAATTCCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCCCATGATGGCCAATGTCATGTCAAGCCCAGAGCAAAGAATTCCA  733

seq1  TACAATACTGCTACAACCTATTGTGGAATCTGTTATACTGAGACTGCTGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATACTGCTACAACCTATTGTGGAATCTGTTATACTGAGACTGCTGC  783

seq1  TCTCTGGTTGTAATCATAGCACGGTTAATGTTTCATATAATTCACCATGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGTTGTAATCATAGCACGGTTAATGTTTCATATAATTCACCATGC  833

seq1  CAAGGGAAAGCAGTAAGCAGTAGGTATTAGTCTATGTGCAGGTCGTAATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGAAAGCAGTAAGCAGTAGGTATTAGTCTATGTGCAGGTCGTAATT  883

seq1  CAAAATACTGTTGTGAGAGTTACCATGGGGATTTTTTTTTTAAATCAGCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATACTGTTGTGAGAGTTACCATGGGGATTTTTTTTTTAAATCAGCA  933

seq1  AACTGAAAACAAGATCACACAAACTAATTTATGTTTTACAGATTTATGCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAAACAAGATCACACAAACTAATTTATGTTTTACAGATTTATGCA  983

seq1  AAAGTGTGGCTATGCACACGGAAGCCAGGTTTGGGGATACTCCTATGGCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTGGCTATGCACACGGAAGCCAGGTTTGGGGATACTCCTATGGCA  1033

seq1  AGTTGCTTGGTTTGTTTCTCAGTCTACATTGTACTGTGCTGGTATCAGAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCTTGGTTTGTTTCTCAGTCTACATTGTACTGTGCTGGTATCAGAT  1083

seq1  GGGTCCGAGAGCATGCAGAACTATCAGGGAATTC  1133
      ||||||||||||||||||||||||||||||||||
seq2  GGGTCCGAGAGCATGCAGAACTATCAGGGAATTC  1117